RNA–Protein interactions for RNA: ENST00000534633.5

USF1-211, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 610 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-211ENST00000534633 TMEM221A6NGB7 291 aa14.11□□□□□ -0.15
USF1-211ENST00000534633 M0R296 226 aa14.11□□□□□ -0.15
USF1-211ENST00000534633 CHMP2AO43633 222 aa14.11□□□□□ -0.15
USF1-211ENST00000534633 PSMD10O75832 226 aa14.11□□□□□ -0.15
USF1-211ENST00000534633 FDPSP14324 419 aaKnown RBP14.11□□□□□ -0.15
USF1-211ENST00000534633 MRE11P49959 708 aa14.11□□□□□ -0.15
USF1-211ENST00000534633 NLRP5P59047 1200 aa14.11□□□□□ -0.15
USF1-211ENST00000534633 TARBP2Q15633 366 aaKnown RBP14.11□□□□□ -0.15
USF1-211ENST00000534633 Q4G0T1 1027 aa14.11□□□□□ -0.15
USF1-211ENST00000534633 CLLU1OSQ5K130 101 aa14.11□□□□□ -0.15
USF1-211ENST00000534633 ANKRD54Q6NXT1 300 aa14.11□□□□□ -0.15
USF1-211ENST00000534633 TRIM22Q8IYM9 498 aa14.11□□□□□ -0.15
USF1-211ENST00000534633 TBCKQ8TEA7 893 aa14.11□□□□□ -0.15
USF1-211ENST00000534633 RPGRIP1Q96KN7 1286 aa14.11□□□□□ -0.15
USF1-211ENST00000534633 AIFM3Q96NN9 605 aa14.11□□□□□ -0.15
USF1-211ENST00000534633 S1PR5Q9H228 398 aa14.11□□□□□ -0.15
USF1-211ENST00000534633 LIMCH1Q9UPQ0 1083 aa14.11□□□□□ -0.15
USF1-211ENST00000534633 MYO10Q9HD67 2058 aa14.11□□□□□ -0.15
USF1-211ENST00000534633 HIDE1A8MVS5 230 aa14.1□□□□□ -0.15
USF1-211ENST00000534633 HOXB8P17481 243 aaPredicted RBP14.1□□□□□ -0.15
USF1-211ENST00000534633 PBX3P40426 434 aa14.1□□□□□ -0.15
USF1-211ENST00000534633 TECP42680 631 aa14.1□□□□□ -0.15
USF1-211ENST00000534633 XKR3Q5GH77 459 aa14.1□□□□□ -0.15
USF1-211ENST00000534633 MIER3Q7Z3K6 550 aa14.1□□□□□ -0.15
USF1-211ENST00000534633 TMC7Q7Z402 723 aa14.1□□□□□ -0.15
USF1-211ENST00000534633 ZNF598Q86UK7 904 aaKnown RBP14.1□□□□□ -0.15
USF1-211ENST00000534633 SLC39A11Q8N1S5 342 aa14.1□□□□□ -0.15
USF1-211ENST00000534633 RNF169Q8NCN4 708 aa14.1□□□□□ -0.15
USF1-211ENST00000534633 NLRP7Q8WX94 980 aa14.1□□□□□ -0.15
USF1-211ENST00000534633 RSPH1Q8WYR4 309 aa14.1□□□□□ -0.15
USF1-211ENST00000534633 PBXIP1Q96AQ6 731 aa14.1□□□□□ -0.15
USF1-211ENST00000534633 ZNF668Q96K58 619 aaPredicted RBP14.1□□□□□ -0.15
USF1-211ENST00000534633 MRPL9Q9BYD2 267 aaKnown RBP14.1□□□□□ -0.15
USF1-211ENST00000534633 NIFKQ9BYG3 293 aaKnown RBP14.1□□□□□ -0.15
USF1-211ENST00000534633 CHST12Q9NRB3 414 aa14.1□□□□□ -0.15
USF1-211ENST00000534633 SEPT9Q9UHD8 586 aaPredicted RBP14.1□□□□□ -0.15
USF1-211ENST00000534633 PCDHA4Q9UN74 947 aa14.1□□□□□ -0.15
USF1-211ENST00000534633 ARID2Q68CP9 1835 aa14.1□□□□□ -0.15
USF1-211ENST00000534633 ZDBF2Q9HCK1 2354 aa14.1□□□□□ -0.15
USF1-211ENST00000534633 CYP3A7-CYP3A51PA0A087WV96 503 aa14.09□□□□□ -0.15
USF1-211ENST00000534633 IGKV6-21A0A0C4DH24 114 aa14.09□□□□□ -0.15
USF1-211ENST00000534633 CPLX1O14810 134 aa14.09□□□□□ -0.15
USF1-211ENST00000534633 FGFR4P22455 802 aa14.09□□□□□ -0.15
USF1-211ENST00000534633 CYP3A7P24462 503 aa14.09□□□□□ -0.15
USF1-211ENST00000534633 DNM2P50570 870 aa14.09□□□□□ -0.15
USF1-211ENST00000534633 SSRP1Q08945 709 aaKnown RBP14.09□□□□□ -0.15
USF1-211ENST00000534633 SIGLEC14Q08ET2 396 aa14.09□□□□□ -0.15
USF1-211ENST00000534633 SMC1AQ14683 1233 aaKnown RBP14.09□□□□□ -0.15
USF1-211ENST00000534633 MTERF2Q49AM1 385 aa14.09□□□□□ -0.15
USF1-211ENST00000534633 LLGL2Q6P1M3 1020 aa14.09□□□□□ -0.15
USF1-211ENST00000534633 SYCE2Q6PIF2 218 aa14.09□□□□□ -0.15
USF1-211ENST00000534633 MOXD1Q6UVY6 613 aa14.09□□□□□ -0.15
USF1-211ENST00000534633 B3GNT9Q6UX72 402 aa14.09□□□□□ -0.15
USF1-211ENST00000534633 SUGP1Q8IWZ8 645 aaKnown RBP14.09□□□□□ -0.15
USF1-211ENST00000534633 FAM177A1Q8N128 213 aaPredicted RBP14.09□□□□□ -0.15
USF1-211ENST00000534633 DAGLBQ8NCG7 672 aa14.09□□□□□ -0.15
USF1-211ENST00000534633 NSUN7Q8NE18 718 aaKnown RBP14.09□□□□□ -0.15
USF1-211ENST00000534633 HELQQ8TDG4 1101 aa14.09□□□□□ -0.15
USF1-211ENST00000534633 CASP10Q92851 521 aa14.09□□□□□ -0.15
USF1-211ENST00000534633 GJA10Q969M2 543 aa14.09□□□□□ -0.15
USF1-211ENST00000534633 CEP89Q96ST8 783 aa14.09□□□□□ -0.15
USF1-211ENST00000534633 PRRX2Q99811 253 aa14.09□□□□□ -0.15
USF1-211ENST00000534633 TRAIPQ9BWF2 469 aa14.09□□□□□ -0.15
USF1-211ENST00000534633 GCOM2Q9BZD3 368 aaPredicted RBP14.09□□□□□ -0.15
USF1-211ENST00000534633 DENND4AQ7Z401 1863 aa14.08□□□□□ -0.16
USF1-211ENST00000534633 CARNS1A5YM72 827 aa14.08□□□□□ -0.16
USF1-211ENST00000534633 JAK2O60674 1132 aa14.08□□□□□ -0.16
USF1-211ENST00000534633 STBD1O95210 358 aa14.08□□□□□ -0.16
USF1-211ENST00000534633 DEXIO95424 95 aa14.08□□□□□ -0.16
USF1-211ENST00000534633 TDP2O95551 362 aa14.08□□□□□ -0.16
USF1-211ENST00000534633 SFPQP23246 707 aaKnown RBP eCLIP14.08□□□□□ -0.16
USF1-211ENST00000534633 ALDH7A1P49419 539 aaKnown RBP14.08□□□□□ -0.16
USF1-211ENST00000534633 DRP2Q13474 957 aa14.08□□□□□ -0.16
USF1-211ENST00000534633 BMS1Q14692 1282 aaKnown RBP14.08□□□□□ -0.16
USF1-211ENST00000534633 PTPN21Q16825 1174 aa14.08□□□□□ -0.16
USF1-211ENST00000534633 TPRNQ4KMQ1 711 aa14.08□□□□□ -0.16
USF1-211ENST00000534633 GALNT17Q6IS24 598 aa14.08□□□□□ -0.16
USF1-211ENST00000534633 ZNF410Q86VK4 478 aa14.08□□□□□ -0.16
USF1-211ENST00000534633 BLIDQ8IZY5 108 aa14.08□□□□□ -0.16
USF1-211ENST00000534633 FBXL6Q8N531 539 aa14.08□□□□□ -0.16
USF1-211ENST00000534633 MRPL43Q8N983 215 aaKnown RBP14.08□□□□□ -0.16
USF1-211ENST00000534633 MBOAT7Q96N66 472 aa14.08□□□□□ -0.16
USF1-211ENST00000534633 INO80BQ9C086 356 aaPredicted RBP14.08□□□□□ -0.16
USF1-211ENST00000534633 GJB4Q9NTQ9 266 aa14.08□□□□□ -0.16
USF1-211ENST00000534633 A0A087WZ62 844 aa14.07□□□□□ -0.16
USF1-211ENST00000534633 C2orf71A6NGG8 1288 aa14.07□□□□□ -0.16
USF1-211ENST00000534633 M0R2N6 131 aa14.07□□□□□ -0.16
USF1-211ENST00000534633 MAFO75444 373 aaPredicted RBP14.07□□□□□ -0.16
USF1-211ENST00000534633 CSDE1O75534 798 aaKnown RBP14.07□□□□□ -0.16
USF1-211ENST00000534633 SKIP12755 728 aa14.07□□□□□ -0.16
USF1-211ENST00000534633 PHKA2P46019 1235 aa14.07□□□□□ -0.16
USF1-211ENST00000534633 BCAR1P56945 870 aa14.07□□□□□ -0.16
USF1-211ENST00000534633 ITIH3Q06033 890 aa14.07□□□□□ -0.16
USF1-211ENST00000534633 NPY5RQ15761 445 aa14.07□□□□□ -0.16
USF1-211ENST00000534633 TWF2Q6IBS0 349 aaKnown RBP14.07□□□□□ -0.16
USF1-211ENST00000534633 CCDC83Q8IWF9 413 aa14.07□□□□□ -0.16
USF1-211ENST00000534633 ETNPPLQ8TBG4 499 aa14.07□□□□□ -0.16
USF1-211ENST00000534633 TMEM169Q96HH4 297 aa14.07□□□□□ -0.16
USF1-211ENST00000534633 ZSCAN31Q96LW9 406 aaPredicted RBP14.07□□□□□ -0.16
USF1-211ENST00000534633 JPH2Q9BR39 696 aaPredicted RBP14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms