RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 COL4A3BPQ9Y5P4 624 aa19.24■□□□□ 0.67
PHRF1-204ENST00000532550 TCF20Q9UGU0 1960 aaKnown RBP19.24■□□□□ 0.67
PHRF1-204ENST00000532550 NCOR1O75376 2440 aa19.23■□□□□ 0.67
PHRF1-204ENST00000532550 FNDC1Q4ZHG4 1894 aaPredicted RBP19.23■□□□□ 0.67
PHRF1-204ENST00000532550 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.23■□□□□ 0.67
PHRF1-204ENST00000532550 A0A0U1RQF3 1178 aa19.23■□□□□ 0.67
PHRF1-204ENST00000532550 LYPLA2O95372 231 aa19.23■□□□□ 0.67
PHRF1-204ENST00000532550 EOMESO95936 686 aa19.23■□□□□ 0.67
PHRF1-204ENST00000532550 SRGAP2CP0DJJ0 459 aa19.23■□□□□ 0.67
PHRF1-204ENST00000532550 FGFR1P11362 822 aa19.23■□□□□ 0.67
PHRF1-204ENST00000532550 BMP1P13497 986 aa19.23■□□□□ 0.67
PHRF1-204ENST00000532550 KCNQ1P51787 676 aa19.23■□□□□ 0.67
PHRF1-204ENST00000532550 CATSPER4Q7RTX7 472 aa19.23■□□□□ 0.67
PHRF1-204ENST00000532550 ECHDC2Q86YB7 292 aa19.23■□□□□ 0.67
PHRF1-204ENST00000532550 ABI1Q8IZP0 508 aa19.23■□□□□ 0.67
PHRF1-204ENST00000532550 KLHL23Q8NBE8 558 aa19.23■□□□□ 0.67
PHRF1-204ENST00000532550 RNF169Q8NCN4 708 aa19.23■□□□□ 0.67
PHRF1-204ENST00000532550 ADAMTS19Q8TE59 1207 aa19.23■□□□□ 0.67
PHRF1-204ENST00000532550 BMP2KQ9NSY1 1161 aaPredicted RBP19.23■□□□□ 0.67
PHRF1-204ENST00000532550 ANKEF1Q9NU02 776 aa19.23■□□□□ 0.67
PHRF1-204ENST00000532550 TYW1Q9NV66 732 aaKnown RBP19.23■□□□□ 0.67
PHRF1-204ENST00000532550 XRCC6P12956 609 aaKnown RBP eCLIP19.22■□□□□ 0.67
PHRF1-204ENST00000532550 TECP42680 631 aa19.22■□□□□ 0.67
PHRF1-204ENST00000532550 TRAPPC10P48553 1259 aa19.22■□□□□ 0.67
PHRF1-204ENST00000532550 MCM2P49736 904 aa19.22■□□□□ 0.67
PHRF1-204ENST00000532550 LAMTOR4Q0VGL1 99 aa19.22■□□□□ 0.67
PHRF1-204ENST00000532550 EMC2Q15006 297 aa19.22■□□□□ 0.67
PHRF1-204ENST00000532550 TCEAL5Q5H9L2 206 aa19.22■□□□□ 0.67
PHRF1-204ENST00000532550 TTC38Q5R3I4 469 aa19.22■□□□□ 0.67
PHRF1-204ENST00000532550 TMX3Q96JJ7 454 aa19.22■□□□□ 0.67
PHRF1-204ENST00000532550 MTRQ99707 1265 aa19.22■□□□□ 0.67
PHRF1-204ENST00000532550 TMEM117Q9H0C3 514 aa19.22■□□□□ 0.67
PHRF1-204ENST00000532550 UBE2ZQ9H832 354 aaPredicted RBP19.22■□□□□ 0.67
PHRF1-204ENST00000532550 POTEMA6NI47 508 aa19.21■□□□□ 0.67
PHRF1-204ENST00000532550 NCK2O43639 380 aa19.21■□□□□ 0.67
PHRF1-204ENST00000532550 ITGB1P05556 798 aa19.21■□□□□ 0.67
PHRF1-204ENST00000532550 OR52Z1P0C646 297 aa19.21■□□□□ 0.67
PHRF1-204ENST00000532550 TWF2Q6IBS0 349 aaKnown RBP19.21■□□□□ 0.67
PHRF1-204ENST00000532550 SRGAP1Q7Z6B7 1085 aa19.21■□□□□ 0.67
PHRF1-204ENST00000532550 FERMT3Q86UX7 667 aa19.21■□□□□ 0.67
PHRF1-204ENST00000532550 ERMNQ8TAM6 284 aa19.21■□□□□ 0.67
PHRF1-204ENST00000532550 SPPL3Q8TCT6 385 aa19.21■□□□□ 0.67
PHRF1-204ENST00000532550 UHRF1Q96T88 793 aaPredicted RBP19.21■□□□□ 0.67
PHRF1-204ENST00000532550 IFT122Q9HBG6 1241 aa19.21■□□□□ 0.67
PHRF1-204ENST00000532550 PIN4Q9Y237 131 aaKnown RBP19.21■□□□□ 0.67
PHRF1-204ENST00000532550 XIRP2A4UGR9 3374 aa19.2■□□□□ 0.66
PHRF1-204ENST00000532550 DGAT1O75907 488 aa19.2■□□□□ 0.66
PHRF1-204ENST00000532550 SKIP12755 728 aa19.2■□□□□ 0.66
PHRF1-204ENST00000532550 U2AF2P26368 475 aaKnown RBP eCLIP19.2■□□□□ 0.66
PHRF1-204ENST00000532550 MXD4Q14582 209 aaPredicted RBP19.2■□□□□ 0.66
PHRF1-204ENST00000532550 EP400NLQ6ZTU2 488 aa19.2■□□□□ 0.66
PHRF1-204ENST00000532550 PIGOQ8TEQ8 1089 aa19.2■□□□□ 0.66
PHRF1-204ENST00000532550 TBC1D32Q96NH3 1257 aa19.2■□□□□ 0.66
PHRF1-204ENST00000532550 CASD1Q96PB1 797 aa19.2■□□□□ 0.66
PHRF1-204ENST00000532550 TUFT1Q9NNX1 390 aa19.2■□□□□ 0.66
PHRF1-204ENST00000532550 A0A087WWV3 80 aa19.19■□□□□ 0.66
PHRF1-204ENST00000532550 TNFRSF10AO00220 468 aa19.19■□□□□ 0.66
PHRF1-204ENST00000532550 CSPG5O95196 566 aa19.19■□□□□ 0.66
PHRF1-204ENST00000532550 SPATA31C1P0DKV0 1188 aa19.19■□□□□ 0.66
PHRF1-204ENST00000532550 KCNA5P22460 613 aa19.19■□□□□ 0.66
PHRF1-204ENST00000532550 PHKA2P46019 1235 aa19.19■□□□□ 0.66
PHRF1-204ENST00000532550 CSPP1Q1MSJ5 1256 aa19.19■□□□□ 0.66
PHRF1-204ENST00000532550 ZNF598Q86UK7 904 aaKnown RBP19.19■□□□□ 0.66
PHRF1-204ENST00000532550 CATSPER3Q86XQ3 398 aa19.19■□□□□ 0.66
PHRF1-204ENST00000532550 THNSL1Q8IYQ7 743 aa19.19■□□□□ 0.66
PHRF1-204ENST00000532550 RNF149Q8NC42 400 aa19.19■□□□□ 0.66
PHRF1-204ENST00000532550 POF1BQ8WVV4 589 aa19.19■□□□□ 0.66
PHRF1-204ENST00000532550 PPP2R3CQ969Q6 453 aa19.19■□□□□ 0.66
PHRF1-204ENST00000532550 PABPC5Q96DU9 382 aaKnown RBP19.19■□□□□ 0.66
PHRF1-204ENST00000532550 NACC1Q96RE7 527 aa19.19■□□□□ 0.66
PHRF1-204ENST00000532550 POLR3CQ9BUI4 534 aaPredicted RBP19.19■□□□□ 0.66
PHRF1-204ENST00000532550 TRAIPQ9BWF2 469 aa19.19■□□□□ 0.66
PHRF1-204ENST00000532550 CWH43Q9H720 699 aa19.19■□□□□ 0.66
PHRF1-204ENST00000532550 LAG3P18627 525 aa19.18■□□□□ 0.66
PHRF1-204ENST00000532550 RARRES1P49788 294 aa19.18■□□□□ 0.66
PHRF1-204ENST00000532550 UBE3AQ05086 875 aa19.18■□□□□ 0.66
PHRF1-204ENST00000532550 CAMK1Q14012 370 aa19.18■□□□□ 0.66
PHRF1-204ENST00000532550 TFDP1Q14186 410 aa19.18■□□□□ 0.66
PHRF1-204ENST00000532550 MCTP1Q6DN14 999 aa19.18■□□□□ 0.66
PHRF1-204ENST00000532550 LRRC43Q8N309 656 aa19.18■□□□□ 0.66
PHRF1-204ENST00000532550 COLGALT1Q8NBJ5 622 aa19.18■□□□□ 0.66
PHRF1-204ENST00000532550 MICAL1Q8TDZ2 1067 aa19.18■□□□□ 0.66
PHRF1-204ENST00000532550 IGFLR1Q9H665 355 aa19.18■□□□□ 0.66
PHRF1-204ENST00000532550 XPNPEP1Q9NQW7 623 aa19.18■□□□□ 0.66
PHRF1-204ENST00000532550 RNF19AQ9NV58 838 aa19.18■□□□□ 0.66
PHRF1-204ENST00000532550 KIAA1671Q9BY89 1806 aa19.18■□□□□ 0.66
PHRF1-204ENST00000532550 MED24O75448 989 aa19.17■□□□□ 0.66
PHRF1-204ENST00000532550 FGF18O76093 207 aa19.17■□□□□ 0.66
PHRF1-204ENST00000532550 CD2BP2O95400 341 aaKnown RBP19.17■□□□□ 0.66
PHRF1-204ENST00000532550 DNAJB1P25685 340 aa19.17■□□□□ 0.66
PHRF1-204ENST00000532550 GJB2P29033 226 aa19.17■□□□□ 0.66
PHRF1-204ENST00000532550 RAB27AP51159 221 aa19.17■□□□□ 0.66
PHRF1-204ENST00000532550 NCBP1Q09161 790 aaKnown RBP19.17■□□□□ 0.66
PHRF1-204ENST00000532550 LEXMQ3ZCV2 418 aa19.17■□□□□ 0.66
PHRF1-204ENST00000532550 CLLU1OSQ5K130 101 aa19.17■□□□□ 0.66
PHRF1-204ENST00000532550 LRRC55Q6ZSA7 311 aa19.17■□□□□ 0.66
PHRF1-204ENST00000532550 HELQQ8TDG4 1101 aa19.17■□□□□ 0.66
PHRF1-204ENST00000532550 MINDY3Q9H8M7 445 aa19.17■□□□□ 0.66
PHRF1-204ENST00000532550 AGPAT5Q9NUQ2 364 aa19.17■□□□□ 0.66
PHRF1-204ENST00000532550 FAM105AQ9NUU6 356 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms