RNA–Protein interactions for RNA: ENST00000528396.5

CAPN1-215, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-215ENST00000528396 RNF169Q8NCN4 708 aa14.87□□□□□ -0.03
CAPN1-215ENST00000528396 POLR3FQ9H1D9 316 aaPredicted RBP14.87□□□□□ -0.03
CAPN1-215ENST00000528396 BHMT2Q9H2M3 363 aa14.87□□□□□ -0.03
CAPN1-215ENST00000528396 COL6A3P12111 3177 aa14.87□□□□□ -0.03
CAPN1-215ENST00000528396 PTPRSQ13332 1948 aa14.86□□□□□ -0.03
CAPN1-215ENST00000528396 ERLIN2O94905 339 aa14.86□□□□□ -0.03
CAPN1-215ENST00000528396 CDC25AP30304 524 aa14.86□□□□□ -0.03
CAPN1-215ENST00000528396 UBA7P41226 1012 aa14.86□□□□□ -0.03
CAPN1-215ENST00000528396 CEBPZQ03701 1054 aaKnown RBP14.86□□□□□ -0.03
CAPN1-215ENST00000528396 RESTQ13127 1097 aa14.86□□□□□ -0.03
CAPN1-215ENST00000528396 IL17AQ16552 155 aa14.86□□□□□ -0.03
CAPN1-215ENST00000528396 TWF2Q6IBS0 349 aaKnown RBP14.86□□□□□ -0.03
CAPN1-215ENST00000528396 SRGAP1Q7Z6B7 1085 aa14.86□□□□□ -0.03
CAPN1-215ENST00000528396 RTN4RL1Q86UN2 441 aaPredicted RBP14.86□□□□□ -0.03
CAPN1-215ENST00000528396 AK8Q96MA6 479 aa14.86□□□□□ -0.03
CAPN1-215ENST00000528396 SAMD11Q96NU1 681 aa14.86□□□□□ -0.03
CAPN1-215ENST00000528396 NT5C3AQ9H0P0 336 aa14.86□□□□□ -0.03
CAPN1-215ENST00000528396 XPNPEP1Q9NQW7 623 aa14.86□□□□□ -0.03
CAPN1-215ENST00000528396 CHST12Q9NRB3 414 aa14.86□□□□□ -0.03
CAPN1-215ENST00000528396 MTMR6Q9Y217 621 aa14.86□□□□□ -0.03
CAPN1-215ENST00000528396 PIN4Q9Y237 131 aaKnown RBP14.86□□□□□ -0.03
CAPN1-215ENST00000528396 ADGRA3Q8IWK6 1321 aa14.86□□□□□ -0.03
CAPN1-215ENST00000528396 ARID2Q68CP9 1835 aa14.85□□□□□ -0.03
CAPN1-215ENST00000528396 LRRIQ4A6NIV6 560 aa14.85□□□□□ -0.03
CAPN1-215ENST00000528396 HOXA2O43364 376 aa14.85□□□□□ -0.03
CAPN1-215ENST00000528396 MGEA5O60502 916 aa14.85□□□□□ -0.03
CAPN1-215ENST00000528396 SSBP05455 408 aaKnown RBP eCLIP14.85□□□□□ -0.03
CAPN1-215ENST00000528396 PAN2Q504Q3 1202 aaKnown RBP14.85□□□□□ -0.03
CAPN1-215ENST00000528396 SPOUT1Q5T280 376 aaKnown RBP14.85□□□□□ -0.03
CAPN1-215ENST00000528396 ABI1Q8IZP0 508 aa14.85□□□□□ -0.03
CAPN1-215ENST00000528396 MICALL1Q8N3F8 863 aa14.85□□□□□ -0.03
CAPN1-215ENST00000528396 FBXO22Q8NEZ5 403 aa14.85□□□□□ -0.03
CAPN1-215ENST00000528396 MAFAQ8NHW3 353 aaPredicted RBP14.85□□□□□ -0.03
CAPN1-215ENST00000528396 SP7Q8TDD2 431 aaPredicted RBP14.85□□□□□ -0.03
CAPN1-215ENST00000528396 CALML4Q96GE6 196 aa14.85□□□□□ -0.03
CAPN1-215ENST00000528396 TMEM161AQ9NX61 479 aa14.85□□□□□ -0.03
CAPN1-215ENST00000528396 RWDD3Q9Y3V2 267 aa14.85□□□□□ -0.03
CAPN1-215ENST00000528396 TTC3P53804 2025 aa14.84□□□□□ -0.03
CAPN1-215ENST00000528396 C9IYK1 514 aa14.84□□□□□ -0.03
CAPN1-215ENST00000528396 INO80B-WBP1J3KQ70 363 aa14.84□□□□□ -0.03
CAPN1-215ENST00000528396 DGKIO75912 1065 aa14.84□□□□□ -0.03
CAPN1-215ENST00000528396 ARHGEF15O94989 841 aa14.84□□□□□ -0.03
CAPN1-215ENST00000528396 SKIP12755 728 aa14.84□□□□□ -0.03
CAPN1-215ENST00000528396 CYP11B2P19099 503 aa14.84□□□□□ -0.03
CAPN1-215ENST00000528396 CTNNB1P35222 781 aa14.84□□□□□ -0.03
CAPN1-215ENST00000528396 ERVK-21P61565 698 aa14.84□□□□□ -0.03
CAPN1-215ENST00000528396 BECN1Q14457 450 aa14.84□□□□□ -0.03
CAPN1-215ENST00000528396 PCBP1Q15365 356 aaKnown RBP eCLIP14.84□□□□□ -0.03
CAPN1-215ENST00000528396 FOXD4L5Q5VV16 416 aaPredicted RBP14.84□□□□□ -0.03
CAPN1-215ENST00000528396 CABP7Q86V35 215 aa14.84□□□□□ -0.03
CAPN1-215ENST00000528396 ZBTB8OSQ8IWT0 167 aa14.84□□□□□ -0.03
CAPN1-215ENST00000528396 CMTR2Q8IYT2 770 aaKnown RBP14.84□□□□□ -0.03
CAPN1-215ENST00000528396 ASAP3Q8TDY4 903 aa14.84□□□□□ -0.03
CAPN1-215ENST00000528396 FOXD4L4Q8WXT5 416 aaPredicted RBP14.84□□□□□ -0.03
CAPN1-215ENST00000528396 PPM1EQ8WY54 764 aa14.84□□□□□ -0.03
CAPN1-215ENST00000528396 IFT74Q96LB3 600 aa14.84□□□□□ -0.03
CAPN1-215ENST00000528396 ZNF396Q96N95 335 aaPredicted RBP14.84□□□□□ -0.03
CAPN1-215ENST00000528396 C17orf80Q9BSJ5 609 aa14.84□□□□□ -0.03
CAPN1-215ENST00000528396 IFT122Q9HBG6 1241 aa14.84□□□□□ -0.03
CAPN1-215ENST00000528396 TBKBP1A7MCY6 615 aa14.83□□□□□ -0.04
CAPN1-215ENST00000528396 E9PMD0 336 aa14.83□□□□□ -0.04
CAPN1-215ENST00000528396 RFXAPO00287 272 aa14.83□□□□□ -0.04
CAPN1-215ENST00000528396 EYA4O95677 639 aa14.83□□□□□ -0.04
CAPN1-215ENST00000528396 GLRA2P23416 452 aa14.83□□□□□ -0.04
CAPN1-215ENST00000528396 ARL2P36404 184 aa14.83□□□□□ -0.04
CAPN1-215ENST00000528396 LONP1P36776 959 aaKnown RBP14.83□□□□□ -0.04
CAPN1-215ENST00000528396 TXLNAP40222 546 aa14.83□□□□□ -0.04
CAPN1-215ENST00000528396 CAPSQ13938 189 aa14.83□□□□□ -0.04
CAPN1-215ENST00000528396 DSC3Q14574 896 aa14.83□□□□□ -0.04
CAPN1-215ENST00000528396 PPP2R5AQ15172 486 aa14.83□□□□□ -0.04
CAPN1-215ENST00000528396 ECM1Q16610 540 aa14.83□□□□□ -0.04
CAPN1-215ENST00000528396 TMEM132AQ24JP5 1023 aa14.83□□□□□ -0.04
CAPN1-215ENST00000528396 FAM173BQ6P4H8 233 aa14.83□□□□□ -0.04
CAPN1-215ENST00000528396 TMEM192Q8IY95 271 aa14.83□□□□□ -0.04
CAPN1-215ENST00000528396 KCTD17Q8N5Z5 321 aa14.83□□□□□ -0.04
CAPN1-215ENST00000528396 GDPD5Q8WTR4 605 aa14.83□□□□□ -0.04
CAPN1-215ENST00000528396 KIFAP3Q92845 792 aa14.83□□□□□ -0.04
CAPN1-215ENST00000528396 PLIN2Q99541 437 aa14.83□□□□□ -0.04
CAPN1-215ENST00000528396 ELAC1Q9H777 363 aaKnown RBP14.83□□□□□ -0.04
CAPN1-215ENST00000528396 GPRC5CQ9NQ84 441 aa14.83□□□□□ -0.04
CAPN1-215ENST00000528396 CLIC4Q9Y696 253 aa14.83□□□□□ -0.04
CAPN1-215ENST00000528396 SLC26A4O43511 780 aa14.82□□□□□ -0.04
CAPN1-215ENST00000528396 MARCKSP29966 332 aaPredicted RBP14.82□□□□□ -0.04
CAPN1-215ENST00000528396 RAB27AP51159 221 aa14.82□□□□□ -0.04
CAPN1-215ENST00000528396 PTENP60484 403 aa14.82□□□□□ -0.04
CAPN1-215ENST00000528396 FAM189BP81408 668 aa14.82□□□□□ -0.04
CAPN1-215ENST00000528396 POU5F1BQ06416 359 aa14.82□□□□□ -0.04
CAPN1-215ENST00000528396 STK38Q15208 465 aa14.82□□□□□ -0.04
CAPN1-215ENST00000528396 EPC2Q52LR7 807 aa14.82□□□□□ -0.04
CAPN1-215ENST00000528396 SPRED2Q7Z698 418 aa14.82□□□□□ -0.04
CAPN1-215ENST00000528396 ECHDC2Q86YB7 292 aa14.82□□□□□ -0.04
CAPN1-215ENST00000528396 DEPTORQ8TB45 409 aa14.82□□□□□ -0.04
CAPN1-215ENST00000528396 C2orf40Q9H1Z8 148 aa14.82□□□□□ -0.04
CAPN1-215ENST00000528396 AGPAT5Q9NUQ2 364 aa14.82□□□□□ -0.04
CAPN1-215ENST00000528396 A0A0U1RQF3 1178 aa14.81□□□□□ -0.04
CAPN1-215ENST00000528396 EPOPA6NHQ4 379 aa14.81□□□□□ -0.04
CAPN1-215ENST00000528396 EOMESO95936 686 aa14.81□□□□□ -0.04
CAPN1-215ENST00000528396 ZSCAN22P10073 491 aaPredicted RBP14.81□□□□□ -0.04
CAPN1-215ENST00000528396 FGFR1P11362 822 aa14.81□□□□□ -0.04
CAPN1-215ENST00000528396 LIG1P18858 919 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms