RNA–Protein interactions for RNA: ENST00000530727.5

PTPRC-214, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 1,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-214ENST00000530727 NINLQ9Y2I6 1382 aa5.2□□□□□ -1.58
PTPRC-214ENST00000530727 TOPAZ1Q8N9V7 1692 aa5.19□□□□□ -1.58
PTPRC-214ENST00000530727 A0A0G2JLL6 359 aaPredicted RBP5.19□□□□□ -1.58
PTPRC-214ENST00000530727 CYP7B1O75881 506 aa5.19□□□□□ -1.58
PTPRC-214ENST00000530727 EPHA5P54756 1037 aa5.19□□□□□ -1.58
PTPRC-214ENST00000530727 GJA9P57773 515 aa5.19□□□□□ -1.58
PTPRC-214ENST00000530727 OS9Q13438 667 aaPredicted RBP5.19□□□□□ -1.58
PTPRC-214ENST00000530727 SAFB2Q14151 953 aaKnown RBP eCLIP5.19□□□□□ -1.58
PTPRC-214ENST00000530727 LILRA6Q6PI73 481 aa5.19□□□□□ -1.58
PTPRC-214ENST00000530727 CLEC4GQ6UXB4 293 aa5.19□□□□□ -1.58
PTPRC-214ENST00000530727 OSTM1Q86WC4 334 aa5.19□□□□□ -1.58
PTPRC-214ENST00000530727 PTRH1Q86Y79 214 aaKnown RBP5.19□□□□□ -1.58
PTPRC-214ENST00000530727 ADAMTS17Q8TE56 1095 aa5.19□□□□□ -1.58
PTPRC-214ENST00000530727 CDK19Q9BWU1 502 aa5.19□□□□□ -1.58
PTPRC-214ENST00000530727 FAM126AQ9BYI3 521 aaPredicted RBP5.19□□□□□ -1.58
PTPRC-214ENST00000530727 HSPBP1Q9NZL4 362 aa5.19□□□□□ -1.58
PTPRC-214ENST00000530727 POGKQ9P215 609 aa5.19□□□□□ -1.58
PTPRC-214ENST00000530727 ANKRD36BQ8N2N9 1353 aa5.19□□□□□ -1.58
PTPRC-214ENST00000530727 AKAP12Q02952 1782 aa5.18□□□□□ -1.58
PTPRC-214ENST00000530727 NWD1Q149M9 1564 aa5.18□□□□□ -1.58
PTPRC-214ENST00000530727 DDX3XO00571 662 aaKnown RBP eCLIP5.18□□□□□ -1.585e-7■■■■■ 31.5
PTPRC-214ENST00000530727 LDHAP00338 332 aaKnown RBP5.18□□□□□ -1.58
PTPRC-214ENST00000530727 BTBD8Q5XKL5 378 aa5.18□□□□□ -1.58
PTPRC-214ENST00000530727 ZNF761Q86XN6 746 aaPredicted RBP5.18□□□□□ -1.58
PTPRC-214ENST00000530727 CISD2Q8N5K1 135 aaKnown RBP5.18□□□□□ -1.58
PTPRC-214ENST00000530727 PNISRQ8TF01 805 aaKnown RBP5.18□□□□□ -1.58
PTPRC-214ENST00000530727 DLL4Q9NR61 685 aa5.18□□□□□ -1.58
PTPRC-214ENST00000530727 RIC8BQ9NVN3 520 aa5.18□□□□□ -1.58
PTPRC-214ENST00000530727 WASF3Q9UPY6 502 aa5.18□□□□□ -1.58
PTPRC-214ENST00000530727 COQ6Q9Y2Z9 468 aa5.18□□□□□ -1.58
PTPRC-214ENST00000530727 ATP23Q9Y6H3 246 aa5.18□□□□□ -1.58
PTPRC-214ENST00000530727 NPHP4O75161 1426 aaPredicted RBP5.18□□□□□ -1.58
PTPRC-214ENST00000530727 MYBBP1AQ9BQG0 1328 aaKnown RBP5.18□□□□□ -1.58
PTPRC-214ENST00000530727 RGPD8O14715 1765 aaPredicted RBP5.18□□□□□ -1.58
PTPRC-214ENST00000530727 STRCQ7RTU9 1775 aa5.18□□□□□ -1.58
PTPRC-214ENST00000530727 ATP7BP35670 1465 aa5.18□□□□□ -1.58
PTPRC-214ENST00000530727 LMTK3Q96Q04 1460 aa5.18□□□□□ -1.58
PTPRC-214ENST00000530727 BRD4O60885 1362 aaPredicted RBP5.18□□□□□ -1.58
PTPRC-214ENST00000530727 PLD2O14939 933 aa5.18□□□□□ -1.58
PTPRC-214ENST00000530727 CNGA1P29973 690 aa5.18□□□□□ -1.58
PTPRC-214ENST00000530727 JAM2P57087 298 aa5.18□□□□□ -1.58
PTPRC-214ENST00000530727 NFE2Q16621 373 aaPredicted RBP5.18□□□□□ -1.58
PTPRC-214ENST00000530727 FIGNQ5HY92 759 aa5.18□□□□□ -1.58
PTPRC-214ENST00000530727 PRR31Q5SQ13 230 aa5.18□□□□□ -1.58
PTPRC-214ENST00000530727 SYCP2LQ5T4T6 812 aa5.18□□□□□ -1.58
PTPRC-214ENST00000530727 MCTP2Q6DN12 878 aa5.18□□□□□ -1.58
PTPRC-214ENST00000530727 FGD2Q7Z6J4 655 aa5.18□□□□□ -1.58
PTPRC-214ENST00000530727 FAM9BQ8IZU0 186 aa5.18□□□□□ -1.58
PTPRC-214ENST00000530727 SCLYQ96I15 445 aa5.18□□□□□ -1.58
PTPRC-214ENST00000530727 C20orf173Q96LM9 149 aa5.18□□□□□ -1.58
PTPRC-214ENST00000530727 PDGFDQ9GZP0 370 aaPredicted RBP5.18□□□□□ -1.58
PTPRC-214ENST00000530727 ADAM7Q9H2U9 754 aa5.18□□□□□ -1.58
PTPRC-214ENST00000530727 L2HGDHQ9H9P8 463 aa5.18□□□□□ -1.58
PTPRC-214ENST00000530727 KNSTRNQ9Y448 316 aa5.18□□□□□ -1.58
PTPRC-214ENST00000530727 MON2Q7Z3U7 1717 aa5.18□□□□□ -1.58
PTPRC-214ENST00000530727 ANKRD26Q9UPS8 1709 aa5.18□□□□□ -1.58
PTPRC-214ENST00000530727 CPSF1Q10570 1443 aaKnown RBP5.18□□□□□ -1.58
PTPRC-214ENST00000530727 NALCNQ8IZF0 1738 aa5.17□□□□□ -1.58
PTPRC-214ENST00000530727 A0A1W2PP64 1363 aa5.17□□□□□ -1.58
PTPRC-214ENST00000530727 MAN2B1O00754 1011 aa5.17□□□□□ -1.58
PTPRC-214ENST00000530727 KCNK3O14649 394 aa5.17□□□□□ -1.58
PTPRC-214ENST00000530727 PLIN1O60240 522 aa5.17□□□□□ -1.58
PTPRC-214ENST00000530727 CAND2O75155 1236 aa5.17□□□□□ -1.58
PTPRC-214ENST00000530727 ALDH1L1O75891 902 aa5.17□□□□□ -1.58
PTPRC-214ENST00000530727 AMY2AP04746 511 aa5.17□□□□□ -1.58
PTPRC-214ENST00000530727 ENO2P09104 434 aaPredicted RBP5.17□□□□□ -1.58
PTPRC-214ENST00000530727 KCNA6P17658 529 aa5.17□□□□□ -1.58
PTPRC-214ENST00000530727 PTPN1P18031 435 aaKnown RBP5.17□□□□□ -1.58
PTPRC-214ENST00000530727 AMY2BP19961 511 aa5.17□□□□□ -1.58
PTPRC-214ENST00000530727 DHX8Q14562 1220 aaKnown RBP5.17□□□□□ -1.58
PTPRC-214ENST00000530727 NFIXQ14938 502 aa5.17□□□□□ -1.58
PTPRC-214ENST00000530727 LRRC41Q15345 812 aa5.17□□□□□ -1.58
PTPRC-214ENST00000530727 DALRD3Q5D0E6 543 aaKnown RBP5.17□□□□□ -1.58
PTPRC-214ENST00000530727 CD276Q5ZPR3 534 aa5.17□□□□□ -1.58
PTPRC-214ENST00000530727 FRMD5Q7Z6J6 570 aa5.17□□□□□ -1.58
PTPRC-214ENST00000530727 PROSER1Q86XN7 944 aa5.17□□□□□ -1.58
PTPRC-214ENST00000530727 GPATCH11Q8N954 259 aa5.17□□□□□ -1.58
PTPRC-214ENST00000530727 RELTQ969Z4 430 aa5.17□□□□□ -1.58
PTPRC-214ENST00000530727 SLC39A13Q96H72 371 aa5.17□□□□□ -1.58
PTPRC-214ENST00000530727 CELF4Q9BZC1 486 aaKnown RBP5.17□□□□□ -1.58
PTPRC-214ENST00000530727 TRIM39Q9HCM9 518 aa5.17□□□□□ -1.58
PTPRC-214ENST00000530727 CHST12Q9NRB3 414 aa5.17□□□□□ -1.58
PTPRC-214ENST00000530727 RTEL1Q9NZ71 1219 aa5.17□□□□□ -1.58
PTPRC-214ENST00000530727 STRCP1A6NGW2 1772 aa5.17□□□□□ -1.58
PTPRC-214ENST00000530727 NSD3Q9BZ95 1437 aa5.17□□□□□ -1.58
PTPRC-214ENST00000530727 FMN2Q9NZ56 1722 aa5.17□□□□□ -1.58
PTPRC-214ENST00000530727 TCRBV16S1A1N1A0A5B0 115 aa5.16□□□□□ -1.58
PTPRC-214ENST00000530727 ZNF561-AS1K7EIQ3 104 aa5.16□□□□□ -1.58
PTPRC-214ENST00000530727 ACOT7O00154 380 aa5.16□□□□□ -1.58
PTPRC-214ENST00000530727 KCNQ2O43526 872 aa5.16□□□□□ -1.58
PTPRC-214ENST00000530727 TSPAN6O43657 245 aa5.16□□□□□ -1.58
PTPRC-214ENST00000530727 CYP1A1P04798 512 aaPredicted RBP5.16□□□□□ -1.58
PTPRC-214ENST00000530727 KRT18P05783 430 aaKnown RBP5.16□□□□□ -1.58
PTPRC-214ENST00000530727 CKMP06732 381 aa5.16□□□□□ -1.58
PTPRC-214ENST00000530727 ZNF28P17035 718 aa5.16□□□□□ -1.58
PTPRC-214ENST00000530727 SKIDA1Q1XH10 827 aa5.16□□□□□ -1.58
PTPRC-214ENST00000530727 FAM26FQ5R3K3 315 aa5.16□□□□□ -1.58
PTPRC-214ENST00000530727 CC2D1BQ5T0F9 858 aaKnown RBP5.16□□□□□ -1.58
PTPRC-214ENST00000530727 PHF19Q5T6S3 580 aa5.16□□□□□ -1.58
PTPRC-214ENST00000530727 DTX3Q8N9I9 347 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms