RNA–Protein interactions for RNA: ENST00000536843.5

CHFR-213, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,424 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-213ENST00000536843 ZNF287Q9HBT7 754 aa16.86■□□□□ 0.29
CHFR-213ENST00000536843 SUCLA2Q9P2R7 463 aaPredicted RBP16.86■□□□□ 0.29
CHFR-213ENST00000536843 NKX1-2Q9UD57 310 aaPredicted RBP16.86■□□□□ 0.29
CHFR-213ENST00000536843 PNMA3Q9UL41 463 aa16.86■□□□□ 0.29
CHFR-213ENST00000536843 TTC7AQ9ULT0 858 aaPredicted RBP16.86■□□□□ 0.29
CHFR-213ENST00000536843 STXBP5LQ9Y2K9 1186 aa16.86■□□□□ 0.29
CHFR-213ENST00000536843 SNED1Q8TER0 1413 aa16.86■□□□□ 0.29
CHFR-213ENST00000536843 ATP8B3O60423 1300 aa16.86■□□□□ 0.29
CHFR-213ENST00000536843 NAV1Q8NEY1 1877 aa16.86■□□□□ 0.29
CHFR-213ENST00000536843 ACADSP16219 412 aa16.86■□□□□ 0.29
CHFR-213ENST00000536843 POLR2FP61218 127 aaKnown RBP16.86■□□□□ 0.29
CHFR-213ENST00000536843 DUPD1Q68J44 220 aa16.86■□□□□ 0.29
CHFR-213ENST00000536843 USP17L2Q6R6M4 530 aa16.86■□□□□ 0.29
CHFR-213ENST00000536843 ARHGAP22Q7Z5H3 698 aa16.86■□□□□ 0.29
CHFR-213ENST00000536843 LZTS2Q9BRK4 669 aa16.86■□□□□ 0.29
CHFR-213ENST00000536843 TRIM51Q9BSJ1 452 aa16.86■□□□□ 0.29
CHFR-213ENST00000536843 GOLPH3Q9H4A6 298 aa16.86■□□□□ 0.29
CHFR-213ENST00000536843 PRKAG3Q9UGI9 489 aa16.86■□□□□ 0.29
CHFR-213ENST00000536843 TLDC2A0PJX2 215 aa16.85■□□□□ 0.29
CHFR-213ENST00000536843 TTC36A6NLP5 189 aa16.85■□□□□ 0.29
CHFR-213ENST00000536843 EIF4E1BA6NMX2 242 aaKnown RBP16.85■□□□□ 0.29
CHFR-213ENST00000536843 BBOX1O75936 387 aa16.85■□□□□ 0.29
CHFR-213ENST00000536843 APBA3O96018 575 aa16.85■□□□□ 0.29
CHFR-213ENST00000536843 HOXA7P31268 230 aaPredicted RBP16.85■□□□□ 0.29
CHFR-213ENST00000536843 PCK1P35558 622 aa16.85■□□□□ 0.29
CHFR-213ENST00000536843 KLRC3Q07444 240 aa16.85■□□□□ 0.29
CHFR-213ENST00000536843 PARP6Q2NL67 630 aa16.85■□□□□ 0.29
CHFR-213ENST00000536843 GALNT17Q6IS24 598 aa16.85■□□□□ 0.29
CHFR-213ENST00000536843 MAEAQ7L5Y9 396 aa16.85■□□□□ 0.29
CHFR-213ENST00000536843 TAOK1Q7L7X3 1001 aa16.85■□□□□ 0.29
CHFR-213ENST00000536843 PROM2Q8N271 834 aa16.85■□□□□ 0.29
CHFR-213ENST00000536843 TPCN2Q8NHX9 752 aa16.85■□□□□ 0.29
CHFR-213ENST00000536843 LSM14BQ9BX40 385 aaKnown RBP16.85■□□□□ 0.29
CHFR-213ENST00000536843 TANGO6Q9C0B7 1094 aa16.85■□□□□ 0.29
CHFR-213ENST00000536843 FGFR1OP2Q9NVK5 253 aa16.85■□□□□ 0.29
CHFR-213ENST00000536843 TRIM33Q9UPN9 1127 aa16.85■□□□□ 0.29
CHFR-213ENST00000536843 C6orf229H3BNL8 230 aa16.85■□□□□ 0.29
CHFR-213ENST00000536843 KLC1Q07866 573 aa16.85■□□□□ 0.29
CHFR-213ENST00000536843 CUL3Q13618 768 aa16.85■□□□□ 0.29
CHFR-213ENST00000536843 RAPGEF1Q13905 1077 aa16.85■□□□□ 0.29
CHFR-213ENST00000536843 ASIC2Q16515 512 aa16.85■□□□□ 0.29
CHFR-213ENST00000536843 SPATA21Q7Z572 469 aa16.85■□□□□ 0.29
CHFR-213ENST00000536843 STK32AQ8WU08 396 aa16.85■□□□□ 0.29
CHFR-213ENST00000536843 UTP4Q969X6 686 aaKnown RBP16.85■□□□□ 0.29
CHFR-213ENST00000536843 MYH4Q9Y623 1939 aa16.84■□□□□ 0.29
CHFR-213ENST00000536843 PVALEFA0A1B0GWK0 134 aa16.84■□□□□ 0.29
CHFR-213ENST00000536843 PEX11AO75192 247 aa16.84■□□□□ 0.29
CHFR-213ENST00000536843 UNC5CO95185 931 aa16.84■□□□□ 0.29
CHFR-213ENST00000536843 PYGLP06737 847 aa16.84■□□□□ 0.29
CHFR-213ENST00000536843 PLCG2P16885 1265 aa16.84■□□□□ 0.29
CHFR-213ENST00000536843 SP100P23497 879 aaPredicted RBP16.84■□□□□ 0.29
CHFR-213ENST00000536843 RBM5P52756 815 aaKnown RBP eCLIP16.84■□□□□ 0.29
CHFR-213ENST00000536843 PTENP60484 403 aa16.84■□□□□ 0.29
CHFR-213ENST00000536843 CCDC15Q0P6D6 951 aa16.84■□□□□ 0.29
CHFR-213ENST00000536843 PPP2R5EQ16537 467 aa16.84■□□□□ 0.29
CHFR-213ENST00000536843 UNC13DQ70J99 1090 aa16.84■□□□□ 0.29
CHFR-213ENST00000536843 KLHL23Q8NBE8 558 aa16.84■□□□□ 0.29
CHFR-213ENST00000536843 IFT43Q96FT9 208 aa16.84■□□□□ 0.29
CHFR-213ENST00000536843 CEP95Q96GE4 821 aa16.84■□□□□ 0.29
CHFR-213ENST00000536843 FAM163AQ96GL9 167 aaPredicted RBP16.84■□□□□ 0.29
CHFR-213ENST00000536843 ERP44Q9BS26 406 aa16.84■□□□□ 0.29
CHFR-213ENST00000536843 SPZ1Q9BXG8 430 aa16.84■□□□□ 0.29
CHFR-213ENST00000536843 VAT1LQ9HCJ6 419 aa16.84■□□□□ 0.29
CHFR-213ENST00000536843 TPBGLP0DKB5 382 aa16.84■□□□□ 0.29
CHFR-213ENST00000536843 PEX5P50542 639 aa16.84■□□□□ 0.29
CHFR-213ENST00000536843 NAPAP54920 295 aa16.84■□□□□ 0.29
CHFR-213ENST00000536843 SLC29A2Q14542 456 aa16.84■□□□□ 0.29
CHFR-213ENST00000536843 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.84■□□□□ 0.29
CHFR-213ENST00000536843 PEX26Q7Z412 305 aa16.84■□□□□ 0.29
CHFR-213ENST00000536843 ENDOVQ8N8Q3 282 aaKnown RBP16.84■□□□□ 0.29
CHFR-213ENST00000536843 FAM133AQ8N9E0 248 aa16.84■□□□□ 0.29
CHFR-213ENST00000536843 TRIM4Q9C037 500 aa16.84■□□□□ 0.29
CHFR-213ENST00000536843 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.84■□□□□ 0.29
CHFR-213ENST00000536843 CYP39A1Q9NYL5 469 aa16.84■□□□□ 0.29
CHFR-213ENST00000536843 ZMYND8Q9ULU4 1186 aaPredicted RBP16.84■□□□□ 0.29
CHFR-213ENST00000536843 UBR3Q6ZT12 1888 aa16.83■□□□□ 0.29
CHFR-213ENST00000536843 TCP11X1B4DZS4 312 aa16.83■□□□□ 0.28
CHFR-213ENST00000536843 RAD23BP54727 409 aa16.83■□□□□ 0.28
CHFR-213ENST00000536843 DRG2P55039 364 aaKnown RBP16.83■□□□□ 0.28
CHFR-213ENST00000536843 RNF43Q68DV7 783 aa16.83■□□□□ 0.28
CHFR-213ENST00000536843 MFSD5Q6N075 450 aa16.83■□□□□ 0.28
CHFR-213ENST00000536843 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.83■□□□□ 0.28
CHFR-213ENST00000536843 FAM81AQ8TBF8 368 aa16.83■□□□□ 0.28
CHFR-213ENST00000536843 TRAPPC9Q96Q05 1148 aa16.83■□□□□ 0.28
CHFR-213ENST00000536843 TRIM31Q9BZY9 425 aa16.83■□□□□ 0.28
CHFR-213ENST00000536843 GOPCQ9HD26 462 aa16.83■□□□□ 0.28
CHFR-213ENST00000536843 RIC8AQ9NPQ8 531 aa16.83■□□□□ 0.28
CHFR-213ENST00000536843 GAKO14976 1311 aa16.83■□□□□ 0.28
CHFR-213ENST00000536843 FAM187AA6NFU0 413 aa16.82■□□□□ 0.28
CHFR-213ENST00000536843 PDLIM1O00151 329 aa16.82■□□□□ 0.28
CHFR-213ENST00000536843 HOXA10P31260 410 aaPredicted RBP16.82■□□□□ 0.28
CHFR-213ENST00000536843 TMEM154Q6P9G4 183 aa16.82■□□□□ 0.28
CHFR-213ENST00000536843 SDCCAG8Q86SQ7 713 aaPredicted RBP16.82■□□□□ 0.28
CHFR-213ENST00000536843 DAAM2Q86T65 1068 aa16.82■□□□□ 0.28
CHFR-213ENST00000536843 PIGOQ8TEQ8 1089 aa16.82■□□□□ 0.28
CHFR-213ENST00000536843 DTNBP1Q96EV8 351 aa16.82■□□□□ 0.28
CHFR-213ENST00000536843 HES6Q96HZ4 224 aa16.82■□□□□ 0.28
CHFR-213ENST00000536843 RBM41Q96IZ5 413 aaKnown RBP16.82■□□□□ 0.28
CHFR-213ENST00000536843 TSG101Q99816 390 aa16.82■□□□□ 0.28
CHFR-213ENST00000536843 PAIP2Q9BPZ3 127 aaKnown RBP16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms