RNA–Protein interactions for RNA: ENST00000538570.5

COL4A6-208, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-208ENST00000538570 DACH2Q96NX9 599 aa10.6□□□□□ -0.71
COL4A6-208ENST00000538570 POLE3Q9NRF9 147 aa10.6□□□□□ -0.71
COL4A6-208ENST00000538570 SERPINB13Q9UIV8 391 aa10.6□□□□□ -0.71
COL4A6-208ENST00000538570 PNMA6FA0A0J9YX94 578 aa10.59□□□□□ -0.71
COL4A6-208ENST00000538570 GMNCA6NCL1 334 aa10.59□□□□□ -0.71
COL4A6-208ENST00000538570 TMCC1O94876 653 aa10.59□□□□□ -0.71
COL4A6-208ENST00000538570 CAPN1P07384 714 aa10.59□□□□□ -0.71
COL4A6-208ENST00000538570 CTTNQ14247 550 aaKnown RBP10.59□□□□□ -0.71
COL4A6-208ENST00000538570 INAQ16352 499 aa10.59□□□□□ -0.71
COL4A6-208ENST00000538570 USPL1Q5W0Q7 1092 aa10.59□□□□□ -0.71
COL4A6-208ENST00000538570 PDXDC2PQ6P474 469 aa10.59□□□□□ -0.71
COL4A6-208ENST00000538570 USP17L2Q6R6M4 530 aa10.59□□□□□ -0.71
COL4A6-208ENST00000538570 FAM47EQ6ZV65 393 aa10.59□□□□□ -0.71
COL4A6-208ENST00000538570 MTBPQ96DY7 904 aa10.59□□□□□ -0.71
COL4A6-208ENST00000538570 DNAJC12Q9UKB3 198 aa10.59□□□□□ -0.71
COL4A6-208ENST00000538570 K7ERI5 159 aa10.59□□□□□ -0.71
COL4A6-208ENST00000538570 SERPINB2P05120 415 aa10.59□□□□□ -0.71
COL4A6-208ENST00000538570 HDAC4P56524 1084 aa10.59□□□□□ -0.71
COL4A6-208ENST00000538570 TFDP2Q14188 446 aa10.59□□□□□ -0.71
COL4A6-208ENST00000538570 CCDC80Q76M96 950 aa10.59□□□□□ -0.71
COL4A6-208ENST00000538570 SZRD1Q7Z422 152 aa10.59□□□□□ -0.71
COL4A6-208ENST00000538570 OR6B3Q8NGW1 331 aa10.59□□□□□ -0.71
COL4A6-208ENST00000538570 LZICQ8WZA0 190 aa10.59□□□□□ -0.71
COL4A6-208ENST00000538570 NAF1Q96HR8 494 aaKnown RBP10.59□□□□□ -0.71
COL4A6-208ENST00000538570 MMTAG2Q9BU76 263 aaKnown RBP10.59□□□□□ -0.71
COL4A6-208ENST00000538570 FSD1LQ9BXM9 530 aa10.59□□□□□ -0.71
COL4A6-208ENST00000538570 DHX36Q9H2U1 1008 aaKnown RBP10.59□□□□□ -0.71
COL4A6-208ENST00000538570 ADAM22Q9P0K1 906 aa10.59□□□□□ -0.71
COL4A6-208ENST00000538570 MBD5Q9P267 1494 aa10.59□□□□□ -0.71
COL4A6-208ENST00000538570 TSPAN9O75954 239 aa10.59□□□□□ -0.71
COL4A6-208ENST00000538570 SRGAP2CP0DJJ0 459 aa10.59□□□□□ -0.71
COL4A6-208ENST00000538570 PMS2P54278 862 aa10.59□□□□□ -0.71
COL4A6-208ENST00000538570 EFTUD2Q15029 972 aaKnown RBP eCLIP10.59□□□□□ -0.71
COL4A6-208ENST00000538570 RESP18Q5W5W9 173 aa10.59□□□□□ -0.71
COL4A6-208ENST00000538570 ARHGAP27Q6ZUM4 889 aa10.59□□□□□ -0.71
COL4A6-208ENST00000538570 TOGARAM2Q6ZUX3 1019 aa10.59□□□□□ -0.71
COL4A6-208ENST00000538570 STAMBPL1Q96FJ0 436 aa10.59□□□□□ -0.71
COL4A6-208ENST00000538570 PAWRQ96IZ0 340 aaKnown RBP10.59□□□□□ -0.71
COL4A6-208ENST00000538570 OSBPL9Q96SU4 736 aa10.59□□□□□ -0.71
COL4A6-208ENST00000538570 SH3GLB2Q9NR46 395 aa10.59□□□□□ -0.71
COL4A6-208ENST00000538570 ASNSD1Q9NWL6 643 aa10.59□□□□□ -0.71
COL4A6-208ENST00000538570 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.59□□□□□ -0.71
COL4A6-208ENST00000538570 CNOT8Q9UFF9 292 aaKnown RBP10.59□□□□□ -0.71
COL4A6-208ENST00000538570 ZNF229Q9UJW7 825 aa10.59□□□□□ -0.71
COL4A6-208ENST00000538570 HADHAP40939 763 aa10.59□□□□□ -0.71
COL4A6-208ENST00000538570 BAG6P46379 1132 aa10.59□□□□□ -0.71
COL4A6-208ENST00000538570 TRPC1P48995 793 aa10.59□□□□□ -0.71
COL4A6-208ENST00000538570 AARSP49588 968 aaKnown RBP eCLIP10.59□□□□□ -0.71
COL4A6-208ENST00000538570 PPP6R3Q5H9R7 873 aaPredicted RBP10.59□□□□□ -0.71
COL4A6-208ENST00000538570 OR9Q1Q8NGQ5 310 aa10.59□□□□□ -0.71
COL4A6-208ENST00000538570 MPP4Q96JB8 637 aa10.59□□□□□ -0.71
COL4A6-208ENST00000538570 EDEM3Q9BZQ6 932 aa10.59□□□□□ -0.71
COL4A6-208ENST00000538570 CYP26B1Q9NR63 512 aa10.59□□□□□ -0.71
COL4A6-208ENST00000538570 SMARCA1P28370 1054 aa10.59□□□□□ -0.71
COL4A6-208ENST00000538570 GPC5P78333 572 aa10.59□□□□□ -0.71
COL4A6-208ENST00000538570 CC2D2BQ6DHV5 1058 aa10.59□□□□□ -0.71
COL4A6-208ENST00000538570 TMC4Q7Z404 712 aa10.59□□□□□ -0.71
COL4A6-208ENST00000538570 FAM160B2Q86V87 743 aa10.59□□□□□ -0.71
COL4A6-208ENST00000538570 IFT43Q96FT9 208 aa10.59□□□□□ -0.71
COL4A6-208ENST00000538570 BTBD6Q96KE9 485 aa10.59□□□□□ -0.71
COL4A6-208ENST00000538570 GCOM2Q9BZD3 368 aaPredicted RBP10.59□□□□□ -0.71
COL4A6-208ENST00000538570 VPS11Q9H270 941 aa10.59□□□□□ -0.71
COL4A6-208ENST00000538570 MAGI3Q5TCQ9 1506 aa10.59□□□□□ -0.71
COL4A6-208ENST00000538570 PRKAB2O43741 272 aa10.58□□□□□ -0.71
COL4A6-208ENST00000538570 BNIP3LO60238 219 aa10.58□□□□□ -0.71
COL4A6-208ENST00000538570 KRT4P19013 534 aa10.58□□□□□ -0.71
COL4A6-208ENST00000538570 NAA30Q147X3 362 aaPredicted RBP10.58□□□□□ -0.71
COL4A6-208ENST00000538570 ARHGEF6Q15052 776 aa10.58□□□□□ -0.71
COL4A6-208ENST00000538570 ZNF667Q5HYK9 610 aa10.58□□□□□ -0.71
COL4A6-208ENST00000538570 ANO5Q75V66 913 aa10.58□□□□□ -0.71
COL4A6-208ENST00000538570 TTC8Q8TAM2 541 aa10.58□□□□□ -0.71
COL4A6-208ENST00000538570 PPP1R16BQ96T49 567 aa10.58□□□□□ -0.71
COL4A6-208ENST00000538570 CCDC90BQ9GZT6 254 aa10.58□□□□□ -0.71
COL4A6-208ENST00000538570 ABHD10Q9NUJ1 306 aa10.58□□□□□ -0.71
COL4A6-208ENST00000538570 ZSWIM5Q9P217 1185 aa10.58□□□□□ -0.71
COL4A6-208ENST00000538570 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.58□□□□□ -0.72
COL4A6-208ENST00000538570 RNF103-CHMP3A0A140T963 221 aa10.58□□□□□ -0.72
COL4A6-208ENST00000538570 ST13P50502 369 aaKnown RBP10.58□□□□□ -0.72
COL4A6-208ENST00000538570 MAGOHP61326 146 aaKnown RBP10.58□□□□□ -0.72
COL4A6-208ENST00000538570 PPP2R2AP63151 447 aa10.58□□□□□ -0.72
COL4A6-208ENST00000538570 MRPS25P82663 173 aaKnown RBP10.58□□□□□ -0.72
COL4A6-208ENST00000538570 DAB2P98082 770 aa10.58□□□□□ -0.72
COL4A6-208ENST00000538570 KCNA1Q09470 495 aa10.58□□□□□ -0.72
COL4A6-208ENST00000538570 UNC13DQ70J99 1090 aa10.58□□□□□ -0.72
COL4A6-208ENST00000538570 NR1H4Q96RI1 486 aaPredicted RBP10.58□□□□□ -0.72
COL4A6-208ENST00000538570 STX18Q9P2W9 335 aaKnown RBP10.58□□□□□ -0.72
COL4A6-208ENST00000538570 NBNO60934 754 aa10.58□□□□□ -0.72
COL4A6-208ENST00000538570 ATP1A3P13637 1013 aa10.58□□□□□ -0.72
COL4A6-208ENST00000538570 PEX3P56589 373 aa10.58□□□□□ -0.72
COL4A6-208ENST00000538570 MECOMQ03112 1051 aa10.58□□□□□ -0.72
COL4A6-208ENST00000538570 SUPT20HL1Q3ZLR7 823 aa10.58□□□□□ -0.72
COL4A6-208ENST00000538570 TRAF7Q6Q0C0 670 aa10.58□□□□□ -0.72
COL4A6-208ENST00000538570 ZBED2Q9BTP6 218 aa10.58□□□□□ -0.72
COL4A6-208ENST00000538570 ANTXR1Q9H6X2 564 aa10.58□□□□□ -0.72
COL4A6-208ENST00000538570 TRIM45Q9H8W5 580 aaPredicted RBP10.58□□□□□ -0.72
COL4A6-208ENST00000538570 DDX42Q86XP3 938 aaKnown RBP eCLIP10.58□□□□□ -0.72
COL4A6-208ENST00000538570 ICA1LQ8NDH6 482 aa10.58□□□□□ -0.72
COL4A6-208ENST00000538570 ASPSCR1Q9BZE9 553 aa10.58□□□□□ -0.72
COL4A6-208ENST00000538570 PUS7LQ9H0K6 701 aaKnown RBP10.58□□□□□ -0.72
COL4A6-208ENST00000538570 ITM2BQ9Y287 266 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms