RNA–Protein interactions for RNA: ENST00000532649.5

CTNND1-232, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,026 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-232ENST00000532649 EIF3CLB5ME19 914 aaKnown RBP9.36□□□□□ -0.91
CTNND1-232ENST00000532649 ATF2P15336 505 aa9.36□□□□□ -0.91
CTNND1-232ENST00000532649 RASA1P20936 1047 aa9.36□□□□□ -0.91
CTNND1-232ENST00000532649 ARHGAP25P42331 645 aa9.36□□□□□ -0.91
CTNND1-232ENST00000532649 KRT71Q3SY84 523 aa9.36□□□□□ -0.91
CTNND1-232ENST00000532649 PPP1R2P3Q6NXS1 205 aa9.36□□□□□ -0.91
CTNND1-232ENST00000532649 CCDC138Q96M89 665 aa9.36□□□□□ -0.91
CTNND1-232ENST00000532649 PARK7Q99497 189 aaKnown RBP9.36□□□□□ -0.91
CTNND1-232ENST00000532649 EIF3CQ99613 913 aaKnown RBP9.36□□□□□ -0.91
CTNND1-232ENST00000532649 DRC3Q9H069 523 aa9.36□□□□□ -0.91
CTNND1-232ENST00000532649 VCPKMTQ9H867 229 aa9.36□□□□□ -0.91
CTNND1-232ENST00000532649 GPBP1L1Q9HC44 474 aaPredicted RBP9.36□□□□□ -0.91
CTNND1-232ENST00000532649 ZNF212Q9UDV6 495 aa9.36□□□□□ -0.91
CTNND1-232ENST00000532649 PHLPP2Q6ZVD8 1323 aa9.36□□□□□ -0.91
CTNND1-232ENST00000532649 EXOSC10Q01780 885 aaKnown RBP9.36□□□□□ -0.91
CTNND1-232ENST00000532649 FAM213AQ9BRX8 229 aa9.36□□□□□ -0.91
CTNND1-232ENST00000532649 MRPL47Q9HD33 250 aaKnown RBP9.36□□□□□ -0.91
CTNND1-232ENST00000532649 POLLQ9UGP5 575 aa9.36□□□□□ -0.91
CTNND1-232ENST00000532649 RGS16O15492 202 aaPredicted RBP9.36□□□□□ -0.91
CTNND1-232ENST00000532649 NR3C1P04150 777 aa9.36□□□□□ -0.91
CTNND1-232ENST00000532649 ETF1P62495 437 aaKnown RBP9.36□□□□□ -0.91
CTNND1-232ENST00000532649 BAATQ14032 418 aaPredicted RBP9.36□□□□□ -0.91
CTNND1-232ENST00000532649 CEP55Q53EZ4 464 aa9.36□□□□□ -0.91
CTNND1-232ENST00000532649 XXYLT1Q8NBI6 393 aa9.36□□□□□ -0.91
CTNND1-232ENST00000532649 OR6J1Q8NGC5 347 aa9.36□□□□□ -0.91
CTNND1-232ENST00000532649 ALDH8A1Q9H2A2 487 aaPredicted RBP9.36□□□□□ -0.91
CTNND1-232ENST00000532649 THEGQ9P2T0 379 aa9.36□□□□□ -0.91
CTNND1-232ENST00000532649 EPS15L1Q9UBC2 864 aa9.36□□□□□ -0.91
CTNND1-232ENST00000532649 FAF1Q9UNN5 650 aaPredicted RBP9.36□□□□□ -0.91
CTNND1-232ENST00000532649 TRIM49BA6NDI0 452 aa9.36□□□□□ -0.91
CTNND1-232ENST00000532649 TTI1O43156 1089 aa9.36□□□□□ -0.91
CTNND1-232ENST00000532649 CELF2O95319 508 aaKnown RBP9.36□□□□□ -0.91
CTNND1-232ENST00000532649 RAP1GDS1P52306 607 aa9.36□□□□□ -0.91
CTNND1-232ENST00000532649 HUNKP57058 714 aa9.36□□□□□ -0.91
CTNND1-232ENST00000532649 KRT31Q15323 416 aa9.36□□□□□ -0.91
CTNND1-232ENST00000532649 LCA5Q86VQ0 697 aa9.36□□□□□ -0.91
CTNND1-232ENST00000532649 BBOF1Q8ND07 529 aa9.36□□□□□ -0.91
CTNND1-232ENST00000532649 C2orf40Q9H1Z8 148 aa9.36□□□□□ -0.91
CTNND1-232ENST00000532649 JPH1Q9HDC5 661 aaPredicted RBP9.36□□□□□ -0.91
CTNND1-232ENST00000532649 PTPN22Q9Y2R2 807 aa9.36□□□□□ -0.91
CTNND1-232ENST00000532649 PCDHA10Q9Y5I2 948 aa9.36□□□□□ -0.91
CTNND1-232ENST00000532649 GPR75-ASB3A0A0A6YYF3 556 aa9.36□□□□□ -0.91
CTNND1-232ENST00000532649 KIF28PB7ZC32 967 aa9.36□□□□□ -0.91
CTNND1-232ENST00000532649 ZBED6P86452 979 aa9.36□□□□□ -0.91
CTNND1-232ENST00000532649 RNF139Q8WU17 664 aa9.36□□□□□ -0.91
CTNND1-232ENST00000532649 KCNH4Q9UQ05 1017 aa9.36□□□□□ -0.91
CTNND1-232ENST00000532649 SGK1O00141 431 aa9.35□□□□□ -0.91
CTNND1-232ENST00000532649 ENC1O14682 589 aa9.35□□□□□ -0.91
CTNND1-232ENST00000532649 SART1O43290 800 aaKnown RBP9.35□□□□□ -0.91
CTNND1-232ENST00000532649 SERPING1P05155 500 aa9.35□□□□□ -0.91
CTNND1-232ENST00000532649 EIF4A3P38919 411 aaKnown RBP9.35□□□□□ -0.91
CTNND1-232ENST00000532649 ZNF394Q53GI3 561 aa9.35□□□□□ -0.91
CTNND1-232ENST00000532649 CYFIP1Q7L576 1253 aa9.35□□□□□ -0.91
CTNND1-232ENST00000532649 IGDCC4Q8TDY8 1250 aa9.35□□□□□ -0.91
CTNND1-232ENST00000532649 TEKT4Q8WW24 435 aa9.35□□□□□ -0.91
CTNND1-232ENST00000532649 TTC25Q96NG3 672 aa9.35□□□□□ -0.91
CTNND1-232ENST00000532649 GOLPH3LQ9H4A5 285 aa9.35□□□□□ -0.91
CTNND1-232ENST00000532649 KIAA1586Q9HCI6 787 aa9.35□□□□□ -0.91
CTNND1-232ENST00000532649 KLHL14Q9P2G3 628 aa9.35□□□□□ -0.91
CTNND1-232ENST00000532649 PRR12Q9ULL5 1215 aa9.35□□□□□ -0.91
CTNND1-232ENST00000532649 KRT1P04264 644 aa9.35□□□□□ -0.91
CTNND1-232ENST00000532649 CTNNA1P35221 906 aaKnown RBP9.35□□□□□ -0.91
CTNND1-232ENST00000532649 ARL4AP40617 200 aa9.35□□□□□ -0.91
CTNND1-232ENST00000532649 MAP3K7CLP57077 242 aa9.35□□□□□ -0.91
CTNND1-232ENST00000532649 ZBTB41Q5SVQ8 909 aa9.35□□□□□ -0.91
CTNND1-232ENST00000532649 KCNV1Q6PIU1 500 aa9.35□□□□□ -0.91
CTNND1-232ENST00000532649 ANGPTL8Q6UXH0 198 aa9.35□□□□□ -0.91
CTNND1-232ENST00000532649 CCNYQ8ND76 341 aa9.35□□□□□ -0.91
CTNND1-232ENST00000532649 CCL15-CCL14A0A0B4J2E2 113 aa9.35□□□□□ -0.91
CTNND1-232ENST00000532649 CCL15Q16663 113 aa9.35□□□□□ -0.91
CTNND1-232ENST00000532649 SLC35F6Q8N357 371 aa9.35□□□□□ -0.91
CTNND1-232ENST00000532649 MB21D1Q8N884 522 aa9.35□□□□□ -0.91
CTNND1-232ENST00000532649 CABS1Q96KC9 395 aa9.35□□□□□ -0.91
CTNND1-232ENST00000532649 TRAIPQ9BWF2 469 aa9.35□□□□□ -0.91
CTNND1-232ENST00000532649 NHEJ1Q9H9Q4 299 aaPredicted RBP9.35□□□□□ -0.91
CTNND1-232ENST00000532649 ZFYVE28Q9HCC9 887 aa9.35□□□□□ -0.91
CTNND1-232ENST00000532649 PVALEFA0A1B0GWK0 134 aa9.35□□□□□ -0.91
CTNND1-232ENST00000532649 ZBBXA8MT70 800 aa9.35□□□□□ -0.91
CTNND1-232ENST00000532649 GPC3P51654 580 aa9.35□□□□□ -0.91
CTNND1-232ENST00000532649 BLVRAP53004 296 aa9.35□□□□□ -0.91
CTNND1-232ENST00000532649 BRD3Q15059 726 aa9.35□□□□□ -0.91
CTNND1-232ENST00000532649 SRRM1Q8IYB3 904 aaKnown RBP9.35□□□□□ -0.91
CTNND1-232ENST00000532649 TSC1Q92574 1164 aa9.35□□□□□ -0.91
CTNND1-232ENST00000532649 GCOM2Q9BZD3 368 aaPredicted RBP9.35□□□□□ -0.91
CTNND1-232ENST00000532649 SLITRK6Q9H5Y7 841 aa9.35□□□□□ -0.91
CTNND1-232ENST00000532649 HACD3Q9P035 362 aa9.35□□□□□ -0.91
CTNND1-232ENST00000532649 PASKQ96RG2 1323 aa9.35□□□□□ -0.91
CTNND1-232ENST00000532649 DEPDC5O75140 1603 aa9.35□□□□□ -0.91
CTNND1-232ENST00000532649 COL5A2P05997 1499 aaPredicted RBP9.35□□□□□ -0.91
CTNND1-232ENST00000532649 HMGB3O15347 200 aaKnown RBP9.35□□□□□ -0.91
CTNND1-232ENST00000532649 PDHBP11177 359 aa9.35□□□□□ -0.91
CTNND1-232ENST00000532649 ATP1A3P13637 1013 aa9.35□□□□□ -0.91
CTNND1-232ENST00000532649 GCLMP48507 274 aa9.35□□□□□ -0.91
CTNND1-232ENST00000532649 DYNLT1P63172 113 aa9.35□□□□□ -0.91
CTNND1-232ENST00000532649 LLGL1Q15334 1064 aa9.35□□□□□ -0.91
CTNND1-232ENST00000532649 ZNF699Q32M78 642 aa9.35□□□□□ -0.91
CTNND1-232ENST00000532649 THEM5Q8N1Q8 247 aa9.35□□□□□ -0.91
CTNND1-232ENST00000532649 SNX19Q92543 992 aa9.35□□□□□ -0.91
CTNND1-232ENST00000532649 PPP1R13BQ96KQ4 1090 aa9.35□□□□□ -0.91
CTNND1-232ENST00000532649 SPTLC3Q9NUV7 552 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms