RNA–Protein interactions for RNA: ENST00000533089.5

TGFBR3-210, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 6,455 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-210ENST00000533089 PPP1R37O75864 691 aa7.44□□□□□ -1.22
TGFBR3-210ENST00000533089 BAIAP3O94812 1187 aa7.44□□□□□ -1.22
TGFBR3-210ENST00000533089 RFC5P40937 340 aa7.44□□□□□ -1.22
TGFBR3-210ENST00000533089 BTDP43251 543 aa7.44□□□□□ -1.22
TGFBR3-210ENST00000533089 CACNA2D1P54289 1103 aa7.44□□□□□ -1.22
TGFBR3-210ENST00000533089 ARPP19P56211 112 aa7.44□□□□□ -1.22
TGFBR3-210ENST00000533089 FBXW4P57775 412 aa7.44□□□□□ -1.22
TGFBR3-210ENST00000533089 LAMC2Q13753 1193 aa7.44□□□□□ -1.22
TGFBR3-210ENST00000533089 KCTD2Q14681 263 aa7.44□□□□□ -1.22
TGFBR3-210ENST00000533089 C16orf72Q14CZ0 275 aa7.44□□□□□ -1.22
TGFBR3-210ENST00000533089 BTNL9Q6UXG8 535 aa7.44□□□□□ -1.22
TGFBR3-210ENST00000533089 SEC16BQ96JE7 1060 aa7.44□□□□□ -1.22
TGFBR3-210ENST00000533089 CDHR1Q96JP9 859 aa7.44□□□□□ -1.22
TGFBR3-210ENST00000533089 NOL6Q9H6R4 1146 aaKnown RBP7.44□□□□□ -1.22
TGFBR3-210ENST00000533089 AKT3Q9Y243 479 aa7.44□□□□□ -1.22
TGFBR3-210ENST00000533089 C15orf41Q9Y2V0 281 aa7.44□□□□□ -1.22
TGFBR3-210ENST00000533089 MAD1L1Q9Y6D9 718 aa7.44□□□□□ -1.22
TGFBR3-210ENST00000533089 MROH2AA6NES4 1674 aa7.43□□□□□ -1.22
TGFBR3-210ENST00000533089 GOLGA8MH3BSY2 632 aa7.43□□□□□ -1.22
TGFBR3-210ENST00000533089 SGSM2O43147 1006 aa7.43□□□□□ -1.22
TGFBR3-210ENST00000533089 HSPA1AP0DMV8 641 aaKnown RBP7.43□□□□□ -1.22
TGFBR3-210ENST00000533089 HSPA1BP0DMV9 641 aaKnown RBP7.43□□□□□ -1.22
TGFBR3-210ENST00000533089 PPP2R2AP63151 447 aa7.43□□□□□ -1.22
TGFBR3-210ENST00000533089 MTA1Q13330 715 aa7.43□□□□□ -1.22
TGFBR3-210ENST00000533089 KPNB1Q14974 876 aaKnown RBP7.43□□□□□ -1.22
TGFBR3-210ENST00000533089 TJAP1Q5JTD0 557 aa7.43□□□□□ -1.22
TGFBR3-210ENST00000533089 SFMBT2Q5VUG0 894 aa7.43□□□□□ -1.22
TGFBR3-210ENST00000533089 ATL3Q6DD88 541 aa7.43□□□□□ -1.22
TGFBR3-210ENST00000533089 MCF2L2Q86YR7 1114 aa7.43□□□□□ -1.22
TGFBR3-210ENST00000533089 HAUS4Q9H6D7 363 aa7.43□□□□□ -1.22
TGFBR3-210ENST00000533089 FGFR1OP2Q9NVK5 253 aa7.43□□□□□ -1.22
TGFBR3-210ENST00000533089 MAP10Q9P2G4 905 aa7.43□□□□□ -1.22
TGFBR3-210ENST00000533089 NFU1Q9UMS0 254 aa7.43□□□□□ -1.22
TGFBR3-210ENST00000533089 THAP12O43422 761 aa7.43□□□□□ -1.22
TGFBR3-210ENST00000533089 TTC4O95801 387 aa7.43□□□□□ -1.22
TGFBR3-210ENST00000533089 DLATP10515 647 aaKnown RBP7.43□□□□□ -1.22
TGFBR3-210ENST00000533089 SCG2P13521 617 aa7.43□□□□□ -1.22
TGFBR3-210ENST00000533089 NFKBIAP25963 317 aa7.43□□□□□ -1.22
TGFBR3-210ENST00000533089 XDHP47989 1333 aa7.43□□□□□ -1.22
TGFBR3-210ENST00000533089 R3HDM1Q15032 1099 aaKnown RBP7.43□□□□□ -1.22
TGFBR3-210ENST00000533089 LGSNQ5TDP6 509 aa7.43□□□□□ -1.22
TGFBR3-210ENST00000533089 FAM160B1Q5W0V3 765 aa7.43□□□□□ -1.22
TGFBR3-210ENST00000533089 TYW1BQ6NUM6 668 aa7.43□□□□□ -1.22
TGFBR3-210ENST00000533089 LSM14BQ9BX40 385 aaKnown RBP7.43□□□□□ -1.22
TGFBR3-210ENST00000533089 PITPNM3Q9BZ71 974 aa7.43□□□□□ -1.22
TGFBR3-210ENST00000533089 SYBUQ9NX95 663 aa7.43□□□□□ -1.22
TGFBR3-210ENST00000533089 DDX56Q9NY93 547 aaKnown RBP7.43□□□□□ -1.22
TGFBR3-210ENST00000533089 PRAMEF22A3QJZ6 481 aa7.43□□□□□ -1.22
TGFBR3-210ENST00000533089 USP17L12C9JPN9 530 aa7.43□□□□□ -1.22
TGFBR3-210ENST00000533089 USP17L21D6R901 530 aa7.43□□□□□ -1.22
TGFBR3-210ENST00000533089 IGF2BP3O00425 579 aaKnown RBP eCLIP7.43□□□□□ -1.221e-6■■■□□ 18.1
TGFBR3-210ENST00000533089 DNALI1O14645 258 aaPredicted RBP7.43□□□□□ -1.22
TGFBR3-210ENST00000533089 PYGBP11216 843 aa7.43□□□□□ -1.22
TGFBR3-210ENST00000533089 ACADSP16219 412 aa7.43□□□□□ -1.22
TGFBR3-210ENST00000533089 GSTT1P30711 240 aa7.43□□□□□ -1.22
TGFBR3-210ENST00000533089 RPS6KA2Q15349 733 aa7.43□□□□□ -1.22
TGFBR3-210ENST00000533089 PTPROQ16827 1216 aa7.43□□□□□ -1.22
TGFBR3-210ENST00000533089 PROSER3Q2NL68 480 aa7.43□□□□□ -1.22
TGFBR3-210ENST00000533089 EMBQ6PCB8 327 aa7.43□□□□□ -1.22
TGFBR3-210ENST00000533089 FBXO11Q86XK2 927 aa7.43□□□□□ -1.22
TGFBR3-210ENST00000533089 KCNF1Q9H3M0 494 aa7.43□□□□□ -1.22
TGFBR3-210ENST00000533089 IL1RAPL1Q9NZN1 696 aa7.43□□□□□ -1.22
TGFBR3-210ENST00000533089 DAPK2Q9UIK4 370 aa7.43□□□□□ -1.22
TGFBR3-210ENST00000533089 CD163L1Q9NR16 1453 aa7.43□□□□□ -1.22
TGFBR3-210ENST00000533089 COL15A1P39059 1388 aa7.43□□□□□ -1.22
TGFBR3-210ENST00000533089 KDM3AQ9Y4C1 1321 aa7.43□□□□□ -1.22
TGFBR3-210ENST00000533089 XPO1O14980 1071 aaKnown RBP7.43□□□□□ -1.22
TGFBR3-210ENST00000533089 PFKFB2O60825 505 aa7.43□□□□□ -1.22
TGFBR3-210ENST00000533089 MMP10P09238 476 aa7.43□□□□□ -1.22
TGFBR3-210ENST00000533089 SAT1P21673 171 aa7.43□□□□□ -1.22
TGFBR3-210ENST00000533089 VHLP40337 213 aa7.43□□□□□ -1.22
TGFBR3-210ENST00000533089 MDH1P40925 334 aaKnown RBP7.43□□□□□ -1.22
TGFBR3-210ENST00000533089 TECP42680 631 aa7.43□□□□□ -1.22
TGFBR3-210ENST00000533089 BNIP1Q12981 228 aa7.43□□□□□ -1.22
TGFBR3-210ENST00000533089 SKIV2LQ15477 1246 aaKnown RBP7.43□□□□□ -1.22
TGFBR3-210ENST00000533089 TSHZ1Q6ZSZ6 1077 aa7.43□□□□□ -1.22
TGFBR3-210ENST00000533089 NUP58Q9BVL2 599 aa7.43□□□□□ -1.22
TGFBR3-210ENST00000533089 TEKT3Q9BXF9 490 aa7.43□□□□□ -1.22
TGFBR3-210ENST00000533089 SPATA7Q9P0W8 599 aa7.43□□□□□ -1.22
TGFBR3-210ENST00000533089 TLR3O15455 904 aaKnown RBP7.43□□□□□ -1.22
TGFBR3-210ENST00000533089 EEF1GP26641 437 aaKnown RBP7.43□□□□□ -1.22
TGFBR3-210ENST00000533089 STX1BP61266 288 aa7.43□□□□□ -1.22
TGFBR3-210ENST00000533089 MAGOHP61326 146 aaKnown RBP7.43□□□□□ -1.22
TGFBR3-210ENST00000533089 PEX26Q7Z412 305 aa7.43□□□□□ -1.22
TGFBR3-210ENST00000533089 KRT73Q86Y46 540 aa7.43□□□□□ -1.22
TGFBR3-210ENST00000533089 RETREG2Q8NC44 543 aa7.43□□□□□ -1.22
TGFBR3-210ENST00000533089 U2AF1L4Q8WU68 220 aaKnown RBP7.43□□□□□ -1.22
TGFBR3-210ENST00000533089 SDR42E1Q8WUS8 393 aa7.43□□□□□ -1.22
TGFBR3-210ENST00000533089 RIN2Q8WYP3 895 aaPredicted RBP7.43□□□□□ -1.22
TGFBR3-210ENST00000533089 MAGOHBQ96A72 148 aaKnown RBP7.43□□□□□ -1.22
TGFBR3-210ENST00000533089 VMP1Q96GC9 406 aa7.43□□□□□ -1.22
TGFBR3-210ENST00000533089 NT5C3AQ9H0P0 336 aa7.43□□□□□ -1.22
TGFBR3-210ENST00000533089 SYNDIG1Q9H7V2 258 aa7.43□□□□□ -1.22
TGFBR3-210ENST00000533089 TRPC7Q9HCX4 862 aa7.43□□□□□ -1.22
TGFBR3-210ENST00000533089 NLRC4Q9NPP4 1024 aa7.43□□□□□ -1.22
TGFBR3-210ENST00000533089 ATP8A2Q9NTI2 1148 aa7.43□□□□□ -1.22
TGFBR3-210ENST00000533089 ATAD3AQ9NVI7 634 aa7.43□□□□□ -1.22
TGFBR3-210ENST00000533089 DNAJC17Q9NVM6 304 aaKnown RBP7.43□□□□□ -1.22
TGFBR3-210ENST00000533089 HESX1Q9UBX0 185 aa7.43□□□□□ -1.22
TGFBR3-210ENST00000533089 ASNA1O43681 348 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 108.7 ms