RNA–Protein interactions for RNA: ENST00000531539.5

FOXR1-202, Transcript of forkhead box R1, humanhuman

TSL 1 (best)

Gene FOXR1, Length 1,053 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1-202ENST00000531539 CRIPAKQ8N1N5 446 aa16.09■□□□□ 0.17
FOXR1-202ENST00000531539 RNF149Q8NC42 400 aa16.09■□□□□ 0.17
FOXR1-202ENST00000531539 SP7Q8TDD2 431 aaPredicted RBP16.09■□□□□ 0.17
FOXR1-202ENST00000531539 C17orf80Q9BSJ5 609 aa16.09■□□□□ 0.17
FOXR1-202ENST00000531539 IFT122Q9HBG6 1241 aa16.09■□□□□ 0.17
FOXR1-202ENST00000531539 POLD4Q9HCU8 107 aa16.09■□□□□ 0.17
FOXR1-202ENST00000531539 RNF216Q9NWF9 866 aaPredicted RBP16.09■□□□□ 0.17
FOXR1-202ENST00000531539 DNM3Q9UQ16 869 aa16.09■□□□□ 0.17
FOXR1-202ENST00000531539 MTMR6Q9Y217 621 aa16.09■□□□□ 0.17
FOXR1-202ENST00000531539 PTPRSQ13332 1948 aa16.09■□□□□ 0.17
FOXR1-202ENST00000531539 E9PMD0 336 aa16.08■□□□□ 0.16
FOXR1-202ENST00000531539 ARL2P36404 184 aa16.08■□□□□ 0.16
FOXR1-202ENST00000531539 GATMP50440 423 aa16.08■□□□□ 0.16
FOXR1-202ENST00000531539 CEBPZQ03701 1054 aaKnown RBP16.08■□□□□ 0.16
FOXR1-202ENST00000531539 RESTQ13127 1097 aa16.08■□□□□ 0.16
FOXR1-202ENST00000531539 TFDP1Q14186 410 aa16.08■□□□□ 0.16
FOXR1-202ENST00000531539 CCDC85BQ15834 202 aaPredicted RBP16.08■□□□□ 0.16
FOXR1-202ENST00000531539 PAN2Q504Q3 1202 aaKnown RBP16.08■□□□□ 0.16
FOXR1-202ENST00000531539 FAM102BQ5T8I3 360 aa16.08■□□□□ 0.16
FOXR1-202ENST00000531539 SRGAP1Q7Z6B7 1085 aa16.08■□□□□ 0.16
FOXR1-202ENST00000531539 RNF169Q8NCN4 708 aa16.08■□□□□ 0.16
FOXR1-202ENST00000531539 MAFAQ8NHW3 353 aaPredicted RBP16.08■□□□□ 0.16
FOXR1-202ENST00000531539 ASAP3Q8TDY4 903 aa16.08■□□□□ 0.16
FOXR1-202ENST00000531539 ZNF689Q96CS4 500 aaPredicted RBP16.08■□□□□ 0.16
FOXR1-202ENST00000531539 PLIN2Q99541 437 aa16.08■□□□□ 0.16
FOXR1-202ENST00000531539 MMTAG2Q9BU76 263 aaKnown RBP16.08■□□□□ 0.16
FOXR1-202ENST00000531539 POLR3FQ9H1D9 316 aaPredicted RBP16.08■□□□□ 0.16
FOXR1-202ENST00000531539 BHMT2Q9H2M3 363 aa16.08■□□□□ 0.16
FOXR1-202ENST00000531539 GPRC5CQ9NQ84 441 aa16.08■□□□□ 0.16
FOXR1-202ENST00000531539 CHST12Q9NRB3 414 aa16.08■□□□□ 0.16
FOXR1-202ENST00000531539 CLIC4Q9Y696 253 aa16.08■□□□□ 0.16
FOXR1-202ENST00000531539 BMP15O95972 392 aa16.07■□□□□ 0.16
FOXR1-202ENST00000531539 CYP11B2P19099 503 aa16.07■□□□□ 0.16
FOXR1-202ENST00000531539 GLRA2P23416 452 aa16.07■□□□□ 0.16
FOXR1-202ENST00000531539 FOXD4L5Q5VV16 416 aaPredicted RBP16.07■□□□□ 0.16
FOXR1-202ENST00000531539 TMEM192Q8IY95 271 aa16.07■□□□□ 0.16
FOXR1-202ENST00000531539 FBXO22Q8NEZ5 403 aa16.07■□□□□ 0.16
FOXR1-202ENST00000531539 FOXD4L4Q8WXT5 416 aaPredicted RBP16.07■□□□□ 0.16
FOXR1-202ENST00000531539 ZSCAN16Q9H4T2 348 aaPredicted RBP16.07■□□□□ 0.16
FOXR1-202ENST00000531539 MINDY3Q9H8M7 445 aa16.07■□□□□ 0.16
FOXR1-202ENST00000531539 CHD9Q3L8U1 2897 aa16.06■□□□□ 0.16
FOXR1-202ENST00000531539 TTC3P53804 2025 aa16.06■□□□□ 0.16
FOXR1-202ENST00000531539 TBKBP1A7MCY6 615 aa16.06■□□□□ 0.16
FOXR1-202ENST00000531539 PHKA2P46019 1235 aa16.06■□□□□ 0.16
FOXR1-202ENST00000531539 PTENP60484 403 aa16.06■□□□□ 0.16
FOXR1-202ENST00000531539 GRB10Q13322 594 aa16.06■□□□□ 0.16
FOXR1-202ENST00000531539 EPC2Q52LR7 807 aa16.06■□□□□ 0.16
FOXR1-202ENST00000531539 TWF2Q6IBS0 349 aaKnown RBP16.06■□□□□ 0.16
FOXR1-202ENST00000531539 ECHDC2Q86YB7 292 aa16.06■□□□□ 0.16
FOXR1-202ENST00000531539 MICALL1Q8N3F8 863 aa16.06■□□□□ 0.16
FOXR1-202ENST00000531539 MCPH1Q8NEM0 835 aa16.06■□□□□ 0.16
FOXR1-202ENST00000531539 ELAC1Q9H777 363 aaKnown RBP16.06■□□□□ 0.16
FOXR1-202ENST00000531539 TMEM161AQ9NX61 479 aa16.06■□□□□ 0.16
FOXR1-202ENST00000531539 DACT1Q9NYF0 836 aa16.06■□□□□ 0.16
FOXR1-202ENST00000531539 PIN4Q9Y237 131 aaKnown RBP16.06■□□□□ 0.16
FOXR1-202ENST00000531539 ADGRA3Q8IWK6 1321 aa16.05■□□□□ 0.16
FOXR1-202ENST00000531539 A0A0U1RQF3 1178 aa16.05■□□□□ 0.16
FOXR1-202ENST00000531539 INO80B-WBP1J3KQ70 363 aa16.05■□□□□ 0.16
FOXR1-202ENST00000531539 GTPBP6O43824 516 aaPredicted RBP16.05■□□□□ 0.16
FOXR1-202ENST00000531539 EYA4O95677 639 aa16.05■□□□□ 0.16
FOXR1-202ENST00000531539 FGFR1P11362 822 aa16.05■□□□□ 0.16
FOXR1-202ENST00000531539 MARCKSP29966 332 aaPredicted RBP16.05■□□□□ 0.16
FOXR1-202ENST00000531539 BMPR1AP36894 532 aa16.05■□□□□ 0.16
FOXR1-202ENST00000531539 UBA7P41226 1012 aa16.05■□□□□ 0.16
FOXR1-202ENST00000531539 POU5F1BQ06416 359 aa16.05■□□□□ 0.16
FOXR1-202ENST00000531539 CAPSQ13938 189 aa16.05■□□□□ 0.16
FOXR1-202ENST00000531539 LONRF3Q496Y0 759 aa16.05■□□□□ 0.16
FOXR1-202ENST00000531539 CABP7Q86V35 215 aa16.05■□□□□ 0.16
FOXR1-202ENST00000531539 CMTR2Q8IYT2 770 aaKnown RBP16.05■□□□□ 0.16
FOXR1-202ENST00000531539 GDPD5Q8WTR4 605 aa16.05■□□□□ 0.16
FOXR1-202ENST00000531539 CDK5RAP3Q96JB5 506 aa16.05■□□□□ 0.16
FOXR1-202ENST00000531539 SAMD11Q96NU1 681 aa16.05■□□□□ 0.16
FOXR1-202ENST00000531539 PNMA5Q96PV4 448 aa16.05■□□□□ 0.16
FOXR1-202ENST00000531539 RC3H2Q9HBD1 1191 aaKnown RBP16.05■□□□□ 0.16
FOXR1-202ENST00000531539 LRRIQ4A6NIV6 560 aa16.04■□□□□ 0.16
FOXR1-202ENST00000531539 LPXNO60711 386 aa16.04■□□□□ 0.16
FOXR1-202ENST00000531539 SSBP05455 408 aaKnown RBP eCLIP16.04■□□□□ 0.16
FOXR1-202ENST00000531539 CTNNB1P35222 781 aa16.04■□□□□ 0.16
FOXR1-202ENST00000531539 GRIN1Q05586 938 aa16.04■□□□□ 0.16
FOXR1-202ENST00000531539 NCBP1Q09161 790 aaKnown RBP16.04■□□□□ 0.16
FOXR1-202ENST00000531539 GPM6BQ13491 265 aa16.04■□□□□ 0.16
FOXR1-202ENST00000531539 SPOUT1Q5T280 376 aaKnown RBP16.04■□□□□ 0.16
FOXR1-202ENST00000531539 KCNK18Q7Z418 384 aa16.04■□□□□ 0.16
FOXR1-202ENST00000531539 SLC17A8Q8NDX2 589 aa16.04■□□□□ 0.16
FOXR1-202ENST00000531539 TFIP11Q9UBB9 837 aaKnown RBP16.04■□□□□ 0.16
FOXR1-202ENST00000531539 MTCH2Q9Y6C9 303 aa16.04■□□□□ 0.16
FOXR1-202ENST00000531539 MRPL42Q9Y6G3 142 aaKnown RBP16.04■□□□□ 0.16
FOXR1-202ENST00000531539 ERLIN2O94905 339 aa16.03■□□□□ 0.16
FOXR1-202ENST00000531539 EOMESO95936 686 aa16.03■□□□□ 0.16
FOXR1-202ENST00000531539 HOXA11P31270 313 aaPredicted RBP16.03■□□□□ 0.16
FOXR1-202ENST00000531539 LONP1P36776 959 aaKnown RBP16.03■□□□□ 0.16
FOXR1-202ENST00000531539 PTPAQ15257 358 aa16.03■□□□□ 0.16
FOXR1-202ENST00000531539 CALML4Q96GE6 196 aa16.03■□□□□ 0.16
FOXR1-202ENST00000531539 AK8Q96MA6 479 aa16.03■□□□□ 0.16
FOXR1-202ENST00000531539 NT5C3AQ9H0P0 336 aa16.03■□□□□ 0.16
FOXR1-202ENST00000531539 TYW1Q9NV66 732 aaKnown RBP16.03■□□□□ 0.16
FOXR1-202ENST00000531539 H3BNC9 293 aa16.02■□□□□ 0.16
FOXR1-202ENST00000531539 HOXA2O43364 376 aa16.02■□□□□ 0.16
FOXR1-202ENST00000531539 RB1P06400 928 aa16.02■□□□□ 0.16
FOXR1-202ENST00000531539 SKIP12755 728 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms