RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 SH3RF2Q8TEC5 729 aa4.32□□□□□ -1.72
SNHG1-202ENST00000535689 ELF4Q99607 663 aaPredicted RBP4.32□□□□□ -1.72
SNHG1-202ENST00000535689 ZDHHC5Q9C0B5 715 aa4.32□□□□□ -1.72
SNHG1-202ENST00000535689 MCOLN1Q9GZU1 580 aa4.32□□□□□ -1.72
SNHG1-202ENST00000535689 SPTLC3Q9NUV7 552 aa4.32□□□□□ -1.72
SNHG1-202ENST00000535689 MBD1Q9UIS9 605 aaPredicted RBP4.32□□□□□ -1.72
SNHG1-202ENST00000535689 CNOT6Q9ULM6 557 aaKnown RBP4.32□□□□□ -1.72
SNHG1-202ENST00000535689 SIT1Q9Y3P8 196 aa4.32□□□□□ -1.72
SNHG1-202ENST00000535689 RNF114Q9Y508 228 aa4.32□□□□□ -1.72
SNHG1-202ENST00000535689 PMF1-BGLAPU3KQ54 211 aa4.32□□□□□ -1.72
SNHG1-202ENST00000535689 TRPM2O94759 1503 aa4.31□□□□□ -1.72
SNHG1-202ENST00000535689 ATRNO75882 1429 aa4.31□□□□□ -1.72
SNHG1-202ENST00000535689 ERBINQ96RT1 1412 aa4.31□□□□□ -1.72
SNHG1-202ENST00000535689 RIMS2Q9UQ26 1411 aa4.31□□□□□ -1.72
SNHG1-202ENST00000535689 NPHP3Q7Z494 1330 aa4.31□□□□□ -1.72
SNHG1-202ENST00000535689 MYO5BQ9ULV0 1848 aa4.31□□□□□ -1.72
SNHG1-202ENST00000535689 SHTN1A0MZ66 631 aa4.31□□□□□ -1.72
SNHG1-202ENST00000535689 FAM90A27PA6NNH2 459 aa4.31□□□□□ -1.72
SNHG1-202ENST00000535689 GOLGA8AA7E2F4 631 aa4.31□□□□□ -1.72
SNHG1-202ENST00000535689 ZNF839A8K0R7 811 aa4.31□□□□□ -1.72
SNHG1-202ENST00000535689 GOLGA8BA8MQT2 603 aa4.31□□□□□ -1.72
SNHG1-202ENST00000535689 ZNF891A8MT65 544 aaPredicted RBP4.31□□□□□ -1.72
SNHG1-202ENST00000535689 LRG1P02750 347 aa4.31□□□□□ -1.72
SNHG1-202ENST00000535689 MED14OSP0DP75 135 aa4.31□□□□□ -1.72
SNHG1-202ENST00000535689 ECE1P42892 770 aa4.31□□□□□ -1.72
SNHG1-202ENST00000535689 GALK1P51570 392 aa4.31□□□□□ -1.72
SNHG1-202ENST00000535689 SLC5A3P53794 718 aa4.31□□□□□ -1.72
SNHG1-202ENST00000535689 EPHB1P54762 984 aa4.31□□□□□ -1.72
SNHG1-202ENST00000535689 KRT85P78386 507 aa4.31□□□□□ -1.72
SNHG1-202ENST00000535689 SMAD3P84022 425 aaKnown RBP4.31□□□□□ -1.72
SNHG1-202ENST00000535689 ALDH6A1Q02252 535 aaKnown RBP4.31□□□□□ -1.72
SNHG1-202ENST00000535689 SMAD2Q15796 467 aaKnown RBP4.31□□□□□ -1.72
SNHG1-202ENST00000535689 ZNF568Q3ZCX4 644 aa4.31□□□□□ -1.72
SNHG1-202ENST00000535689 BROXQ5VW32 411 aa4.31□□□□□ -1.72
SNHG1-202ENST00000535689 CD276Q5ZPR3 534 aa4.31□□□□□ -1.72
SNHG1-202ENST00000535689 SYDE1Q6ZW31 735 aaPredicted RBP4.31□□□□□ -1.72
SNHG1-202ENST00000535689 DEFB132Q7Z7B7 95 aa4.31□□□□□ -1.72
SNHG1-202ENST00000535689 SMARCC2Q8TAQ2 1214 aa4.31□□□□□ -1.72
SNHG1-202ENST00000535689 LPPQ93052 612 aa4.31□□□□□ -1.72
SNHG1-202ENST00000535689 HIST1H2AHQ96KK5 128 aa4.31□□□□□ -1.72
SNHG1-202ENST00000535689 C16orf92Q96LL3 132 aa4.31□□□□□ -1.72
SNHG1-202ENST00000535689 HIST1H2AJQ99878 128 aa4.31□□□□□ -1.72
SNHG1-202ENST00000535689 CNTD2Q9H8S5 307 aa4.31□□□□□ -1.72
SNHG1-202ENST00000535689 SPON1Q9HCB6 807 aa4.31□□□□□ -1.72
SNHG1-202ENST00000535689 RRP7BPQ9NSQ0 103 aa4.31□□□□□ -1.72
SNHG1-202ENST00000535689 NTMQ9P121 344 aa4.31□□□□□ -1.72
SNHG1-202ENST00000535689 FTSJ1Q9UET6 329 aa4.31□□□□□ -1.72
SNHG1-202ENST00000535689 PCDHA5Q9Y5H7 936 aa4.31□□□□□ -1.72
SNHG1-202ENST00000535689 UNC13BO14795 1591 aa4.31□□□□□ -1.72
SNHG1-202ENST00000535689 BRWD3Q6RI45 1802 aa4.3□□□□□ -1.72
SNHG1-202ENST00000535689 PRAMEF22A3QJZ6 481 aa4.3□□□□□ -1.72
SNHG1-202ENST00000535689 FAM83GA6ND36 823 aa4.3□□□□□ -1.72
SNHG1-202ENST00000535689 DAPK3O43293 454 aa4.3□□□□□ -1.72
SNHG1-202ENST00000535689 RPLP2P05387 115 aaKnown RBP4.3□□□□□ -1.72
SNHG1-202ENST00000535689 SDHBP21912 280 aa4.3□□□□□ -1.72
SNHG1-202ENST00000535689 RAP1GAPP47736 663 aa4.3□□□□□ -1.72
SNHG1-202ENST00000535689 CDR1P51861 262 aa4.3□□□□□ -1.72
SNHG1-202ENST00000535689 PFKPQ01813 784 aa4.3□□□□□ -1.72
SNHG1-202ENST00000535689 ADCY2Q08462 1091 aa4.3□□□□□ -1.72
SNHG1-202ENST00000535689 KIAA2012Q0VF49 1180 aa4.3□□□□□ -1.72
SNHG1-202ENST00000535689 DGKDQ16760 1214 aa4.3□□□□□ -1.72
SNHG1-202ENST00000535689 SYDE2Q5VT97 1194 aa4.3□□□□□ -1.72
SNHG1-202ENST00000535689 PRAMEF18Q5VWM3 479 aa4.3□□□□□ -1.72
SNHG1-202ENST00000535689 PRAMEF9Q5VWM5 478 aa4.3□□□□□ -1.72
SNHG1-202ENST00000535689 SLFN12LQ6IEE8 588 aa4.3□□□□□ -1.72
SNHG1-202ENST00000535689 CNKSR3Q6P9H4 555 aa4.3□□□□□ -1.72
SNHG1-202ENST00000535689 KRTAP19-1Q8IUB9 90 aa4.3□□□□□ -1.72
SNHG1-202ENST00000535689 ASB15Q8WXK1 588 aa4.3□□□□□ -1.72
SNHG1-202ENST00000535689 ERCC4Q92889 916 aaPredicted RBP4.3□□□□□ -1.72
SNHG1-202ENST00000535689 GPATCH3Q96I76 525 aa4.3□□□□□ -1.72
SNHG1-202ENST00000535689 C11orf84Q9BUA3 381 aaPredicted RBP4.3□□□□□ -1.72
SNHG1-202ENST00000535689 L2HGDHQ9H9P8 463 aa4.3□□□□□ -1.72
SNHG1-202ENST00000535689 BARX1Q9HBU1 254 aaPredicted RBP4.3□□□□□ -1.72
SNHG1-202ENST00000535689 RXFP1Q9HBX9 757 aa4.3□□□□□ -1.72
SNHG1-202ENST00000535689 MSL2Q9HCI7 577 aa4.3□□□□□ -1.72
SNHG1-202ENST00000535689 KCMF1Q9P0J7 381 aa4.3□□□□□ -1.72
SNHG1-202ENST00000535689 FBLN5Q9UBX5 448 aa4.3□□□□□ -1.72
SNHG1-202ENST00000535689 MSRAQ9UJ68 235 aa4.3□□□□□ -1.72
SNHG1-202ENST00000535689 ADGRB3O60242 1522 aa4.3□□□□□ -1.72
SNHG1-202ENST00000535689 ASXL1Q8IXJ9 1541 aa4.3□□□□□ -1.72
SNHG1-202ENST00000535689 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.29□□□□□ -1.72
SNHG1-202ENST00000535689 ANKRD30AQ9BXX3 1397 aa4.29□□□□□ -1.72
SNHG1-202ENST00000535689 KIF15Q9NS87 1388 aa4.29□□□□□ -1.72
SNHG1-202ENST00000535689 H0Y858 1186 aa4.29□□□□□ -1.72
SNHG1-202ENST00000535689 KDM1AO60341 852 aa4.29□□□□□ -1.72
SNHG1-202ENST00000535689 H2AFYO75367 372 aaKnown RBP4.29□□□□□ -1.72
SNHG1-202ENST00000535689 SNUPNO95149 360 aaKnown RBP4.29□□□□□ -1.72
SNHG1-202ENST00000535689 TSPAN15O95858 294 aa4.29□□□□□ -1.72
SNHG1-202ENST00000535689 LTFP02788 710 aa4.29□□□□□ -1.72
SNHG1-202ENST00000535689 CT47B1P0C2W7 299 aaPredicted RBP4.29□□□□□ -1.72
SNHG1-202ENST00000535689 C1QTNF8P60827 252 aa4.29□□□□□ -1.72
SNHG1-202ENST00000535689 KLF1Q13351 362 aaPredicted RBP4.29□□□□□ -1.72
SNHG1-202ENST00000535689 SPIDRQ14159 915 aa4.29□□□□□ -1.72
SNHG1-202ENST00000535689 VPS72Q15906 364 aa4.29□□□□□ -1.72
SNHG1-202ENST00000535689 UGT8Q16880 541 aa4.29□□□□□ -1.72
SNHG1-202ENST00000535689 CR1LQ2VPA4 569 aa4.29□□□□□ -1.72
SNHG1-202ENST00000535689 ANO4Q32M45 955 aa4.29□□□□□ -1.72
SNHG1-202ENST00000535689 WDR72Q3MJ13 1102 aa4.29□□□□□ -1.72
SNHG1-202ENST00000535689 KIAA1841Q6NSI8 718 aa4.29□□□□□ -1.72
SNHG1-202ENST00000535689 STRA8Q7Z7C7 330 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms