RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 MRPS6P82932 125 aaKnown RBP12.34□□□□□ -0.43
NEDD8-204ENST00000526430 SEMA3FQ13275 785 aa12.34□□□□□ -0.43
NEDD8-204ENST00000526430 NEDD9Q14511 834 aa12.34□□□□□ -0.43
NEDD8-204ENST00000526430 ACAP1Q15027 740 aa12.34□□□□□ -0.43
NEDD8-204ENST00000526430 SPOUT1Q5T280 376 aaKnown RBP12.34□□□□□ -0.43
NEDD8-204ENST00000526430 HSCBQ8IWL3 235 aa12.34□□□□□ -0.43
NEDD8-204ENST00000526430 CCDC148Q8NFR7 591 aa12.34□□□□□ -0.43
NEDD8-204ENST00000526430 CCDC12Q8WUD4 166 aaPredicted RBP12.34□□□□□ -0.43
NEDD8-204ENST00000526430 RTKNQ9BST9 563 aa12.34□□□□□ -0.43
NEDD8-204ENST00000526430 BCAS3Q9H6U6 928 aa12.34□□□□□ -0.43
NEDD8-204ENST00000526430 WNT16Q9UBV4 365 aa12.34□□□□□ -0.43
NEDD8-204ENST00000526430 TUBE1Q9UJT0 475 aa12.34□□□□□ -0.43
NEDD8-204ENST00000526430 FBXL21Q9UKT6 434 aa12.34□□□□□ -0.43
NEDD8-204ENST00000526430 CDV3Q9UKY7 258 aaKnown RBP12.34□□□□□ -0.43
NEDD8-204ENST00000526430 SMC3Q9UQE7 1217 aa12.34□□□□□ -0.43
NEDD8-204ENST00000526430 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.34□□□□□ -0.43
NEDD8-204ENST00000526430 UBIAD1Q9Y5Z9 338 aa12.34□□□□□ -0.43
NEDD8-204ENST00000526430 IGSF9BQ9UPX0 1349 aa12.34□□□□□ -0.43
NEDD8-204ENST00000526430 ZFYVE26Q68DK2 2539 aa12.34□□□□□ -0.43
NEDD8-204ENST00000526430 FOSP01100 380 aaPredicted RBP12.33□□□□□ -0.44
NEDD8-204ENST00000526430 SP9P0CG40 484 aa12.33□□□□□ -0.44
NEDD8-204ENST00000526430 SYT1P21579 422 aa12.33□□□□□ -0.44
NEDD8-204ENST00000526430 U2AF2P26368 475 aaKnown RBP eCLIP12.33□□□□□ -0.441e-6■□□□□ 10.9
NEDD8-204ENST00000526430 CCND2P30279 289 aa12.33□□□□□ -0.44
NEDD8-204ENST00000526430 DDIT3P35638 169 aa12.33□□□□□ -0.44
NEDD8-204ENST00000526430 LMNB2Q03252 620 aa12.33□□□□□ -0.44
NEDD8-204ENST00000526430 TBC1D8BQ0IIM8 1120 aa12.33□□□□□ -0.44
NEDD8-204ENST00000526430 AP3B2Q13367 1082 aa12.33□□□□□ -0.44
NEDD8-204ENST00000526430 ATAT1Q5SQI0 421 aa12.33□□□□□ -0.44
NEDD8-204ENST00000526430 IER5Q5VY09 327 aa12.33□□□□□ -0.44
NEDD8-204ENST00000526430 PCNX4Q63HM2 1172 aa12.33□□□□□ -0.44
NEDD8-204ENST00000526430 DIS3L2Q8IYB7 885 aaKnown RBP12.33□□□□□ -0.44
NEDD8-204ENST00000526430 REXO1Q8N1G1 1221 aaKnown RBP12.33□□□□□ -0.44
NEDD8-204ENST00000526430 DNAJB3Q8WWF6 145 aa12.33□□□□□ -0.44
NEDD8-204ENST00000526430 ACSF2Q96CM8 615 aaPredicted RBP12.33□□□□□ -0.44
NEDD8-204ENST00000526430 C8orf76Q96K31 380 aa12.33□□□□□ -0.44
NEDD8-204ENST00000526430 GLT8D2Q9H1C3 349 aa12.33□□□□□ -0.44
NEDD8-204ENST00000526430 DZANK1Q9NVP4 752 aa12.33□□□□□ -0.44
NEDD8-204ENST00000526430 DBR1Q9UK59 544 aaKnown RBP12.33□□□□□ -0.44
NEDD8-204ENST00000526430 PADI3Q9ULW8 664 aa12.33□□□□□ -0.44
NEDD8-204ENST00000526430 RBM19Q9Y4C8 960 aaKnown RBP12.33□□□□□ -0.44
NEDD8-204ENST00000526430 CEP295Q9C0D2 2601 aa12.33□□□□□ -0.44
NEDD8-204ENST00000526430 MYH15Q9Y2K3 1946 aa12.33□□□□□ -0.44
NEDD8-204ENST00000526430 ASPMQ8IZT6 3477 aa12.32□□□□□ -0.44
NEDD8-204ENST00000526430 IGLV3-22A0A075B6J6 115 aa12.32□□□□□ -0.44
NEDD8-204ENST00000526430 FAM86B1E9PN63 330 aa12.32□□□□□ -0.44
NEDD8-204ENST00000526430 KINO60870 393 aaKnown RBP12.32□□□□□ -0.44
NEDD8-204ENST00000526430 STAM2O75886 525 aa12.32□□□□□ -0.44
NEDD8-204ENST00000526430 FAM86B2P0C5J1 330 aa12.32□□□□□ -0.44
NEDD8-204ENST00000526430 CIITAP33076 1130 aa12.32□□□□□ -0.44
NEDD8-204ENST00000526430 PPM1AP35813 382 aa12.32□□□□□ -0.44
NEDD8-204ENST00000526430 PAK2Q13177 524 aa12.32□□□□□ -0.44
NEDD8-204ENST00000526430 MAPK8IP2Q13387 824 aaPredicted RBP12.32□□□□□ -0.44
NEDD8-204ENST00000526430 GNPTABQ3T906 1256 aa12.32□□□□□ -0.44
NEDD8-204ENST00000526430 LARP1BQ659C4 914 aaKnown RBP12.32□□□□□ -0.44
NEDD8-204ENST00000526430 XRRA1Q6P2D8 792 aa12.32□□□□□ -0.44
NEDD8-204ENST00000526430 FAM184AQ8NB25 1140 aa12.32□□□□□ -0.44
NEDD8-204ENST00000526430 SPRYD3Q8NCJ5 442 aa12.32□□□□□ -0.44
NEDD8-204ENST00000526430 RIN2Q8WYP3 895 aaPredicted RBP12.32□□□□□ -0.44
NEDD8-204ENST00000526430 LENG9Q96B70 501 aa12.32□□□□□ -0.44
NEDD8-204ENST00000526430 MBOAT7Q96N66 472 aa12.32□□□□□ -0.44
NEDD8-204ENST00000526430 INPP4AQ96PE3 977 aaPredicted RBP12.32□□□□□ -0.44
NEDD8-204ENST00000526430 CWH43Q9H720 699 aa12.32□□□□□ -0.44
NEDD8-204ENST00000526430 RTEL1Q9NZ71 1219 aa12.32□□□□□ -0.44
NEDD8-204ENST00000526430 DLGAP2Q9P1A6 1054 aa12.32□□□□□ -0.44
NEDD8-204ENST00000526430 MTMR6Q9Y217 621 aa12.32□□□□□ -0.44
NEDD8-204ENST00000526430 ZDHHC9Q9Y397 364 aa12.32□□□□□ -0.44
NEDD8-204ENST00000526430 TELO2Q9Y4R8 837 aa12.32□□□□□ -0.44
NEDD8-204ENST00000526430 PCDHB7Q9Y5E2 793 aa12.32□□□□□ -0.44
NEDD8-204ENST00000526430 KDM3AQ9Y4C1 1321 aa12.32□□□□□ -0.44
NEDD8-204ENST00000526430 MTCL1Q9Y4B5 1905 aaKnown RBP12.31□□□□□ -0.44
NEDD8-204ENST00000526430 CYP3A7-CYP3A51PA0A087WV96 503 aa12.31□□□□□ -0.44
NEDD8-204ENST00000526430 SPDYE3A6NKU9 549 aa12.31□□□□□ -0.44
NEDD8-204ENST00000526430 TBKBP1A7MCY6 615 aa12.31□□□□□ -0.44
NEDD8-204ENST00000526430 MEIS1O00470 390 aa12.31□□□□□ -0.44
NEDD8-204ENST00000526430 SPTLC1O15269 473 aa12.31□□□□□ -0.44
NEDD8-204ENST00000526430 ATP9AO75110 1047 aa12.31□□□□□ -0.44
NEDD8-204ENST00000526430 CYP3A7P24462 503 aa12.31□□□□□ -0.44
NEDD8-204ENST00000526430 KRT2P35908 639 aa12.31□□□□□ -0.44
NEDD8-204ENST00000526430 TOB1P50616 345 aaPredicted RBP12.31□□□□□ -0.44
NEDD8-204ENST00000526430 PPFIA1Q13136 1202 aa12.31□□□□□ -0.44
NEDD8-204ENST00000526430 PKP1Q13835 747 aa12.31□□□□□ -0.44
NEDD8-204ENST00000526430 SMC1AQ14683 1233 aaKnown RBP12.31□□□□□ -0.44
NEDD8-204ENST00000526430 GRIK4Q16099 956 aa12.31□□□□□ -0.44
NEDD8-204ENST00000526430 INF2Q27J81 1249 aa12.31□□□□□ -0.44
NEDD8-204ENST00000526430 VARS2Q5ST30 1063 aaKnown RBP12.31□□□□□ -0.44
NEDD8-204ENST00000526430 MARCH8Q5T0T0 291 aa12.31□□□□□ -0.44
NEDD8-204ENST00000526430 CYFIP1Q7L576 1253 aa12.31□□□□□ -0.44
NEDD8-204ENST00000526430 OTOP3Q7RTS5 596 aa12.31□□□□□ -0.44
NEDD8-204ENST00000526430 C1orf210Q8IVY1 113 aa12.31□□□□□ -0.44
NEDD8-204ENST00000526430 MRPL43Q8N983 215 aaKnown RBP12.31□□□□□ -0.44
NEDD8-204ENST00000526430 BICD2Q8TD16 824 aa12.31□□□□□ -0.44
NEDD8-204ENST00000526430 TBCKQ8TEA7 893 aa12.31□□□□□ -0.44
NEDD8-204ENST00000526430 CHAMP1Q96JM3 812 aa12.31□□□□□ -0.44
NEDD8-204ENST00000526430 FOXP1Q9H334 677 aaPredicted RBP12.31□□□□□ -0.44
NEDD8-204ENST00000526430 TMX1Q9H3N1 280 aa12.31□□□□□ -0.44
NEDD8-204ENST00000526430 KCNK12Q9HB15 430 aa12.31□□□□□ -0.44
NEDD8-204ENST00000526430 TYW1Q9NV66 732 aaKnown RBP12.31□□□□□ -0.44
NEDD8-204ENST00000526430 IGSF9Q9P2J2 1179 aa12.31□□□□□ -0.44
NEDD8-204ENST00000526430 NCDNQ9UBB6 729 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms