RNA–Protein interactions for RNA: ENST00000527046.5

NEDD8-205, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-205ENST00000527046 COL4A3BPQ9Y5P4 624 aa11.95□□□□□ -0.5
NEDD8-205ENST00000527046 TRPV2Q9Y5S1 764 aa11.95□□□□□ -0.5
NEDD8-205ENST00000527046 TTLL13PA6NNM8 815 aa11.94□□□□□ -0.5
NEDD8-205ENST00000527046 ASAP2O43150 1006 aa11.94□□□□□ -0.5
NEDD8-205ENST00000527046 GAS2O43903 313 aaKnown RBP11.94□□□□□ -0.5
NEDD8-205ENST00000527046 SSBP05455 408 aaKnown RBP eCLIP11.94□□□□□ -0.5
NEDD8-205ENST00000527046 PRR29P0C7W0 189 aa11.94□□□□□ -0.5
NEDD8-205ENST00000527046 ACRP10323 421 aa11.94□□□□□ -0.5
NEDD8-205ENST00000527046 DARSP14868 501 aaKnown RBP11.94□□□□□ -0.5
NEDD8-205ENST00000527046 TMOD1P28289 359 aa11.94□□□□□ -0.5
NEDD8-205ENST00000527046 TXLNAP40222 546 aa11.94□□□□□ -0.5
NEDD8-205ENST00000527046 MAGEA10P43363 369 aaPredicted RBP11.94□□□□□ -0.5
NEDD8-205ENST00000527046 PTENP60484 403 aa11.94□□□□□ -0.5
NEDD8-205ENST00000527046 CUL4BQ13620 913 aa11.94□□□□□ -0.5
NEDD8-205ENST00000527046 AMHR2Q16671 573 aa11.94□□□□□ -0.5
NEDD8-205ENST00000527046 PLEKHG4Q58EX7 1191 aa11.94□□□□□ -0.5
NEDD8-205ENST00000527046 FAM102BQ5T8I3 360 aa11.94□□□□□ -0.5
NEDD8-205ENST00000527046 RNF149Q8NC42 400 aa11.94□□□□□ -0.5
NEDD8-205ENST00000527046 GPT2Q8TD30 523 aa11.94□□□□□ -0.5
NEDD8-205ENST00000527046 TCP11Q8WWU5 503 aa11.94□□□□□ -0.5
NEDD8-205ENST00000527046 PSPC1Q8WXF1 523 aaKnown RBP11.94□□□□□ -0.5
NEDD8-205ENST00000527046 KCNN1Q92952 543 aa11.94□□□□□ -0.5
NEDD8-205ENST00000527046 OSMRQ99650 979 aa11.94□□□□□ -0.5
NEDD8-205ENST00000527046 JPH2Q9BR39 696 aaPredicted RBP11.94□□□□□ -0.5
NEDD8-205ENST00000527046 BLZF1Q9H2G9 400 aa11.94□□□□□ -0.5
NEDD8-205ENST00000527046 TNMDQ9H2S6 317 aa11.94□□□□□ -0.5
NEDD8-205ENST00000527046 AKT3Q9Y243 479 aa11.94□□□□□ -0.5
NEDD8-205ENST00000527046 SQORQ9Y6N5 450 aa11.94□□□□□ -0.5
NEDD8-205ENST00000527046 MYH11P35749 1972 aa11.94□□□□□ -0.5
NEDD8-205ENST00000527046 SRGAP2CP0DJJ0 459 aa11.93□□□□□ -0.5
NEDD8-205ENST00000527046 FGFR4P22455 802 aa11.93□□□□□ -0.5
NEDD8-205ENST00000527046 EIF4BP23588 611 aaKnown RBP11.93□□□□□ -0.5
NEDD8-205ENST00000527046 HOXA11P31270 313 aaPredicted RBP11.93□□□□□ -0.5
NEDD8-205ENST00000527046 AFMP43652 599 aa11.93□□□□□ -0.5
NEDD8-205ENST00000527046 NPTX2P47972 431 aa11.93□□□□□ -0.5
NEDD8-205ENST00000527046 DNM2P50570 870 aa11.93□□□□□ -0.5
NEDD8-205ENST00000527046 UBE2HP62256 183 aa11.93□□□□□ -0.5
NEDD8-205ENST00000527046 FAM160A1Q05DH4 1040 aa11.93□□□□□ -0.5
NEDD8-205ENST00000527046 DSC3Q14574 896 aa11.93□□□□□ -0.5
NEDD8-205ENST00000527046 MXD4Q14582 209 aaPredicted RBP11.93□□□□□ -0.5
NEDD8-205ENST00000527046 TMEM240Q5SV17 173 aa11.93□□□□□ -0.5
NEDD8-205ENST00000527046 CDCA2Q69YH5 1023 aaPredicted RBP11.93□□□□□ -0.5
NEDD8-205ENST00000527046 RSPH3Q86UC2 560 aa11.93□□□□□ -0.5
NEDD8-205ENST00000527046 ZNF410Q86VK4 478 aa11.93□□□□□ -0.5
NEDD8-205ENST00000527046 FAM228AQ86W67 206 aa11.93□□□□□ -0.5
NEDD8-205ENST00000527046 CRIPAKQ8N1N5 446 aa11.93□□□□□ -0.5
NEDD8-205ENST00000527046 GLIS3Q8NEA6 775 aa11.93□□□□□ -0.5
NEDD8-205ENST00000527046 DBF4BQ8NFT6 615 aa11.93□□□□□ -0.5
NEDD8-205ENST00000527046 SPIRE2Q8WWL2 714 aa11.93□□□□□ -0.5
NEDD8-205ENST00000527046 LINC01599Q8WXQ3 324 aa11.93□□□□□ -0.5
NEDD8-205ENST00000527046 KIFAP3Q92845 792 aa11.93□□□□□ -0.5
NEDD8-205ENST00000527046 TIGD1Q96MW7 591 aa11.93□□□□□ -0.5
NEDD8-205ENST00000527046 KIFC3Q9BVG8 833 aa11.93□□□□□ -0.5
NEDD8-205ENST00000527046 TIPINQ9BVW5 301 aa11.93□□□□□ -0.5
NEDD8-205ENST00000527046 NFKBIZQ9BYH8 718 aa11.93□□□□□ -0.5
NEDD8-205ENST00000527046 FGFBP2Q9BYJ0 223 aa11.93□□□□□ -0.5
NEDD8-205ENST00000527046 CCDC113Q9H0I3 377 aa11.93□□□□□ -0.5
NEDD8-205ENST00000527046 FZD8Q9H461 694 aa11.93□□□□□ -0.5
NEDD8-205ENST00000527046 ERVK-5Q9HDB9 667 aa11.93□□□□□ -0.5
NEDD8-205ENST00000527046 USP25Q9UHP3 1055 aa11.93□□□□□ -0.5
NEDD8-205ENST00000527046 ODF2LQ9ULJ1 636 aa11.93□□□□□ -0.5
NEDD8-205ENST00000527046 NR2E3Q9Y5X4 410 aa11.93□□□□□ -0.5
NEDD8-205ENST00000527046 PTPRSQ13332 1948 aa11.92□□□□□ -0.5
NEDD8-205ENST00000527046 MGEA5O60502 916 aa11.92□□□□□ -0.5
NEDD8-205ENST00000527046 PPP1R37O75864 691 aa11.92□□□□□ -0.5
NEDD8-205ENST00000527046 RPLP2P05387 115 aaKnown RBP11.92□□□□□ -0.5
NEDD8-205ENST00000527046 GHRP10912 638 aa11.92□□□□□ -0.5
NEDD8-205ENST00000527046 PLS3P13797 630 aa11.92□□□□□ -0.5
NEDD8-205ENST00000527046 CD52P31358 61 aa11.92□□□□□ -0.5
NEDD8-205ENST00000527046 PEX3P56589 373 aa11.92□□□□□ -0.5
NEDD8-205ENST00000527046 CDC42EP1Q00587 391 aa11.92□□□□□ -0.5
NEDD8-205ENST00000527046 MBTD1Q05BQ5 628 aa11.92□□□□□ -0.5
NEDD8-205ENST00000527046 DPYDQ12882 1025 aa11.92□□□□□ -0.5
NEDD8-205ENST00000527046 RASIP1Q5U651 963 aa11.92□□□□□ -0.5
NEDD8-205ENST00000527046 ZNF365Q70YC5 407 aa11.92□□□□□ -0.5
NEDD8-205ENST00000527046 DEFB128Q7Z7B8 93 aa11.92□□□□□ -0.5
NEDD8-205ENST00000527046 CCDC155Q8N6L0 562 aa11.92□□□□□ -0.5
NEDD8-205ENST00000527046 TMEM161BQ8NDZ6 487 aa11.92□□□□□ -0.5
NEDD8-205ENST00000527046 RASSF8Q8NHQ8 419 aa11.92□□□□□ -0.5
NEDD8-205ENST00000527046 SPATA20Q8TB22 786 aa11.92□□□□□ -0.5
NEDD8-205ENST00000527046 HPS3Q969F9 1004 aa11.92□□□□□ -0.5
NEDD8-205ENST00000527046 NLRP4Q96MN2 994 aa11.92□□□□□ -0.5
NEDD8-205ENST00000527046 MAP7D2Q96T17 732 aa11.92□□□□□ -0.5
NEDD8-205ENST00000527046 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.92□□□□□ -0.55e-9■□□□□ 8.6
NEDD8-205ENST00000527046 C17orf75Q9HAS0 396 aa11.92□□□□□ -0.5
NEDD8-205ENST00000527046 IL23AQ9NPF7 189 aa11.92□□□□□ -0.5
NEDD8-205ENST00000527046 ARHGAP28Q9P2N2 729 aa11.92□□□□□ -0.5
NEDD8-205ENST00000527046 PADI3Q9ULW8 664 aa11.92□□□□□ -0.5
NEDD8-205ENST00000527046 ST3GAL5Q9UNP4 418 aa11.92□□□□□ -0.5
NEDD8-205ENST00000527046 USP20Q9Y2K6 914 aa11.92□□□□□ -0.5
NEDD8-205ENST00000527046 PDE4DIPQ5VU43 2346 aa11.91□□□□□ -0.5
NEDD8-205ENST00000527046 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.91□□□□□ -0.5
NEDD8-205ENST00000527046 NMT1P30419 496 aaKnown RBP11.91□□□□□ -0.5
NEDD8-205ENST00000527046 MCM4P33991 863 aa11.91□□□□□ -0.5
NEDD8-205ENST00000527046 RFC2P35250 354 aa11.91□□□□□ -0.5
NEDD8-205ENST00000527046 HOXD13P35453 343 aa11.91□□□□□ -0.5
NEDD8-205ENST00000527046 NAMPTP43490 491 aa11.91□□□□□ -0.5
NEDD8-205ENST00000527046 SARSP49591 514 aaKnown RBP11.91□□□□□ -0.5
NEDD8-205ENST00000527046 NCKAP1LP55160 1127 aa11.91□□□□□ -0.5
NEDD8-205ENST00000527046 CSPP1Q1MSJ5 1256 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms