RNA–Protein interactions for RNA: ENST00000530705.5

TPT1-212, Transcript of tumor protein, translationally-controlled 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TPT1, Length 4,735 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPT1-212ENST00000530705 HOMER3Q9NSC5 361 aa12.9□□□□□ -0.34
TPT1-212ENST00000530705 RCOR1Q9UKL0 485 aa12.9□□□□□ -0.34
TPT1-212ENST00000530705 FNDC3AQ9Y2H6 1198 aaKnown RBP12.9□□□□□ -0.34
TPT1-212ENST00000530705 CALB1P05937 261 aa12.9□□□□□ -0.34
TPT1-212ENST00000530705 COPB1P53618 953 aaKnown RBP12.9□□□□□ -0.34
TPT1-212ENST00000530705 TSTA3Q13630 321 aaPredicted RBP12.9□□□□□ -0.34
TPT1-212ENST00000530705 SV2CQ496J9 727 aa12.9□□□□□ -0.34
TPT1-212ENST00000530705 PRIMPOLQ96LW4 560 aa12.9□□□□□ -0.34
TPT1-212ENST00000530705 MRPL9Q9BYD2 267 aaKnown RBP12.9□□□□□ -0.34
TPT1-212ENST00000530705 SYNPO2Q9UMS6 1093 aa12.9□□□□□ -0.34
TPT1-212ENST00000530705 PPME1Q9Y570 386 aa12.9□□□□□ -0.34
TPT1-212ENST00000530705 POTEMA6NI47 508 aa12.9□□□□□ -0.35
TPT1-212ENST00000530705 DSG3P32926 999 aa12.9□□□□□ -0.35
TPT1-212ENST00000530705 KPNA2P52292 529 aaKnown RBP12.9□□□□□ -0.35
TPT1-212ENST00000530705 CYB5R4Q7L1T6 521 aa12.9□□□□□ -0.35
TPT1-212ENST00000530705 SFR1Q86XK3 245 aa12.9□□□□□ -0.35
TPT1-212ENST00000530705 RAD54LQ92698 747 aa12.9□□□□□ -0.35
TPT1-212ENST00000530705 NGRNQ9NPE2 291 aaKnown RBP12.9□□□□□ -0.35
TPT1-212ENST00000530705 MAGED2Q9UNF1 606 aaPredicted RBP12.9□□□□□ -0.35
TPT1-212ENST00000530705 SH3BP1Q9Y3L3 701 aa12.9□□□□□ -0.35
TPT1-212ENST00000530705 RAB27AP51159 221 aa12.89□□□□□ -0.35
TPT1-212ENST00000530705 TFDP2Q14188 446 aa12.89□□□□□ -0.35
TPT1-212ENST00000530705 RWDD4Q6NW29 188 aaKnown RBP12.89□□□□□ -0.35
TPT1-212ENST00000530705 CD302Q8IX05 232 aa12.89□□□□□ -0.35
TPT1-212ENST00000530705 UPF1Q92900 1129 aaKnown RBP eCLIP12.89□□□□□ -0.35
TPT1-212ENST00000530705 ZNF512Q96ME7 567 aaPredicted RBP12.89□□□□□ -0.35
TPT1-212ENST00000530705 KRT12Q99456 494 aa12.89□□□□□ -0.35
TPT1-212ENST00000530705 C17orf75Q9HAS0 396 aa12.89□□□□□ -0.35
TPT1-212ENST00000530705 TUBE1Q9UJT0 475 aa12.89□□□□□ -0.35
TPT1-212ENST00000530705 SLC15A5A6NIM6 579 aa12.89□□□□□ -0.35
TPT1-212ENST00000530705 HMGB1P1B2RPK0 211 aaPredicted RBP12.89□□□□□ -0.35
TPT1-212ENST00000530705 CDK17Q00537 523 aa12.89□□□□□ -0.35
TPT1-212ENST00000530705 KRT39Q6A163 491 aa12.89□□□□□ -0.35
TPT1-212ENST00000530705 IQSEC1Q6DN90 963 aa12.89□□□□□ -0.35
TPT1-212ENST00000530705 EFCAB12Q6NXP0 572 aa12.89□□□□□ -0.35
TPT1-212ENST00000530705 ANKS4BQ8N8V4 417 aa12.89□□□□□ -0.35
TPT1-212ENST00000530705 SPDYE1Q8NFV5 336 aaPredicted RBP12.89□□□□□ -0.35
TPT1-212ENST00000530705 THAP9Q9H5L6 903 aa12.89□□□□□ -0.35
TPT1-212ENST00000530705 HAUS4Q9H6D7 363 aa12.89□□□□□ -0.35
TPT1-212ENST00000530705 FAM217BQ9NTX9 383 aaPredicted RBP12.89□□□□□ -0.35
TPT1-212ENST00000530705 IPPQ9Y573 584 aa12.89□□□□□ -0.35
TPT1-212ENST00000530705 ANGPTL3Q9Y5C1 460 aa12.89□□□□□ -0.35
TPT1-212ENST00000530705 PCDHB6Q9Y5E3 794 aa12.89□□□□□ -0.35
TPT1-212ENST00000530705 TOMM70O94826 608 aa12.89□□□□□ -0.35
TPT1-212ENST00000530705 PTPAQ15257 358 aa12.89□□□□□ -0.35
TPT1-212ENST00000530705 NECAB2Q7Z6G3 386 aa12.89□□□□□ -0.35
TPT1-212ENST00000530705 SIRT2Q8IXJ6 389 aa12.89□□□□□ -0.35
TPT1-212ENST00000530705 DNAAF3Q8N9W5 541 aa12.89□□□□□ -0.35
TPT1-212ENST00000530705 CAPNS2Q96L46 248 aa12.89□□□□□ -0.35
TPT1-212ENST00000530705 DEPDC5O75140 1603 aa12.89□□□□□ -0.35
TPT1-212ENST00000530705 PQBP1O60828 265 aaKnown RBP12.88□□□□□ -0.35
TPT1-212ENST00000530705 SDC4P31431 198 aa12.88□□□□□ -0.35
TPT1-212ENST00000530705 NDUFA8P51970 172 aa12.88□□□□□ -0.35
TPT1-212ENST00000530705 PRKCEQ02156 737 aa12.88□□□□□ -0.35
TPT1-212ENST00000530705 TMC7Q7Z402 723 aa12.88□□□□□ -0.35
TPT1-212ENST00000530705 UBLCP1Q8WVY7 318 aaPredicted RBP12.88□□□□□ -0.35
TPT1-212ENST00000530705 SELENOSQ9BQE4 189 aa12.88□□□□□ -0.35
TPT1-212ENST00000530705 CBX8Q9HC52 389 aa12.88□□□□□ -0.35
TPT1-212ENST00000530705 RRAGDQ9NQL2 400 aaPredicted RBP12.88□□□□□ -0.35
TPT1-212ENST00000530705 ASNSD1Q9NWL6 643 aa12.88□□□□□ -0.35
TPT1-212ENST00000530705 RWDD2AQ9UIY3 292 aa12.88□□□□□ -0.35
TPT1-212ENST00000530705 MTMR3Q13615 1198 aa12.88□□□□□ -0.35
TPT1-212ENST00000530705 TMEM132DQ14C87 1099 aa12.88□□□□□ -0.35
TPT1-212ENST00000530705 EMC2Q15006 297 aa12.88□□□□□ -0.35
TPT1-212ENST00000530705 GMCL1P1Q8NEA9 526 aa12.88□□□□□ -0.35
TPT1-212ENST00000530705 AGBL1Q96MI9 1066 aa12.88□□□□□ -0.35
TPT1-212ENST00000530705 POTECB2RU33 542 aa12.88□□□□□ -0.35
TPT1-212ENST00000530705 LRRN2O75325 713 aa12.88□□□□□ -0.35
TPT1-212ENST00000530705 EGFRP00533 1210 aa12.88□□□□□ -0.35
TPT1-212ENST00000530705 HSPA6P17066 643 aa12.88□□□□□ -0.35
TPT1-212ENST00000530705 GRIK1P39086 918 aa12.88□□□□□ -0.35
TPT1-212ENST00000530705 NFIAQ12857 509 aa12.88□□□□□ -0.35
TPT1-212ENST00000530705 ACCSLQ4AC99 568 aa12.88□□□□□ -0.35
TPT1-212ENST00000530705 TRIM72Q6ZMU5 477 aa12.88□□□□□ -0.35
TPT1-212ENST00000530705 ARHGEF18Q6ZSZ5 1173 aa12.88□□□□□ -0.35
TPT1-212ENST00000530705 HVCN1Q96D96 273 aa12.88□□□□□ -0.35
TPT1-212ENST00000530705 FAM163AQ96GL9 167 aaPredicted RBP12.88□□□□□ -0.35
TPT1-212ENST00000530705 CALR3Q96L12 384 aaKnown RBP12.88□□□□□ -0.35
TPT1-212ENST00000530705 CALN1Q9BXU9 219 aa12.88□□□□□ -0.35
TPT1-212ENST00000530705 MAGEB5Q9BZ81 275 aa12.88□□□□□ -0.35
TPT1-212ENST00000530705 ASCC2Q9H1I8 757 aaPredicted RBP12.88□□□□□ -0.35
TPT1-212ENST00000530705 ZC3H4Q9UPT8 1303 aaKnown RBP12.88□□□□□ -0.35
TPT1-212ENST00000530705 EVI5O60447 810 aa12.88□□□□□ -0.35
TPT1-212ENST00000530705 TCP1P17987 556 aaKnown RBP12.88□□□□□ -0.35
TPT1-212ENST00000530705 CCHCR1Q8TD31 782 aa12.88□□□□□ -0.35
TPT1-212ENST00000530705 MMTAG2Q9BU76 263 aaKnown RBP12.88□□□□□ -0.35
TPT1-212ENST00000530705 EDEM3Q9BZQ6 932 aa12.88□□□□□ -0.35
TPT1-212ENST00000530705 SCAF8Q9UPN6 1271 aaKnown RBP12.88□□□□□ -0.35
TPT1-212ENST00000530705 PI4K2BG5E9Z4 385 aa12.87□□□□□ -0.35
TPT1-212ENST00000530705 NR3C1P04150 777 aa12.87□□□□□ -0.35
TPT1-212ENST00000530705 CALRP27797 417 aaKnown RBP12.87□□□□□ -0.35
TPT1-212ENST00000530705 SNRPFP62306 86 aaKnown RBP12.87□□□□□ -0.35
TPT1-212ENST00000530705 RPS6KA2Q15349 733 aa12.87□□□□□ -0.35
TPT1-212ENST00000530705 RAB44Q7Z6P3 723 aaPredicted RBP12.87□□□□□ -0.35
TPT1-212ENST00000530705 MRPS31Q92665 395 aaKnown RBP12.87□□□□□ -0.35
TPT1-212ENST00000530705 RBSNQ9H1K0 784 aa12.87□□□□□ -0.35
TPT1-212ENST00000530705 VPS37BQ9H9H4 285 aa12.87□□□□□ -0.35
TPT1-212ENST00000530705 TMEM260Q9NX78 707 aa12.87□□□□□ -0.35
TPT1-212ENST00000530705 TCF7P36402 384 aaPredicted RBP12.87□□□□□ -0.35
TPT1-212ENST00000530705 NLRP11P59045 1033 aaKnown RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms