RNA–Protein interactions for RNA: ENST00000531653.5

PSMC3-211, Transcript of proteasome 26S subunit, ATPase 3, human

TSL 2

Gene PSMC3, Length 498 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC3-211	ENST00000531653	LAMP2	P13473	410 aa		12.83	□□□□□ -0.36
PSMC3-211	ENST00000531653	MAGEA9	P43362	315 aa		12.83	□□□□□ -0.36
PSMC3-211	ENST00000531653	COL9A3	Q14050	684 aa	Predicted RBP	12.83	□□□□□ -0.36
PSMC3-211	ENST00000531653	LINC01465	Q8N7H1	131 aa		12.83	□□□□□ -0.36
PSMC3-211	ENST00000531653	SMARCC2	Q8TAQ2	1214 aa		12.83	□□□□□ -0.36
PSMC3-211	ENST00000531653	STAM	Q92783	540 aa		12.83	□□□□□ -0.36
PSMC3-211	ENST00000531653	COL26A1	Q96A83	441 aa		12.83	□□□□□ -0.36
PSMC3-211	ENST00000531653	ZNF707	Q96C28	371 aa	Predicted RBP	12.83	□□□□□ -0.36
PSMC3-211	ENST00000531653	ANGPTL2	Q9UKU9	493 aa		12.83	□□□□□ -0.36
PSMC3-211	ENST00000531653	USP18	Q9UMW8	372 aa		12.83	□□□□□ -0.36
PSMC3-211	ENST00000531653	WDR81	Q562E7	1941 aa		12.83	□□□□□ -0.36
PSMC3-211	ENST00000531653	RALGAPA1	Q6GYQ0	2036 aa		12.83	□□□□□ -0.36
PSMC3-211	ENST00000531653	IGF2R	P11717	2491 aa		12.82	□□□□□ -0.36
PSMC3-211	ENST00000531653	LRP3	O75074	770 aa		12.82	□□□□□ -0.36
PSMC3-211	ENST00000531653	TDGF1	P13385	188 aa		12.82	□□□□□ -0.36
PSMC3-211	ENST00000531653	ATP4A	P20648	1035 aa		12.82	□□□□□ -0.36
PSMC3-211	ENST00000531653	GBP2	P32456	591 aa	Predicted RBP	12.82	□□□□□ -0.36
PSMC3-211	ENST00000531653	CSTF1	Q05048	431 aa	Known RBP	12.82	□□□□□ -0.36
PSMC3-211	ENST00000531653	ZNF484	Q5JVG2	852 aa		12.82	□□□□□ -0.36
PSMC3-211	ENST00000531653	CLDN23	Q96B33	292 aa		12.82	□□□□□ -0.36
PSMC3-211	ENST00000531653	SHD	Q96IW2	340 aa		12.82	□□□□□ -0.36
PSMC3-211	ENST00000531653	UBAC1	Q9BSL1	405 aa		12.82	□□□□□ -0.36
PSMC3-211	ENST00000531653	TRAIP	Q9BWF2	469 aa		12.82	□□□□□ -0.36
PSMC3-211	ENST00000531653	BCO2	Q9BYV7	579 aa		12.82	□□□□□ -0.36
PSMC3-211	ENST00000531653	KRT23	Q9C075	422 aa		12.82	□□□□□ -0.36
PSMC3-211	ENST00000531653	ADAMTS10	Q9H324	1103 aa		12.82	□□□□□ -0.36
PSMC3-211	ENST00000531653	NRDE2	Q9H7Z3	1164 aa		12.82	□□□□□ -0.36
PSMC3-211	ENST00000531653	PRMT8	Q9NR22	394 aa	Predicted RBP	12.82	□□□□□ -0.36
PSMC3-211	ENST00000531653	KCNH7	Q9NS40	1196 aa		12.82	□□□□□ -0.36
PSMC3-211	ENST00000531653	PKD2L1	Q9P0L9	805 aa		12.82	□□□□□ -0.36
PSMC3-211	ENST00000531653	MTF2	Q9Y483	593 aa	Predicted RBP	12.82	□□□□□ -0.36
PSMC3-211	ENST00000531653	SETX	Q7Z333	2677 aa	Known RBP	12.82	□□□□□ -0.36
PSMC3-211	ENST00000531653	B4GALT3	O60512	393 aa		12.81	□□□□□ -0.36
PSMC3-211	ENST00000531653	CA8	P35219	290 aa		12.81	□□□□□ -0.36
PSMC3-211	ENST00000531653	PDE1A	P54750	535 aa		12.81	□□□□□ -0.36
PSMC3-211	ENST00000531653	ITGB3BP	Q13352	177 aa	Predicted RBP	12.81	□□□□□ -0.36
PSMC3-211	ENST00000531653	ABHD15	Q6UXT9	468 aa		12.81	□□□□□ -0.36
PSMC3-211	ENST00000531653	RSPO2	Q6UXX9	243 aa	Predicted RBP	12.81	□□□□□ -0.36
PSMC3-211	ENST00000531653	CYB5R4	Q7L1T6	521 aa		12.81	□□□□□ -0.36
PSMC3-211	ENST00000531653	CUL5	Q93034	780 aa		12.81	□□□□□ -0.36
PSMC3-211	ENST00000531653	SPZ1	Q9BXG8	430 aa		12.81	□□□□□ -0.36
PSMC3-211	ENST00000531653	EMILIN2	Q9BXX0	1053 aa		12.81	□□□□□ -0.36
PSMC3-211	ENST00000531653	FAM126A	Q9BYI3	521 aa	Predicted RBP	12.81	□□□□□ -0.36
PSMC3-211	ENST00000531653	CNNM2	Q9H8M5	875 aa		12.81	□□□□□ -0.36
PSMC3-211	ENST00000531653	MAN1C1	Q9NR34	630 aa		12.81	□□□□□ -0.36
PSMC3-211	ENST00000531653	SPATA6	Q9NWH7	488 aa	Predicted RBP	12.81	□□□□□ -0.36
PSMC3-211	ENST00000531653	FAM120A	Q9NZB2	1118 aa	Known RBP eCLIP	12.81	□□□□□ -0.36
PSMC3-211	ENST00000531653	STK39	Q9UEW8	545 aa		12.81	□□□□□ -0.36
PSMC3-211	ENST00000531653	DYNC1LI1	Q9Y6G9	523 aa	Known RBP	12.81	□□□□□ -0.36
PSMC3-211	ENST00000531653	F5	P12259	2224 aa		12.8	□□□□□ -0.36
PSMC3-211	ENST00000531653	CCDC195	A0A1B0GUA6	201 aa		12.8	□□□□□ -0.36
PSMC3-211	ENST00000531653	ZC3H11A	O75152	810 aa	Known RBP eCLIP	12.8	□□□□□ -0.36
PSMC3-211	ENST00000531653	EFEMP2	O95967	443 aa		12.8	□□□□□ -0.36
PSMC3-211	ENST00000531653	CCNE2	O96020	404 aa		12.8	□□□□□ -0.36
PSMC3-211	ENST00000531653	C1R	P00736	705 aa		12.8	□□□□□ -0.36
PSMC3-211	ENST00000531653	VTN	P04004	478 aa		12.8	□□□□□ -0.36
PSMC3-211	ENST00000531653	PROS1	P07225	676 aa		12.8	□□□□□ -0.36
PSMC3-211	ENST00000531653	ZSCAN20	P17040	1043 aa	Predicted RBP	12.8	□□□□□ -0.36
PSMC3-211	ENST00000531653	EIF4B	P23588	611 aa	Known RBP	12.8	□□□□□ -0.36
PSMC3-211	ENST00000531653	KLRC2	P26717	231 aa		12.8	□□□□□ -0.36
PSMC3-211	ENST00000531653	MFAP1	P55081	439 aa	Known RBP	12.8	□□□□□ -0.36
PSMC3-211	ENST00000531653	PRKCQ	Q04759	706 aa		12.8	□□□□□ -0.36
PSMC3-211	ENST00000531653	DMWD	Q09019	674 aa		12.8	□□□□□ -0.36
PSMC3-211	ENST00000531653	CCDC60	Q8IWA6	550 aa	Predicted RBP	12.8	□□□□□ -0.36
PSMC3-211	ENST00000531653	TMEM87A	Q8NBN3	555 aa		12.8	□□□□□ -0.36
PSMC3-211	ENST00000531653	HDAC7	Q8WUI4	952 aa		12.8	□□□□□ -0.36
PSMC3-211	ENST00000531653	RPP25	Q9BUL9	199 aa	Known RBP	12.8	□□□□□ -0.36
PSMC3-211	ENST00000531653	TBC1D13	Q9NVG8	400 aa		12.8	□□□□□ -0.36
PSMC3-211	ENST00000531653	PCDHB15	Q9Y5E8	787 aa		12.8	□□□□□ -0.36
PSMC3-211	ENST00000531653	NUMBL	Q9Y6R0	609 aa		12.8	□□□□□ -0.36
PSMC3-211	ENST00000531653	TM4SF5	O14894	197 aa		12.79	□□□□□ -0.36
PSMC3-211	ENST00000531653	INPPL1	O15357	1258 aa		12.79	□□□□□ -0.36
PSMC3-211	ENST00000531653	SMARCA1	P28370	1054 aa		12.79	□□□□□ -0.36
PSMC3-211	ENST00000531653	RPS9	P46781	194 aa	Known RBP	12.79	□□□□□ -0.36
PSMC3-211	ENST00000531653	SLC11A1	P49279	550 aa		12.79	□□□□□ -0.36
PSMC3-211	ENST00000531653	GPC5	P78333	572 aa		12.79	□□□□□ -0.36
PSMC3-211	ENST00000531653	MAPK8IP2	Q13387	824 aa	Predicted RBP	12.79	□□□□□ -0.36
PSMC3-211	ENST00000531653	FZD5	Q13467	585 aa		12.79	□□□□□ -0.36
PSMC3-211	ENST00000531653	MAMSTR	Q6ZN01	415 aa		12.79	□□□□□ -0.36
PSMC3-211	ENST00000531653	ZNF710	Q8N1W2	664 aa		12.79	□□□□□ -0.36
PSMC3-211	ENST00000531653	BBX	Q8WY36	941 aa	Predicted RBP	12.79	□□□□□ -0.36
PSMC3-211	ENST00000531653	PPP1R16B	Q96T49	567 aa		12.79	□□□□□ -0.36
PSMC3-211	ENST00000531653	MXRA8	Q9BRK3	442 aa		12.79	□□□□□ -0.36
PSMC3-211	ENST00000531653	DSCC1	Q9BVC3	393 aa		12.79	□□□□□ -0.36
PSMC3-211	ENST00000531653	SENP2	Q9HC62	589 aa		12.79	□□□□□ -0.36
PSMC3-211	ENST00000531653	LTB4R2	Q9NPC1	389 aa		12.79	□□□□□ -0.36
PSMC3-211	ENST00000531653	DNAJB4	Q9UDY4	337 aa		12.79	□□□□□ -0.36
PSMC3-211	ENST00000531653	GMEB2	Q9UKD1	530 aa		12.79	□□□□□ -0.36
PSMC3-211	ENST00000531653	SHISA7	A6NL88	538 aa		12.78	□□□□□ -0.36
PSMC3-211	ENST00000531653	RFPL2	O75678	378 aa		12.78	□□□□□ -0.36
PSMC3-211	ENST00000531653	RET	P07949	1114 aa		12.78	□□□□□ -0.36
PSMC3-211	ENST00000531653	DARS	P14868	501 aa	Known RBP	12.78	□□□□□ -0.36
PSMC3-211	ENST00000531653	NLRP11	P59045	1033 aa	Known RBP	12.78	□□□□□ -0.36
PSMC3-211	ENST00000531653	SPEM2	Q0P670	501 aa		12.78	□□□□□ -0.36
PSMC3-211	ENST00000531653	MLF2	Q15773	248 aa	Predicted RBP	12.78	□□□□□ -0.36
PSMC3-211	ENST00000531653	LAIR1	Q6GTX8	287 aa		12.78	□□□□□ -0.36
PSMC3-211	ENST00000531653	RNF168	Q8IYW5	571 aa	Predicted RBP	12.78	□□□□□ -0.36
PSMC3-211	ENST00000531653	RNF169	Q8NCN4	708 aa		12.78	□□□□□ -0.36
PSMC3-211	ENST00000531653	DDX1	Q92499	740 aa	Known RBP	12.78	□□□□□ -0.36
PSMC3-211	ENST00000531653	SMG7	Q92540	1137 aa	Known RBP	12.78	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 101.7 ms