RNA–Protein interactions for RNA: ENST00000535818.1

VPS37C-202, Transcript of VPS37C, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS37C, Length 865 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37C-202ENST00000535818 NT5C3AQ9H0P0 336 aa24.67■■□□□ 1.54
VPS37C-202ENST00000535818 PRDM12Q9H4Q4 367 aa24.67■■□□□ 1.54
VPS37C-202ENST00000535818 CERS4Q9HA82 394 aa24.67■■□□□ 1.54
VPS37C-202ENST00000535818 IFT122Q9HBG6 1241 aa24.67■■□□□ 1.54
VPS37C-202ENST00000535818 E9PMD0 336 aa24.66■■□□□ 1.54
VPS37C-202ENST00000535818 ARHGEF15O94989 841 aa24.66■■□□□ 1.54
VPS37C-202ENST00000535818 ZSCAN22P10073 491 aaPredicted RBP24.66■■□□□ 1.54
VPS37C-202ENST00000535818 ARL2P36404 184 aa24.66■■□□□ 1.54
VPS37C-202ENST00000535818 LONP1P36776 959 aaKnown RBP24.66■■□□□ 1.54
VPS37C-202ENST00000535818 UBA7P41226 1012 aa24.66■■□□□ 1.54
VPS37C-202ENST00000535818 SRGAP1Q7Z6B7 1085 aa24.66■■□□□ 1.54
VPS37C-202ENST00000535818 RASSF8Q8NHQ8 419 aa24.66■■□□□ 1.54
VPS37C-202ENST00000535818 ASAP3Q8TDY4 903 aa24.66■■□□□ 1.54
VPS37C-202ENST00000535818 GPRC5CQ9NQ84 441 aa24.66■■□□□ 1.54
VPS37C-202ENST00000535818 PCDHB7Q9Y5E2 793 aa24.66■■□□□ 1.54
VPS37C-202ENST00000535818 LINC01553A4QN01 128 aa24.65■■□□□ 1.54
VPS37C-202ENST00000535818 EYA4O95677 639 aa24.65■■□□□ 1.54
VPS37C-202ENST00000535818 CYP11B2P19099 503 aa24.65■■□□□ 1.54
VPS37C-202ENST00000535818 MARCKSP29966 332 aaPredicted RBP24.65■■□□□ 1.54
VPS37C-202ENST00000535818 TTC3P53804 2025 aa24.65■■□□□ 1.54
VPS37C-202ENST00000535818 DSC3Q14574 896 aa24.65■■□□□ 1.54
VPS37C-202ENST00000535818 PTPAQ15257 358 aa24.65■■□□□ 1.54
VPS37C-202ENST00000535818 ARNTL2Q8WYA1 636 aa24.65■■□□□ 1.54
VPS37C-202ENST00000535818 CALML4Q96GE6 196 aa24.65■■□□□ 1.54
VPS37C-202ENST00000535818 ZNF396Q96N95 335 aaPredicted RBP24.65■■□□□ 1.54
VPS37C-202ENST00000535818 USP28Q96RU2 1077 aa24.65■■□□□ 1.54
VPS37C-202ENST00000535818 GAS2L1Q99501 681 aaPredicted RBP24.65■■□□□ 1.54
VPS37C-202ENST00000535818 PLIN2Q99541 437 aa24.65■■□□□ 1.54
VPS37C-202ENST00000535818 PIN4Q9Y237 131 aaKnown RBP24.65■■□□□ 1.54
VPS37C-202ENST00000535818 C9IYK1 514 aa24.64■■□□□ 1.54
VPS37C-202ENST00000535818 FOSL2P15408 326 aa24.64■■□□□ 1.54
VPS37C-202ENST00000535818 GLRA2P23416 452 aa24.64■■□□□ 1.54
VPS37C-202ENST00000535818 CAPSQ13938 189 aa24.64■■□□□ 1.54
VPS37C-202ENST00000535818 HYIQ5T013 277 aa24.64■■□□□ 1.54
VPS37C-202ENST00000535818 SP7Q8TDD2 431 aaPredicted RBP24.64■■□□□ 1.54
VPS37C-202ENST00000535818 TGS1Q96RS0 853 aaKnown RBP24.64■■□□□ 1.54
VPS37C-202ENST00000535818 DACT1Q9NYF0 836 aa24.64■■□□□ 1.54
VPS37C-202ENST00000535818 MTUS1Q9ULD2 1270 aa24.64■■□□□ 1.54
VPS37C-202ENST00000535818 MYH15Q9Y2K3 1946 aa24.64■■□□□ 1.53
VPS37C-202ENST00000535818 ADGRA3Q8IWK6 1321 aa24.63■■□□□ 1.53
VPS37C-202ENST00000535818 LRRIQ4A6NIV6 560 aa24.63■■□□□ 1.53
VPS37C-202ENST00000535818 ERLIN2O94905 339 aa24.63■■□□□ 1.53
VPS37C-202ENST00000535818 F13A1P00488 732 aa24.63■■□□□ 1.53
VPS37C-202ENST00000535818 GRIN1Q05586 938 aa24.63■■□□□ 1.53
VPS37C-202ENST00000535818 GRB10Q13322 594 aa24.63■■□□□ 1.53
VPS37C-202ENST00000535818 FIBCD1Q8N539 461 aa24.63■■□□□ 1.53
VPS37C-202ENST00000535818 KCTD17Q8N5Z5 321 aa24.63■■□□□ 1.53
VPS37C-202ENST00000535818 PNMA5Q96PV4 448 aa24.63■■□□□ 1.53
VPS37C-202ENST00000535818 CHST12Q9NRB3 414 aa24.63■■□□□ 1.53
VPS37C-202ENST00000535818 STXBP5LQ9Y2K9 1186 aa24.63■■□□□ 1.53
VPS37C-202ENST00000535818 COL4A6Q14031 1691 aa24.62■■□□□ 1.53
VPS37C-202ENST00000535818 INO80B-WBP1J3KQ70 363 aa24.62■■□□□ 1.53
VPS37C-202ENST00000535818 SLC26A4O43511 780 aa24.62■■□□□ 1.53
VPS37C-202ENST00000535818 DGKIO75912 1065 aa24.62■■□□□ 1.53
VPS37C-202ENST00000535818 SSBP05455 408 aaKnown RBP eCLIP24.62■■□□□ 1.53
VPS37C-202ENST00000535818 PTENP60484 403 aa24.62■■□□□ 1.53
VPS37C-202ENST00000535818 BTG3Q14201 252 aaPredicted RBP24.62■■□□□ 1.53
VPS37C-202ENST00000535818 STK38Q15208 465 aa24.62■■□□□ 1.53
VPS37C-202ENST00000535818 TWF2Q6IBS0 349 aaKnown RBP24.62■■□□□ 1.53
VPS37C-202ENST00000535818 KCNK18Q7Z418 384 aa24.62■■□□□ 1.53
VPS37C-202ENST00000535818 SPRED2Q7Z698 418 aa24.62■■□□□ 1.53
VPS37C-202ENST00000535818 MINDY3Q9H8M7 445 aa24.62■■□□□ 1.53
VPS37C-202ENST00000535818 TMEM161AQ9NX61 479 aa24.62■■□□□ 1.53
VPS37C-202ENST00000535818 POU5F1BQ06416 359 aa24.61■■□□□ 1.53
VPS37C-202ENST00000535818 PKP1Q13835 747 aa24.61■■□□□ 1.53
VPS37C-202ENST00000535818 FOXD4L6Q3SYB3 417 aaPredicted RBP24.61■■□□□ 1.53
VPS37C-202ENST00000535818 TMEM119Q4V9L6 283 aa24.61■■□□□ 1.53
VPS37C-202ENST00000535818 PAN2Q504Q3 1202 aaKnown RBP24.61■■□□□ 1.53
VPS37C-202ENST00000535818 FOXD4L3Q6VB84 417 aaPredicted RBP24.61■■□□□ 1.53
VPS37C-202ENST00000535818 RNF169Q8NCN4 708 aa24.61■■□□□ 1.53
VPS37C-202ENST00000535818 ZNF689Q96CS4 500 aaPredicted RBP24.61■■□□□ 1.53
VPS37C-202ENST00000535818 CSRNP2Q9H175 543 aa24.61■■□□□ 1.53
VPS37C-202ENST00000535818 ELAC1Q9H777 363 aaKnown RBP24.61■■□□□ 1.53
VPS37C-202ENST00000535818 AGPAT5Q9NUQ2 364 aa24.61■■□□□ 1.53
VPS37C-202ENST00000535818 FBXO2Q9UK22 296 aaPredicted RBP24.61■■□□□ 1.53
VPS37C-202ENST00000535818 SRPRBQ9Y5M8 271 aaKnown RBP24.61■■□□□ 1.53
VPS37C-202ENST00000535818 NASPP49321 788 aaPredicted RBP24.6■■□□□ 1.53
VPS37C-202ENST00000535818 ERVK-21P61565 698 aa24.6■■□□□ 1.53
VPS37C-202ENST00000535818 SLC39A14Q15043 492 aa24.6■■□□□ 1.53
VPS37C-202ENST00000535818 PPP2R5AQ15172 486 aa24.6■■□□□ 1.53
VPS37C-202ENST00000535818 IFNLR1Q8IU57 520 aaPredicted RBP24.6■■□□□ 1.53
VPS37C-202ENST00000535818 ZBTB8OSQ8IWT0 167 aa24.6■■□□□ 1.53
VPS37C-202ENST00000535818 CRIPAKQ8N1N5 446 aa24.6■■□□□ 1.53
VPS37C-202ENST00000535818 KIFAP3Q92845 792 aa24.6■■□□□ 1.53
VPS37C-202ENST00000535818 IFT74Q96LB3 600 aa24.6■■□□□ 1.53
VPS37C-202ENST00000535818 RC3H2Q9HBD1 1191 aaKnown RBP24.6■■□□□ 1.53
VPS37C-202ENST00000535818 IGFBP4P22692 258 aa24.59■■□□□ 1.53
VPS37C-202ENST00000535818 TXLNAP40222 546 aa24.59■■□□□ 1.53
VPS37C-202ENST00000535818 FAM189BP81408 668 aa24.59■■□□□ 1.53
VPS37C-202ENST00000535818 NCBP1Q09161 790 aaKnown RBP24.59■■□□□ 1.53
VPS37C-202ENST00000535818 PCBP1Q15365 356 aaKnown RBP eCLIP24.59■■□□□ 1.53
VPS37C-202ENST00000535818 SPECC1Q5M775 1068 aa24.59■■□□□ 1.53
VPS37C-202ENST00000535818 ECHDC2Q86YB7 292 aa24.59■■□□□ 1.53
VPS37C-202ENST00000535818 CMTR2Q8IYT2 770 aaKnown RBP24.59■■□□□ 1.53
VPS37C-202ENST00000535818 SAMD11Q96NU1 681 aa24.59■■□□□ 1.53
VPS37C-202ENST00000535818 C17orf80Q9BSJ5 609 aa24.59■■□□□ 1.53
VPS37C-202ENST00000535818 RUSC1Q9BVN2 902 aa24.59■■□□□ 1.53
VPS37C-202ENST00000535818 NFKBIZQ9BYH8 718 aa24.59■■□□□ 1.53
VPS37C-202ENST00000535818 TFIP11Q9UBB9 837 aaKnown RBP24.59■■□□□ 1.53
VPS37C-202ENST00000535818 DAXXQ9UER7 740 aaPredicted RBP24.59■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms