RNA–Protein interactions for RNA: ENST00000529963.1

AMBRA1-209, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best)

Gene AMBRA1, Length 1,529 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-209ENST00000529963 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.55□□□□□ -1.36
AMBRA1-209ENST00000529963 NYXQ9GZU5 481 aa6.55□□□□□ -1.36
AMBRA1-209ENST00000529963 TAF1DQ9H5J8 278 aaPredicted RBP6.55□□□□□ -1.36
AMBRA1-209ENST00000529963 ZNF277Q9NRM2 450 aaPredicted RBP6.55□□□□□ -1.36
AMBRA1-209ENST00000529963 CATSPERZQ9NTU4 200 aa6.55□□□□□ -1.36
AMBRA1-209ENST00000529963 CBLCQ9ULV8 474 aa6.55□□□□□ -1.36
AMBRA1-209ENST00000529963 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.55□□□□□ -1.36
AMBRA1-209ENST00000529963 ARFGEF2Q9Y6D5 1785 aa6.55□□□□□ -1.36
AMBRA1-209ENST00000529963 WDR33Q9C0J8 1336 aaKnown RBP6.55□□□□□ -1.36
AMBRA1-209ENST00000529963 CCDC66A2RUB6 948 aa6.55□□□□□ -1.36
AMBRA1-209ENST00000529963 ERVV-1B6SEH8 477 aa6.55□□□□□ -1.36
AMBRA1-209ENST00000529963 KCNK3O14649 394 aa6.55□□□□□ -1.36
AMBRA1-209ENST00000529963 SGSM2O43147 1006 aa6.55□□□□□ -1.36
AMBRA1-209ENST00000529963 SRGAP3O43295 1099 aa6.55□□□□□ -1.36
AMBRA1-209ENST00000529963 RFPL3O75679 317 aa6.55□□□□□ -1.36
AMBRA1-209ENST00000529963 CKMP06732 381 aa6.55□□□□□ -1.36
AMBRA1-209ENST00000529963 VIPR1P32241 457 aa6.55□□□□□ -1.36
AMBRA1-209ENST00000529963 HLFQ16534 295 aa6.55□□□□□ -1.36
AMBRA1-209ENST00000529963 KIF6Q6ZMV9 814 aa6.55□□□□□ -1.36
AMBRA1-209ENST00000529963 IRF2BP1Q8IU81 584 aa6.55□□□□□ -1.36
AMBRA1-209ENST00000529963 CISD2Q8N5K1 135 aaKnown RBP6.55□□□□□ -1.36
AMBRA1-209ENST00000529963 IGSF22Q8N9C0 903 aa6.55□□□□□ -1.36
AMBRA1-209ENST00000529963 MCOLN1Q9GZU1 580 aa6.55□□□□□ -1.36
AMBRA1-209ENST00000529963 EPB41L1Q9H4G0 881 aa6.55□□□□□ -1.36
AMBRA1-209ENST00000529963 HACL1Q9UJ83 578 aa6.55□□□□□ -1.36
AMBRA1-209ENST00000529963 PASKQ96RG2 1323 aa6.54□□□□□ -1.36
AMBRA1-209ENST00000529963 ZNF541Q9H0D2 1346 aa6.54□□□□□ -1.36
AMBRA1-209ENST00000529963 LOC100996750A0A140TA64 210 aa6.54□□□□□ -1.36
AMBRA1-209ENST00000529963 RASSF10A6NK89 507 aa6.54□□□□□ -1.36
AMBRA1-209ENST00000529963 KRT15P19012 456 aa6.54□□□□□ -1.36
AMBRA1-209ENST00000529963 EPHX2P34913 555 aa6.54□□□□□ -1.36
AMBRA1-209ENST00000529963 IARSP41252 1262 aaKnown RBP6.54□□□□□ -1.36
AMBRA1-209ENST00000529963 CACNA1SQ13698 1873 aa6.54□□□□□ -1.36
AMBRA1-209ENST00000529963 STEAP3Q658P3 488 aa6.54□□□□□ -1.36
AMBRA1-209ENST00000529963 PNMA8AQ86V59 439 aaPredicted RBP6.54□□□□□ -1.36
AMBRA1-209ENST00000529963 OSTM1Q86WC4 334 aa6.54□□□□□ -1.36
AMBRA1-209ENST00000529963 RIOX2Q8IUF8 465 aa6.54□□□□□ -1.36
AMBRA1-209ENST00000529963 ANKRD13AQ8IZ07 590 aa6.54□□□□□ -1.36
AMBRA1-209ENST00000529963 SYNE4Q8N205 404 aa6.54□□□□□ -1.36
AMBRA1-209ENST00000529963 NGEFQ8N5V2 710 aa6.54□□□□□ -1.36
AMBRA1-209ENST00000529963 NETO2Q8NC67 525 aa6.54□□□□□ -1.36
AMBRA1-209ENST00000529963 JDP2Q8WYK2 163 aa6.54□□□□□ -1.36
AMBRA1-209ENST00000529963 RPGRQ92834 1020 aaKnown RBP6.54□□□□□ -1.36
AMBRA1-209ENST00000529963 FBXW5Q969U6 566 aa6.54□□□□□ -1.36
AMBRA1-209ENST00000529963 PSMD1Q99460 953 aa6.54□□□□□ -1.36
AMBRA1-209ENST00000529963 SGPP1Q9BX95 441 aa6.54□□□□□ -1.36
AMBRA1-209ENST00000529963 KRTAP4-6Q9BYQ5 205 aa6.54□□□□□ -1.36
AMBRA1-209ENST00000529963 ZNF552Q9H707 407 aaPredicted RBP6.54□□□□□ -1.36
AMBRA1-209ENST00000529963 DCP1AQ9NPI6 582 aaPredicted RBP6.54□□□□□ -1.36
AMBRA1-209ENST00000529963 PALD1Q9ULE6 856 aa6.54□□□□□ -1.36
AMBRA1-209ENST00000529963 MAP3K15Q6ZN16 1313 aa6.53□□□□□ -1.36
AMBRA1-209ENST00000529963 SCN4AP35499 1836 aa6.53□□□□□ -1.36
AMBRA1-209ENST00000529963 MYOCOSA0A1B0GUC4 107 aa6.53□□□□□ -1.36
AMBRA1-209ENST00000529963 TCRBV5S4A2TA0A5A2 114 aa6.53□□□□□ -1.36
AMBRA1-209ENST00000529963 FZD9O00144 591 aa6.53□□□□□ -1.36
AMBRA1-209ENST00000529963 SLC27A2O14975 620 aa6.53□□□□□ -1.36
AMBRA1-209ENST00000529963 CLSTN1O94985 981 aa6.53□□□□□ -1.36
AMBRA1-209ENST00000529963 LTFP02788 710 aa6.53□□□□□ -1.36
AMBRA1-209ENST00000529963 JMJD7P0C870 316 aa6.53□□□□□ -1.36
AMBRA1-209ENST00000529963 PDE6AP16499 860 aa6.53□□□□□ -1.36
AMBRA1-209ENST00000529963 IGFALSP35858 605 aa6.53□□□□□ -1.36
AMBRA1-209ENST00000529963 NCKAP1LP55160 1127 aa6.53□□□□□ -1.36
AMBRA1-209ENST00000529963 SRSF3P84103 164 aaKnown RBP6.53□□□□□ -1.36
AMBRA1-209ENST00000529963 ZNF200P98182 395 aaPredicted RBP6.53□□□□□ -1.36
AMBRA1-209ENST00000529963 CRY2Q49AN0 593 aa6.53□□□□□ -1.36
AMBRA1-209ENST00000529963 OLFM4Q6UX06 510 aa6.53□□□□□ -1.36
AMBRA1-209ENST00000529963 OTOP3Q7RTS5 596 aa6.53□□□□□ -1.36
AMBRA1-209ENST00000529963 MILR1Q7Z6M3 343 aa6.53□□□□□ -1.36
AMBRA1-209ENST00000529963 LRRTM3Q86VH5 581 aa6.53□□□□□ -1.36
AMBRA1-209ENST00000529963 DCP2Q8IU60 420 aaKnown RBP6.53□□□□□ -1.36
AMBRA1-209ENST00000529963 GPC2Q8N158 579 aa6.53□□□□□ -1.36
AMBRA1-209ENST00000529963 MFSD3Q96ES6 412 aa6.53□□□□□ -1.36
AMBRA1-209ENST00000529963 TARS2Q9BW92 718 aaKnown RBP6.53□□□□□ -1.36
AMBRA1-209ENST00000529963 SLKQ9H2G2 1235 aaPredicted RBP6.53□□□□□ -1.36
AMBRA1-209ENST00000529963 PNNQ9H307 717 aaKnown RBP6.53□□□□□ -1.36
AMBRA1-209ENST00000529963 EPB41L4BQ9H329 900 aa6.53□□□□□ -1.36
AMBRA1-209ENST00000529963 MIS18AQ9NYP9 233 aa6.53□□□□□ -1.36
AMBRA1-209ENST00000529963 ABCC12Q96J65 1359 aa6.53□□□□□ -1.36
AMBRA1-209ENST00000529963 IBTKQ9P2D0 1353 aaPredicted RBP6.53□□□□□ -1.36
AMBRA1-209ENST00000529963 TNRC18O15417 2968 aaPredicted RBP6.52□□□□□ -1.36
AMBRA1-209ENST00000529963 RNF123Q5XPI4 1314 aa6.52□□□□□ -1.36
AMBRA1-209ENST00000529963 MAPK8IP3Q9UPT6 1336 aa6.52□□□□□ -1.36
AMBRA1-209ENST00000529963 LAMB4A4D0S4 1761 aa6.52□□□□□ -1.37
AMBRA1-209ENST00000529963 KPNA6O60684 536 aa6.52□□□□□ -1.37
AMBRA1-209ENST00000529963 ASLP04424 464 aa6.52□□□□□ -1.37
AMBRA1-209ENST00000529963 MYCLP1P12525 358 aaPredicted RBP6.52□□□□□ -1.37
AMBRA1-209ENST00000529963 MYL6BP14649 208 aa6.52□□□□□ -1.37
AMBRA1-209ENST00000529963 NAT1P18440 290 aa6.52□□□□□ -1.37
AMBRA1-209ENST00000529963 MAPKAPK2P49137 400 aa6.52□□□□□ -1.37
AMBRA1-209ENST00000529963 NEK4P51957 841 aa6.52□□□□□ -1.37
AMBRA1-209ENST00000529963 JAM2P57087 298 aa6.52□□□□□ -1.37
AMBRA1-209ENST00000529963 EIF4A1P60842 406 aaKnown RBP6.52□□□□□ -1.37
AMBRA1-209ENST00000529963 NR1I3Q14994 352 aa6.52□□□□□ -1.37
AMBRA1-209ENST00000529963 TM4SF20Q53R12 229 aa6.52□□□□□ -1.37
AMBRA1-209ENST00000529963 PIK3R6Q5UE93 754 aa6.52□□□□□ -1.37
AMBRA1-209ENST00000529963 ZC3H14Q6PJT7 736 aaKnown RBP6.52□□□□□ -1.37
AMBRA1-209ENST00000529963 PEX11GQ96HA9 241 aa6.52□□□□□ -1.37
AMBRA1-209ENST00000529963 RBM17Q96I25 401 aaKnown RBP6.52□□□□□ -1.37
AMBRA1-209ENST00000529963 CD244Q9BZW8 370 aa6.52□□□□□ -1.37
AMBRA1-209ENST00000529963 AP5M1Q9H0R1 490 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms