RNA–Protein interactions for RNA: ENST00000532793.1

PPFIA1-223, Transcript of PTPRF interacting protein alpha 1, human

TSL 3

Gene PPFIA1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPFIA1-223	ENST00000532793	FGF18	O76093	207 aa		10.85	□□□□□ -0.67
PPFIA1-223	ENST00000532793	DEXI	O95424	95 aa		10.85	□□□□□ -0.67
PPFIA1-223	ENST00000532793	ATP4A	P20648	1035 aa		10.85	□□□□□ -0.67
PPFIA1-223	ENST00000532793	EIF4B	P23588	611 aa	Known RBP	10.85	□□□□□ -0.67
PPFIA1-223	ENST00000532793	PDIA3	P30101	505 aa	Known RBP	10.85	□□□□□ -0.67
PPFIA1-223	ENST00000532793	IRS1	P35568	1242 aa		10.85	□□□□□ -0.67
PPFIA1-223	ENST00000532793	PPM1A	P35813	382 aa		10.85	□□□□□ -0.67
PPFIA1-223	ENST00000532793	DNM2	P50570	870 aa		10.85	□□□□□ -0.67
PPFIA1-223	ENST00000532793	PRKCE	Q02156	737 aa		10.85	□□□□□ -0.67
PPFIA1-223	ENST00000532793	KRT17	Q04695	432 aa		10.85	□□□□□ -0.67
PPFIA1-223	ENST00000532793	DLX2	Q07687	328 aa	Predicted RBP	10.85	□□□□□ -0.67
PPFIA1-223	ENST00000532793	FAM102B	Q5T8I3	360 aa		10.85	□□□□□ -0.67
PPFIA1-223	ENST00000532793	RUFY3	Q7L099	469 aa		10.85	□□□□□ -0.67
PPFIA1-223	ENST00000532793	ADGRD2	Q7Z7M1	963 aa		10.85	□□□□□ -0.67
PPFIA1-223	ENST00000532793	CRIPAK	Q8N1N5	446 aa		10.85	□□□□□ -0.67
PPFIA1-223	ENST00000532793	LRRC43	Q8N309	656 aa		10.85	□□□□□ -0.67
PPFIA1-223	ENST00000532793	LRRC71	Q8N4P6	559 aa		10.85	□□□□□ -0.67
PPFIA1-223	ENST00000532793	COLGALT1	Q8NBJ5	622 aa		10.85	□□□□□ -0.67
PPFIA1-223	ENST00000532793	RNF169	Q8NCN4	708 aa		10.85	□□□□□ -0.67
PPFIA1-223	ENST00000532793	TBCK	Q8TEA7	893 aa		10.85	□□□□□ -0.67
PPFIA1-223	ENST00000532793	CDCA3	Q99618	268 aa	Predicted RBP	10.85	□□□□□ -0.67
PPFIA1-223	ENST00000532793	KRTAP4-6	Q9BYQ5	205 aa		10.85	□□□□□ -0.67
PPFIA1-223	ENST00000532793	AGXT2	Q9BYV1	514 aa		10.85	□□□□□ -0.67
PPFIA1-223	ENST00000532793	TMEM117	Q9H0C3	514 aa		10.85	□□□□□ -0.67
PPFIA1-223	ENST00000532793	C11orf16	Q9NQ32	467 aa		10.85	□□□□□ -0.67
PPFIA1-223	ENST00000532793	ENTPD7	Q9NQZ7	604 aa		10.85	□□□□□ -0.67
PPFIA1-223	ENST00000532793	TYW1	Q9NV66	732 aa	Known RBP	10.85	□□□□□ -0.67
PPFIA1-223	ENST00000532793	DACT1	Q9NYF0	836 aa		10.85	□□□□□ -0.67
PPFIA1-223	ENST00000532793	KIAA1468	Q9P260	1216 aa		10.85	□□□□□ -0.67
PPFIA1-223	ENST00000532793	SEPT9	Q9UHD8	586 aa	Predicted RBP	10.85	□□□□□ -0.67
PPFIA1-223	ENST00000532793	PCDHA4	Q9UN74	947 aa		10.85	□□□□□ -0.67
PPFIA1-223	ENST00000532793	TRANK1	O15050	2925 aa		10.85	□□□□□ -0.67
PPFIA1-223	ENST00000532793	MSH4	O15457	936 aa		10.84	□□□□□ -0.67
PPFIA1-223	ENST00000532793	EPB41L2	O43491	1005 aa	Known RBP	10.84	□□□□□ -0.67
PPFIA1-223	ENST00000532793	GPR32	O75388	356 aa		10.84	□□□□□ -0.67
PPFIA1-223	ENST00000532793	CDKL5	O76039	1030 aa		10.84	□□□□□ -0.67
PPFIA1-223	ENST00000532793	FGFR1	P11362	822 aa		10.84	□□□□□ -0.67
PPFIA1-223	ENST00000532793	XBP1	P17861	261 aa		10.84	□□□□□ -0.67
PPFIA1-223	ENST00000532793	DNAJB1	P25685	340 aa		10.84	□□□□□ -0.67
PPFIA1-223	ENST00000532793	CA8	P35219	290 aa		10.84	□□□□□ -0.67
PPFIA1-223	ENST00000532793	CDC42EP1	Q00587	391 aa		10.84	□□□□□ -0.67
PPFIA1-223	ENST00000532793	COASY	Q13057	564 aa		10.84	□□□□□ -0.67
PPFIA1-223	ENST00000532793	CAMK1	Q14012	370 aa		10.84	□□□□□ -0.67
PPFIA1-223	ENST00000532793	GALNT17	Q6IS24	598 aa		10.84	□□□□□ -0.67
PPFIA1-223	ENST00000532793	BLID	Q8IZY5	108 aa		10.84	□□□□□ -0.67
PPFIA1-223	ENST00000532793	TMEM87A	Q8NBN3	555 aa		10.84	□□□□□ -0.67
PPFIA1-223	ENST00000532793	RDM1	Q8NG50	284 aa		10.84	□□□□□ -0.67
PPFIA1-223	ENST00000532793	ZNF558	Q96NG5	402 aa		10.84	□□□□□ -0.67
PPFIA1-223	ENST00000532793	MRPL9	Q9BYD2	267 aa	Known RBP	10.84	□□□□□ -0.67
PPFIA1-223	ENST00000532793	GCOM2	Q9BZD3	368 aa	Predicted RBP	10.84	□□□□□ -0.67
PPFIA1-223	ENST00000532793	INO80B	Q9C086	356 aa	Predicted RBP	10.84	□□□□□ -0.67
PPFIA1-223	ENST00000532793	NCOA5	Q9HCD5	579 aa	Known RBP	10.84	□□□□□ -0.67
PPFIA1-223	ENST00000532793	BARX2	Q9UMQ3	279 aa	Predicted RBP	10.84	□□□□□ -0.67
PPFIA1-223	ENST00000532793	CCDC194	A0A1B0GVG4	234 aa		10.83	□□□□□ -0.68
PPFIA1-223	ENST00000532793	MARCH6	O60337	910 aa		10.83	□□□□□ -0.68
PPFIA1-223	ENST00000532793	DKC1	O60832	514 aa	Known RBP eCLIP	10.83	□□□□□ -0.68
PPFIA1-223	ENST00000532793	SFPQ	P23246	707 aa	Known RBP eCLIP	10.83	□□□□□ -0.68
PPFIA1-223	ENST00000532793	STK3	Q13188	491 aa		10.83	□□□□□ -0.68
PPFIA1-223	ENST00000532793	NONO	Q15233	471 aa	Known RBP eCLIP	10.83	□□□□□ -0.68
PPFIA1-223	ENST00000532793	NTRK3	Q16288	839 aa		10.83	□□□□□ -0.68
PPFIA1-223	ENST00000532793	MTERF2	Q49AM1	385 aa		10.83	□□□□□ -0.68
PPFIA1-223	ENST00000532793	PLPP4	Q5VZY2	271 aa		10.83	□□□□□ -0.68
PPFIA1-223	ENST00000532793	FAM177A1	Q8N128	213 aa	Predicted RBP	10.83	□□□□□ -0.68
PPFIA1-223	ENST00000532793	SMRP1	Q8NCR6	262 aa		10.83	□□□□□ -0.68
PPFIA1-223	ENST00000532793	MRPS27	Q92552	414 aa	Known RBP	10.83	□□□□□ -0.68
PPFIA1-223	ENST00000532793	SLC5A5	Q92911	643 aa		10.83	□□□□□ -0.68
PPFIA1-223	ENST00000532793	LENG9	Q96B70	501 aa		10.83	□□□□□ -0.68
PPFIA1-223	ENST00000532793	TCF25	Q9BQ70	676 aa		10.83	□□□□□ -0.68
PPFIA1-223	ENST00000532793	JPH2	Q9BR39	696 aa	Predicted RBP	10.83	□□□□□ -0.68
PPFIA1-223	ENST00000532793	SLK	Q9H2G2	1235 aa	Predicted RBP	10.83	□□□□□ -0.68
PPFIA1-223	ENST00000532793	UNC45A	Q9H3U1	944 aa		10.83	□□□□□ -0.68
PPFIA1-223	ENST00000532793	MUTYH	Q9UIF7	546 aa		10.83	□□□□□ -0.68
PPFIA1-223	ENST00000532793	TSR3	Q9UJK0	312 aa	Known RBP	10.83	□□□□□ -0.68
PPFIA1-223	ENST00000532793	LZTS1	Q9Y250	596 aa		10.83	□□□□□ -0.68
PPFIA1-223	ENST00000532793	CARNS1	A5YM72	827 aa		10.82	□□□□□ -0.68
PPFIA1-223	ENST00000532793	PER2	O15055	1255 aa		10.82	□□□□□ -0.68
PPFIA1-223	ENST00000532793	ADAMTS3	O15072	1205 aa		10.82	□□□□□ -0.68
PPFIA1-223	ENST00000532793	EYA4	O95677	639 aa		10.82	□□□□□ -0.68
PPFIA1-223	ENST00000532793	EOMES	O95936	686 aa		10.82	□□□□□ -0.68
PPFIA1-223	ENST00000532793	NEFL	P07196	543 aa		10.82	□□□□□ -0.68
PPFIA1-223	ENST00000532793	SKI	P12755	728 aa		10.82	□□□□□ -0.68
PPFIA1-223	ENST00000532793	DARS	P14868	501 aa	Known RBP	10.82	□□□□□ -0.68
PPFIA1-223	ENST00000532793	GPC3	P51654	580 aa		10.82	□□□□□ -0.68
PPFIA1-223	ENST00000532793	EVC	P57679	992 aa		10.82	□□□□□ -0.68
PPFIA1-223	ENST00000532793	FAM189B	P81408	668 aa		10.82	□□□□□ -0.68
PPFIA1-223	ENST00000532793	PLCB3	Q01970	1234 aa		10.82	□□□□□ -0.68
PPFIA1-223	ENST00000532793		Q4G0T1	1027 aa		10.82	□□□□□ -0.68
PPFIA1-223	ENST00000532793	XKR3	Q5GH77	459 aa		10.82	□□□□□ -0.68
PPFIA1-223	ENST00000532793	KCNT2	Q6UVM3	1135 aa		10.82	□□□□□ -0.68
PPFIA1-223	ENST00000532793	KRT25	Q7Z3Z0	450 aa		10.82	□□□□□ -0.68
PPFIA1-223	ENST00000532793	TMC7	Q7Z402	723 aa		10.82	□□□□□ -0.68
PPFIA1-223	ENST00000532793	ECHDC2	Q86YB7	292 aa		10.82	□□□□□ -0.68
PPFIA1-223	ENST00000532793	RNF135	Q8IUD6	432 aa		10.82	□□□□□ -0.68
PPFIA1-223	ENST00000532793	ZNF274	Q96GC6	653 aa	Predicted RBP	10.82	□□□□□ -0.68
PPFIA1-223	ENST00000532793	ZNF668	Q96K58	619 aa	Predicted RBP	10.82	□□□□□ -0.68
PPFIA1-223	ENST00000532793	MSLNL	Q96KJ4	702 aa		10.82	□□□□□ -0.68
PPFIA1-223	ENST00000532793	MFSD14A	Q96MC6	490 aa		10.82	□□□□□ -0.68
PPFIA1-223	ENST00000532793	NGRN	Q9NPE2	291 aa	Known RBP	10.82	□□□□□ -0.68
PPFIA1-223	ENST00000532793	CLEC1B	Q9P126	229 aa		10.82	□□□□□ -0.68
PPFIA1-223	ENST00000532793	DDX25	Q9UHL0	483 aa	Known RBP	10.82	□□□□□ -0.68

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