RNA–Protein interactions for RNA: ENST00000531309.1

DKK3-210, Transcript of dickkopf WNT signaling pathway inhibitor 3, humanhuman

TSL 2

Gene DKK3, Length 707 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3-210ENST00000531309 GRXCR1A8MXD5 290 aa6.85□□□□□ -1.31
DKK3-210ENST00000531309 MPHOSPH10O00566 681 aaKnown RBP6.85□□□□□ -1.31
DKK3-210ENST00000531309 RGS9O75916 674 aaPredicted RBP6.85□□□□□ -1.31
DKK3-210ENST00000531309 SSBP05455 408 aaKnown RBP eCLIP6.85□□□□□ -1.31
DKK3-210ENST00000531309 PARP1P09874 1014 aaKnown RBP6.85□□□□□ -1.31
DKK3-210ENST00000531309 XBP1P17861 261 aa6.85□□□□□ -1.31
DKK3-210ENST00000531309 EPHB4P54760 987 aa6.85□□□□□ -1.31
DKK3-210ENST00000531309 KRT85P78386 507 aa6.85□□□□□ -1.31
DKK3-210ENST00000531309 LRRC14Q15048 493 aa6.85□□□□□ -1.31
DKK3-210ENST00000531309 CCL14Q16627 93 aa6.85□□□□□ -1.31
DKK3-210ENST00000531309 ABCB5Q2M3G0 1257 aa6.85□□□□□ -1.31
DKK3-210ENST00000531309 KRT40Q6A162 431 aa6.85□□□□□ -1.31
DKK3-210ENST00000531309 PSAPL1Q6NUJ1 521 aa6.85□□□□□ -1.31
DKK3-210ENST00000531309 TMEM179Q6ZVK1 233 aa6.85□□□□□ -1.31
DKK3-210ENST00000531309 BRAPQ7Z569 592 aa6.85□□□□□ -1.31
DKK3-210ENST00000531309 FERMT3Q86UX7 667 aa6.85□□□□□ -1.31
DKK3-210ENST00000531309 TRIM42Q8IWZ5 723 aa6.85□□□□□ -1.31
DKK3-210ENST00000531309 SRBD1Q8N5C6 995 aaKnown RBP6.85□□□□□ -1.31
DKK3-210ENST00000531309 GOLGA6L1Q8N7Z2 621 aa6.85□□□□□ -1.31
DKK3-210ENST00000531309 ZNF396Q96N95 335 aaPredicted RBP6.85□□□□□ -1.31
DKK3-210ENST00000531309 APBA2Q99767 749 aa6.85□□□□□ -1.31
DKK3-210ENST00000531309 EMILIN2Q9BXX0 1053 aa6.85□□□□□ -1.31
DKK3-210ENST00000531309 LACRTQ9GZZ8 138 aa6.85□□□□□ -1.31
DKK3-210ENST00000531309 NKX2-4Q9H2Z4 354 aa6.85□□□□□ -1.31
DKK3-210ENST00000531309 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.85□□□□□ -1.31
DKK3-210ENST00000531309 CABP5Q9NP86 173 aa6.85□□□□□ -1.31
DKK3-210ENST00000531309 NYAP2Q9P242 653 aa6.85□□□□□ -1.31
DKK3-210ENST00000531309 CLIP2Q9UDT6 1046 aa6.85□□□□□ -1.31
DKK3-210ENST00000531309 MAD2L2Q9UI95 211 aa6.85□□□□□ -1.31
DKK3-210ENST00000531309 ZNF112Q9UJU3 913 aa6.85□□□□□ -1.31
DKK3-210ENST00000531309 GDF2Q9UK05 429 aaPredicted RBP6.85□□□□□ -1.31
DKK3-210ENST00000531309 CFAP45Q9UL16 551 aa6.85□□□□□ -1.31
DKK3-210ENST00000531309 EFR3BQ9Y2G0 817 aa6.85□□□□□ -1.31
DKK3-210ENST00000531309 AFG3L2Q9Y4W6 797 aa6.85□□□□□ -1.31
DKK3-210ENST00000531309 BRWD1Q9NSI6 2320 aa6.84□□□□□ -1.31
DKK3-210ENST00000531309 COL4A4P53420 1690 aaPredicted RBP6.84□□□□□ -1.31
DKK3-210ENST00000531309 CNTNAP5Q8WYK1 1306 aa6.84□□□□□ -1.31
DKK3-210ENST00000531309 H3BM21 787 aa6.84□□□□□ -1.31
DKK3-210ENST00000531309 LCE2BO14633 110 aa6.84□□□□□ -1.31
DKK3-210ENST00000531309 EIF4EBP3O60516 100 aaPredicted RBP6.84□□□□□ -1.31
DKK3-210ENST00000531309 KRT37O76014 449 aa6.84□□□□□ -1.31
DKK3-210ENST00000531309 PLEKHA8P1O95397 391 aa6.84□□□□□ -1.31
DKK3-210ENST00000531309 ESRRAP11474 423 aaPredicted RBP6.84□□□□□ -1.31
DKK3-210ENST00000531309 NCLP19338 710 aaKnown RBP6.84□□□□□ -1.31
DKK3-210ENST00000531309 BMP6P22004 513 aa6.84□□□□□ -1.31
DKK3-210ENST00000531309 MAPK4P31152 587 aa6.84□□□□□ -1.31
DKK3-210ENST00000531309 GUCY1A2P33402 732 aa6.84□□□□□ -1.31
DKK3-210ENST00000531309 SOX9P48436 509 aa6.84□□□□□ -1.31
DKK3-210ENST00000531309 NASPP49321 788 aaPredicted RBP6.84□□□□□ -1.31
DKK3-210ENST00000531309 GUCY1B3Q02153 619 aa6.84□□□□□ -1.31
DKK3-210ENST00000531309 TLE2Q04725 743 aa6.84□□□□□ -1.31
DKK3-210ENST00000531309 IKBKEQ14164 716 aa6.84□□□□□ -1.31
DKK3-210ENST00000531309 SAFBQ15424 915 aaKnown RBP eCLIP6.84□□□□□ -1.31
DKK3-210ENST00000531309 PKN1Q16512 942 aa6.84□□□□□ -1.31
DKK3-210ENST00000531309 FOXD4L6Q3SYB3 417 aaPredicted RBP6.84□□□□□ -1.31
DKK3-210ENST00000531309 ASPRV1Q53RT3 343 aa6.84□□□□□ -1.31
DKK3-210ENST00000531309 TREML2Q5T2D2 321 aa6.84□□□□□ -1.31
DKK3-210ENST00000531309 ADAMTSL4Q6UY14 1074 aa6.84□□□□□ -1.31
DKK3-210ENST00000531309 FOXD4L3Q6VB84 417 aaPredicted RBP6.84□□□□□ -1.31
DKK3-210ENST00000531309 FAM177A1Q8N128 213 aaPredicted RBP6.84□□□□□ -1.31
DKK3-210ENST00000531309 GPR161Q8N6U8 529 aaKnown RBP6.84□□□□□ -1.31
DKK3-210ENST00000531309 NKD1Q969G9 470 aa6.84□□□□□ -1.31
DKK3-210ENST00000531309 FERMT2Q96AC1 680 aa6.84□□□□□ -1.31
DKK3-210ENST00000531309 MFSD14AQ96MC6 490 aa6.84□□□□□ -1.31
DKK3-210ENST00000531309 AIFM3Q96NN9 605 aa6.84□□□□□ -1.31
DKK3-210ENST00000531309 SCAND2PQ9GZW5 306 aaPredicted RBP6.84□□□□□ -1.31
DKK3-210ENST00000531309 MIR1-1HGQ9H1L0 117 aa6.84□□□□□ -1.31
DKK3-210ENST00000531309 MTIF3Q9H2K0 278 aaKnown RBP6.84□□□□□ -1.31
DKK3-210ENST00000531309 GINM1Q9NU53 330 aa6.84□□□□□ -1.31
DKK3-210ENST00000531309 STRIP2Q9ULQ0 834 aa6.84□□□□□ -1.31
DKK3-210ENST00000531309 SYNPO2Q9UMS6 1093 aa6.84□□□□□ -1.31
DKK3-210ENST00000531309 CNPY2Q9Y2B0 182 aa6.84□□□□□ -1.31
DKK3-210ENST00000531309 WDFY4Q6ZS81 3184 aa6.84□□□□□ -1.31
DKK3-210ENST00000531309 MYH6P13533 1939 aa6.84□□□□□ -1.32
DKK3-210ENST00000531309 TCHHQ07283 1943 aa6.84□□□□□ -1.32
DKK3-210ENST00000531309 KMT2EQ8IZD2 1858 aa6.83□□□□□ -1.32
DKK3-210ENST00000531309 BAHCC1Q9P281 2608 aa6.83□□□□□ -1.32
DKK3-210ENST00000531309 ELP1O95163 1332 aa6.83□□□□□ -1.32
DKK3-210ENST00000531309 KLRF2D3W0D1 207 aa6.83□□□□□ -1.32
DKK3-210ENST00000531309 PQBP1O60828 265 aaKnown RBP6.83□□□□□ -1.32
DKK3-210ENST00000531309 MBD3O95983 291 aa6.83□□□□□ -1.32
DKK3-210ENST00000531309 MMP1P03956 469 aa6.83□□□□□ -1.32
DKK3-210ENST00000531309 SLURP2P0DP57 97 aa6.83□□□□□ -1.32
DKK3-210ENST00000531309 SNHG28P0DPA3 235 aa6.83□□□□□ -1.32
DKK3-210ENST00000531309 PDHBP11177 359 aa6.83□□□□□ -1.32
DKK3-210ENST00000531309 EEF2P13639 858 aaKnown RBP6.83□□□□□ -1.32
DKK3-210ENST00000531309 U2AF2P26368 475 aaKnown RBP eCLIP6.83□□□□□ -1.32
DKK3-210ENST00000531309 ARNTP27540 789 aa6.83□□□□□ -1.32
DKK3-210ENST00000531309 ADCYAP1R1P41586 468 aa6.83□□□□□ -1.32
DKK3-210ENST00000531309 IRX3P78415 501 aaPredicted RBP6.83□□□□□ -1.32
DKK3-210ENST00000531309 PPIGQ13427 754 aaKnown RBP eCLIP6.83□□□□□ -1.32
DKK3-210ENST00000531309 SEPT2Q15019 361 aa6.83□□□□□ -1.32
DKK3-210ENST00000531309 SNX17Q15036 470 aa6.83□□□□□ -1.32
DKK3-210ENST00000531309 PFKFB3Q16875 520 aaPredicted RBP6.83□□□□□ -1.32
DKK3-210ENST00000531309 KLHL40Q2TBA0 621 aa6.83□□□□□ -1.32
DKK3-210ENST00000531309 SCARA3Q6AZY7 606 aa6.83□□□□□ -1.32
DKK3-210ENST00000531309 GDF6Q6KF10 455 aaPredicted RBP6.83□□□□□ -1.32
DKK3-210ENST00000531309 FAM173BQ6P4H8 233 aa6.83□□□□□ -1.32
DKK3-210ENST00000531309 SLCO4C1Q6ZQN7 724 aa6.83□□□□□ -1.32
DKK3-210ENST00000531309 SIAH1Q8IUQ4 282 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms