RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 INTS4Q96HW7 963 aaKnown RBP14.66□□□□□ -0.06
PRKDC-206ENST00000536429 NACC1Q96RE7 527 aa14.66□□□□□ -0.06
PRKDC-206ENST00000536429 MMTAG2Q9BU76 263 aaKnown RBP14.66□□□□□ -0.06
PRKDC-206ENST00000536429 C1orf112Q9NSG2 853 aa14.66□□□□□ -0.06
PRKDC-206ENST00000536429 RNF19AQ9NV58 838 aa14.66□□□□□ -0.06
PRKDC-206ENST00000536429 PCDHB7Q9Y5E2 793 aa14.66□□□□□ -0.06
PRKDC-206ENST00000536429 GAS2O43903 313 aaKnown RBP14.65□□□□□ -0.06
PRKDC-206ENST00000536429 DGAT1O75907 488 aa14.65□□□□□ -0.06
PRKDC-206ENST00000536429 STAG3L1P0CL83 205 aa14.65□□□□□ -0.06
PRKDC-206ENST00000536429 XRCC6P12956 609 aaKnown RBP eCLIP14.65□□□□□ -0.06
PRKDC-206ENST00000536429 GLRA2P23416 452 aa14.65□□□□□ -0.06
PRKDC-206ENST00000536429 PRPHP41219 470 aa14.65□□□□□ -0.06
PRKDC-206ENST00000536429 CDC42EP1Q00587 391 aa14.65□□□□□ -0.06
PRKDC-206ENST00000536429 CAPSQ13938 189 aa14.65□□□□□ -0.06
PRKDC-206ENST00000536429 PDIA5Q14554 519 aa14.65□□□□□ -0.06
PRKDC-206ENST00000536429 FAM173BQ6P4H8 233 aa14.65□□□□□ -0.06
PRKDC-206ENST00000536429 DTHD1Q6ZMT9 781 aa14.65□□□□□ -0.06
PRKDC-206ENST00000536429 ECHDC2Q86YB7 292 aa14.65□□□□□ -0.06
PRKDC-206ENST00000536429 EXOC8Q8IYI6 725 aa14.65□□□□□ -0.06
PRKDC-206ENST00000536429 RNF149Q8NC42 400 aa14.65□□□□□ -0.06
PRKDC-206ENST00000536429 SNX29Q8TEQ0 813 aa14.65□□□□□ -0.06
PRKDC-206ENST00000536429 TCP11Q8WWU5 503 aa14.65□□□□□ -0.06
PRKDC-206ENST00000536429 CCDC43Q96MW1 224 aaKnown RBP14.65□□□□□ -0.06
PRKDC-206ENST00000536429 POLR3FQ9H1D9 316 aaPredicted RBP14.65□□□□□ -0.06
PRKDC-206ENST00000536429 POLD4Q9HCU8 107 aa14.65□□□□□ -0.06
PRKDC-206ENST00000536429 DBR1Q9UK59 544 aaKnown RBP14.65□□□□□ -0.06
PRKDC-206ENST00000536429 LRFN2Q9ULH4 789 aa14.65□□□□□ -0.06
PRKDC-206ENST00000536429 KIAA1024Q9UPX6 916 aa14.65□□□□□ -0.06
PRKDC-206ENST00000536429 VWA3AA6NCI4 1184 aa14.64□□□□□ -0.07
PRKDC-206ENST00000536429 LAD1O00515 517 aa14.64□□□□□ -0.07
PRKDC-206ENST00000536429 ZSCAN20P17040 1043 aaPredicted RBP14.64□□□□□ -0.07
PRKDC-206ENST00000536429 ATF7P17544 494 aaPredicted RBP14.64□□□□□ -0.07
PRKDC-206ENST00000536429 POU3F3P20264 500 aaPredicted RBP14.64□□□□□ -0.07
PRKDC-206ENST00000536429 SFPQP23246 707 aaKnown RBP eCLIP14.64□□□□□ -0.07
PRKDC-206ENST00000536429 CTNNB1P35222 781 aa14.64□□□□□ -0.07
PRKDC-206ENST00000536429 RESTQ13127 1097 aa14.64□□□□□ -0.07
PRKDC-206ENST00000536429 HAUS3Q68CZ6 603 aa14.64□□□□□ -0.07
PRKDC-206ENST00000536429 CATSPER4Q7RTX7 472 aa14.64□□□□□ -0.07
PRKDC-206ENST00000536429 KCNK18Q7Z418 384 aa14.64□□□□□ -0.07
PRKDC-206ENST00000536429 CMTR2Q8IYT2 770 aaKnown RBP14.64□□□□□ -0.07
PRKDC-206ENST00000536429 SLC17A8Q8NDX2 589 aa14.64□□□□□ -0.07
PRKDC-206ENST00000536429 CLP1Q92989 425 aaKnown RBP14.64□□□□□ -0.07
PRKDC-206ENST00000536429 DDX19AQ9NUU7 478 aaKnown RBP14.64□□□□□ -0.07
PRKDC-206ENST00000536429 TMEM161AQ9NX61 479 aa14.64□□□□□ -0.07
PRKDC-206ENST00000536429 MTMR6Q9Y217 621 aa14.64□□□□□ -0.07
PRKDC-206ENST00000536429 PIN4Q9Y237 131 aaKnown RBP14.64□□□□□ -0.07
PRKDC-206ENST00000536429 ARHGEF35A5YM69 484 aa14.63□□□□□ -0.07
PRKDC-206ENST00000536429 TBKBP1A7MCY6 615 aa14.63□□□□□ -0.07
PRKDC-206ENST00000536429 E9PMD0 336 aa14.63□□□□□ -0.07
PRKDC-206ENST00000536429 PDCP20941 246 aa14.63□□□□□ -0.07
PRKDC-206ENST00000536429 HOXA11P31270 313 aaPredicted RBP14.63□□□□□ -0.07
PRKDC-206ENST00000536429 BMPR1AP36894 532 aa14.63□□□□□ -0.07
PRKDC-206ENST00000536429 PTENP60484 403 aa14.63□□□□□ -0.07
PRKDC-206ENST00000536429 GRIN1Q05586 938 aa14.63□□□□□ -0.07
PRKDC-206ENST00000536429 GPM6BQ13491 265 aa14.63□□□□□ -0.07
PRKDC-206ENST00000536429 LONRF3Q496Y0 759 aa14.63□□□□□ -0.07
PRKDC-206ENST00000536429 CLLU1OSQ5K130 101 aa14.63□□□□□ -0.07
PRKDC-206ENST00000536429 PADI6Q6TGC4 694 aa14.63□□□□□ -0.07
PRKDC-206ENST00000536429 BRAPQ7Z569 592 aa14.63□□□□□ -0.07
PRKDC-206ENST00000536429 SRGAP1Q7Z6B7 1085 aa14.63□□□□□ -0.07
PRKDC-206ENST00000536429 ZNF598Q86UK7 904 aaKnown RBP14.63□□□□□ -0.07
PRKDC-206ENST00000536429 RNF169Q8NCN4 708 aa14.63□□□□□ -0.07
PRKDC-206ENST00000536429 BSNDQ8WZ55 320 aa14.63□□□□□ -0.07
PRKDC-206ENST00000536429 INO80BQ9C086 356 aaPredicted RBP14.63□□□□□ -0.07
PRKDC-206ENST00000536429 BHMT2Q9H2M3 363 aa14.63□□□□□ -0.07
PRKDC-206ENST00000536429 ELAC1Q9H777 363 aaKnown RBP14.63□□□□□ -0.07
PRKDC-206ENST00000536429 COL4A4P53420 1690 aaPredicted RBP14.62□□□□□ -0.07
PRKDC-206ENST00000536429 A0A0U1RQF3 1178 aa14.62□□□□□ -0.07
PRKDC-206ENST00000536429 MEIS3P2A8K0S8 358 aa14.62□□□□□ -0.07
PRKDC-206ENST00000536429 H3BNC9 293 aa14.62□□□□□ -0.07
PRKDC-206ENST00000536429 ASAP2O43150 1006 aa14.62□□□□□ -0.07
PRKDC-206ENST00000536429 GTPBP6O43824 516 aaPredicted RBP14.62□□□□□ -0.07
PRKDC-206ENST00000536429 CYP11B2P19099 503 aa14.62□□□□□ -0.07
PRKDC-206ENST00000536429 MUTP22033 750 aa14.62□□□□□ -0.07
PRKDC-206ENST00000536429 PHKA2P46019 1235 aa14.62□□□□□ -0.07
PRKDC-206ENST00000536429 MBTD1Q05BQ5 628 aa14.62□□□□□ -0.07
PRKDC-206ENST00000536429 MXD4Q14582 209 aaPredicted RBP14.62□□□□□ -0.07
PRKDC-206ENST00000536429 SF3A1Q15459 793 aaKnown RBP14.62□□□□□ -0.07
PRKDC-206ENST00000536429 ZRSR1Q15695 479 aaKnown RBP14.62□□□□□ -0.07
PRKDC-206ENST00000536429 AMHR2Q16671 573 aa14.62□□□□□ -0.07
PRKDC-206ENST00000536429 KRT79Q5XKE5 535 aa14.62□□□□□ -0.07
PRKDC-206ENST00000536429 TWF2Q6IBS0 349 aaKnown RBP14.62□□□□□ -0.07
PRKDC-206ENST00000536429 LRRC55Q6ZSA7 311 aa14.62□□□□□ -0.07
PRKDC-206ENST00000536429 HSCBQ8IWL3 235 aa14.62□□□□□ -0.07
PRKDC-206ENST00000536429 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.62□□□□□ -0.07
PRKDC-206ENST00000536429 LPPQ93052 612 aa14.62□□□□□ -0.07
PRKDC-206ENST00000536429 SAMD11Q96NU1 681 aa14.62□□□□□ -0.07
PRKDC-206ENST00000536429 CASD1Q96PB1 797 aa14.62□□□□□ -0.07
PRKDC-206ENST00000536429 PNMA5Q96PV4 448 aa14.62□□□□□ -0.07
PRKDC-206ENST00000536429 PLIN2Q99541 437 aa14.62□□□□□ -0.07
PRKDC-206ENST00000536429 RAB34Q9BZG1 259 aa14.62□□□□□ -0.07
PRKDC-206ENST00000536429 CHST12Q9NRB3 414 aa14.62□□□□□ -0.07
PRKDC-206ENST00000536429 AGPAT5Q9NUQ2 364 aa14.62□□□□□ -0.07
PRKDC-206ENST00000536429 CLIC4Q9Y696 253 aa14.62□□□□□ -0.07
PRKDC-206ENST00000536429 ARID2Q68CP9 1835 aa14.62□□□□□ -0.07
PRKDC-206ENST00000536429 C5orf67F2Z3F1 127 aa14.61□□□□□ -0.07
PRKDC-206ENST00000536429 GRM6O15303 877 aa14.61□□□□□ -0.07
PRKDC-206ENST00000536429 TSPAN1O60635 241 aa14.61□□□□□ -0.07
PRKDC-206ENST00000536429 CSPG5O95196 566 aa14.61□□□□□ -0.07
PRKDC-206ENST00000536429 UBXN11Q5T124 520 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms