RNA–Protein interactions for RNA: ENST00000533738.6

NUCB2-216, Transcript of nucleobindin 2, humanhuman

TSL 1 (best)

Gene NUCB2, Length 534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCB2-216ENST00000533738 FGFR1P11362 822 aa13.26□□□□□ -0.29
NUCB2-216ENST00000533738 ZSCAN20P17040 1043 aaPredicted RBP13.26□□□□□ -0.29
NUCB2-216ENST00000533738 SFPQP23246 707 aaKnown RBP eCLIP13.26□□□□□ -0.29
NUCB2-216ENST00000533738 RILPL1Q5EBL4 403 aa13.26□□□□□ -0.29
NUCB2-216ENST00000533738 FAM102BQ5T8I3 360 aa13.26□□□□□ -0.29
NUCB2-216ENST00000533738 LARP1BQ659C4 914 aaKnown RBP13.26□□□□□ -0.29
NUCB2-216ENST00000533738 FERMT3Q86UX7 667 aa13.26□□□□□ -0.29
NUCB2-216ENST00000533738 ERMNQ8TAM6 284 aa13.26□□□□□ -0.29
NUCB2-216ENST00000533738 TCP11Q8WWU5 503 aa13.26□□□□□ -0.29
NUCB2-216ENST00000533738 CCDC43Q96MW1 224 aaKnown RBP13.26□□□□□ -0.29
NUCB2-216ENST00000533738 ELAC1Q9H777 363 aaKnown RBP13.26□□□□□ -0.29
NUCB2-216ENST00000533738 MINDY3Q9H8M7 445 aa13.26□□□□□ -0.29
NUCB2-216ENST00000533738 ATP6V0A4Q9HBG4 840 aa13.26□□□□□ -0.29
NUCB2-216ENST00000533738 TMEM161AQ9NX61 479 aa13.26□□□□□ -0.29
NUCB2-216ENST00000533738 LMCD1Q9NZU5 365 aa13.26□□□□□ -0.29
NUCB2-216ENST00000533738 MYO9BQ13459 2157 aa13.25□□□□□ -0.29
NUCB2-216ENST00000533738 LAD1O00515 517 aa13.25□□□□□ -0.29
NUCB2-216ENST00000533738 USO1O60763 962 aaKnown RBP13.25□□□□□ -0.29
NUCB2-216ENST00000533738 DGAT1O75907 488 aa13.25□□□□□ -0.29
NUCB2-216ENST00000533738 SRGAP2CP0DJJ0 459 aa13.25□□□□□ -0.29
NUCB2-216ENST00000533738 XRCC6P12956 609 aaKnown RBP eCLIP13.25□□□□□ -0.29
NUCB2-216ENST00000533738 RPA1P27694 616 aa13.25□□□□□ -0.29
NUCB2-216ENST00000533738 BMPR1AP36894 532 aa13.25□□□□□ -0.29
NUCB2-216ENST00000533738 GPM6BQ13491 265 aa13.25□□□□□ -0.29
NUCB2-216ENST00000533738 IL17AQ16552 155 aa13.25□□□□□ -0.29
NUCB2-216ENST00000533738 ECM1Q16610 540 aa13.25□□□□□ -0.29
NUCB2-216ENST00000533738 ECHDC2Q86YB7 292 aa13.25□□□□□ -0.29
NUCB2-216ENST00000533738 IGSF22Q8N9C0 903 aa13.25□□□□□ -0.29
NUCB2-216ENST00000533738 RNF149Q8NC42 400 aa13.25□□□□□ -0.29
NUCB2-216ENST00000533738 ASAP3Q8TDY4 903 aa13.25□□□□□ -0.29
NUCB2-216ENST00000533738 INO80BQ9C086 356 aaPredicted RBP13.25□□□□□ -0.29
NUCB2-216ENST00000533738 RNF19AQ9NV58 838 aa13.25□□□□□ -0.29
NUCB2-216ENST00000533738 LRWD1Q9UFC0 647 aa13.25□□□□□ -0.29
NUCB2-216ENST00000533738 DBR1Q9UK59 544 aaKnown RBP13.25□□□□□ -0.29
NUCB2-216ENST00000533738 PIN4Q9Y237 131 aaKnown RBP13.25□□□□□ -0.29
NUCB2-216ENST00000533738 RWDD3Q9Y3V2 267 aa13.25□□□□□ -0.29
NUCB2-216ENST00000533738 PRRC2BQ5JSZ5 2229 aaKnown RBP13.25□□□□□ -0.29
NUCB2-216ENST00000533738 TBKBP1A7MCY6 615 aa13.24□□□□□ -0.29
NUCB2-216ENST00000533738 PP2D1A8MPX8 630 aa13.24□□□□□ -0.29
NUCB2-216ENST00000533738 ASAP2O43150 1006 aa13.24□□□□□ -0.29
NUCB2-216ENST00000533738 ATF7P17544 494 aaPredicted RBP13.24□□□□□ -0.29
NUCB2-216ENST00000533738 ARL2P36404 184 aa13.24□□□□□ -0.29
NUCB2-216ENST00000533738 CCT6AP40227 531 aaKnown RBP13.24□□□□□ -0.29
NUCB2-216ENST00000533738 PRPHP41219 470 aa13.24□□□□□ -0.29
NUCB2-216ENST00000533738 ATP2C1P98194 919 aaPredicted RBP13.24□□□□□ -0.29
NUCB2-216ENST00000533738 CAPSQ13938 189 aa13.24□□□□□ -0.29
NUCB2-216ENST00000533738 PDIA5Q14554 519 aa13.24□□□□□ -0.29
NUCB2-216ENST00000533738 HAUS3Q68CZ6 603 aa13.24□□□□□ -0.29
NUCB2-216ENST00000533738 CATSPER4Q7RTX7 472 aa13.24□□□□□ -0.29
NUCB2-216ENST00000533738 SRGAP1Q7Z6B7 1085 aa13.24□□□□□ -0.29
NUCB2-216ENST00000533738 ZNF598Q86UK7 904 aaKnown RBP13.24□□□□□ -0.29
NUCB2-216ENST00000533738 MRPL38Q96DV4 380 aaKnown RBP13.24□□□□□ -0.29
NUCB2-216ENST00000533738 NACC1Q96RE7 527 aa13.24□□□□□ -0.29
NUCB2-216ENST00000533738 C11orf84Q9BUA3 381 aaPredicted RBP13.24□□□□□ -0.29
NUCB2-216ENST00000533738 GPRC5CQ9NQ84 441 aa13.24□□□□□ -0.29
NUCB2-216ENST00000533738 CHST12Q9NRB3 414 aa13.24□□□□□ -0.29
NUCB2-216ENST00000533738 THEGQ9P2T0 379 aa13.24□□□□□ -0.29
NUCB2-216ENST00000533738 HCSTQ9UBK5 93 aa13.24□□□□□ -0.29
NUCB2-216ENST00000533738 RALGAPA2Q2PPJ7 1873 aa13.24□□□□□ -0.29
NUCB2-216ENST00000533738 NLRC5Q86WI3 1866 aa13.24□□□□□ -0.29
NUCB2-216ENST00000533738 A0A0U1RQF3 1178 aa13.23□□□□□ -0.29
NUCB2-216ENST00000533738 K7ELQ4 463 aaPredicted RBP13.23□□□□□ -0.29
NUCB2-216ENST00000533738 GRM6O15303 877 aa13.23□□□□□ -0.29
NUCB2-216ENST00000533738 RB1P06400 928 aa13.23□□□□□ -0.29
NUCB2-216ENST00000533738 MUTP22033 750 aa13.23□□□□□ -0.29
NUCB2-216ENST00000533738 GLRA2P23416 452 aa13.23□□□□□ -0.29
NUCB2-216ENST00000533738 PHKA2P46019 1235 aa13.23□□□□□ -0.29
NUCB2-216ENST00000533738 MXD4Q14582 209 aaPredicted RBP13.23□□□□□ -0.29
NUCB2-216ENST00000533738 SKIV2LQ15477 1246 aaKnown RBP13.23□□□□□ -0.29
NUCB2-216ENST00000533738 PTPROQ16827 1216 aa13.23□□□□□ -0.29
NUCB2-216ENST00000533738 CLLU1OSQ5K130 101 aa13.23□□□□□ -0.29
NUCB2-216ENST00000533738 RNF169Q8NCN4 708 aa13.23□□□□□ -0.29
NUCB2-216ENST00000533738 SNX29Q8TEQ0 813 aa13.23□□□□□ -0.29
NUCB2-216ENST00000533738 CASD1Q96PB1 797 aa13.23□□□□□ -0.29
NUCB2-216ENST00000533738 TRAIPQ9BWF2 469 aa13.23□□□□□ -0.29
NUCB2-216ENST00000533738 PLVAPQ9BX97 442 aa13.23□□□□□ -0.29
NUCB2-216ENST00000533738 POLR3FQ9H1D9 316 aaPredicted RBP13.23□□□□□ -0.29
NUCB2-216ENST00000533738 AGPAT5Q9NUQ2 364 aa13.23□□□□□ -0.29
NUCB2-216ENST00000533738 DACT1Q9NYF0 836 aa13.23□□□□□ -0.29
NUCB2-216ENST00000533738 KIAA1671Q9BY89 1806 aa13.23□□□□□ -0.29
NUCB2-216ENST00000533738 VPS37CA5D8V6 355 aaPredicted RBP13.22□□□□□ -0.29
NUCB2-216ENST00000533738 HOXA2O43364 376 aa13.22□□□□□ -0.29
NUCB2-216ENST00000533738 CDC25AP30304 524 aa13.22□□□□□ -0.29
NUCB2-216ENST00000533738 HOXA11P31270 313 aaPredicted RBP13.22□□□□□ -0.29
NUCB2-216ENST00000533738 PTENP60484 403 aa13.22□□□□□ -0.29
NUCB2-216ENST00000533738 TFDP1Q14186 410 aa13.22□□□□□ -0.29
NUCB2-216ENST00000533738 TWF2Q6IBS0 349 aaKnown RBP13.22□□□□□ -0.29
NUCB2-216ENST00000533738 PADI6Q6TGC4 694 aa13.22□□□□□ -0.29
NUCB2-216ENST00000533738 DTHD1Q6ZMT9 781 aa13.22□□□□□ -0.29
NUCB2-216ENST00000533738 MAEAQ7L5Y9 396 aa13.22□□□□□ -0.29
NUCB2-216ENST00000533738 BRAPQ7Z569 592 aa13.22□□□□□ -0.29
NUCB2-216ENST00000533738 INTS4Q96HW7 963 aaKnown RBP13.22□□□□□ -0.29
NUCB2-216ENST00000533738 RAB34Q9BZG1 259 aa13.22□□□□□ -0.29
NUCB2-216ENST00000533738 TMEM117Q9H0C3 514 aa13.22□□□□□ -0.29
NUCB2-216ENST00000533738 ALG13Q9NP73 1137 aaKnown RBP13.22□□□□□ -0.29
NUCB2-216ENST00000533738 DDX19AQ9NUU7 478 aaKnown RBP13.22□□□□□ -0.29
NUCB2-216ENST00000533738 TYW1Q9NV66 732 aaKnown RBP13.22□□□□□ -0.29
NUCB2-216ENST00000533738 KIAA1024Q9UPX6 916 aa13.22□□□□□ -0.29
NUCB2-216ENST00000533738 ARHGEF35A5YM69 484 aa13.21□□□□□ -0.29
NUCB2-216ENST00000533738 TSPAN1O60635 241 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms