RNA–Protein interactions for RNA: ENST00000525079.5

TRAPPC4-205, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 768 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-205ENST00000525079 INO80BQ9C086 356 aaPredicted RBP14.32□□□□□ -0.12
TRAPPC4-205ENST00000525079 IFT122Q9HBG6 1241 aa14.32□□□□□ -0.12
TRAPPC4-205ENST00000525079 TUFT1Q9NNX1 390 aa14.32□□□□□ -0.12
TRAPPC4-205ENST00000525079 ALG13Q9NP73 1137 aaKnown RBP14.32□□□□□ -0.12
TRAPPC4-205ENST00000525079 TMEM161AQ9NX61 479 aa14.32□□□□□ -0.12
TRAPPC4-205ENST00000525079 HCSTQ9UBK5 93 aa14.32□□□□□ -0.12
TRAPPC4-205ENST00000525079 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.32□□□□□ -0.12
TRAPPC4-205ENST00000525079 FNDC1Q4ZHG4 1894 aaPredicted RBP14.31□□□□□ -0.12
TRAPPC4-205ENST00000525079 USO1O60763 962 aaKnown RBP14.31□□□□□ -0.12
TRAPPC4-205ENST00000525079 RB1P06400 928 aa14.31□□□□□ -0.12
TRAPPC4-205ENST00000525079 SFPQP23246 707 aaKnown RBP eCLIP14.31□□□□□ -0.12
TRAPPC4-205ENST00000525079 RARRES1P49788 294 aa14.31□□□□□ -0.12
TRAPPC4-205ENST00000525079 PTPROQ16827 1216 aa14.31□□□□□ -0.12
TRAPPC4-205ENST00000525079 LONRF3Q496Y0 759 aa14.31□□□□□ -0.12
TRAPPC4-205ENST00000525079 POTEGQ6S5H5 508 aa14.31□□□□□ -0.12
TRAPPC4-205ENST00000525079 FAM43BQ6ZT52 329 aaPredicted RBP14.31□□□□□ -0.12
TRAPPC4-205ENST00000525079 FERMT3Q86UX7 667 aa14.31□□□□□ -0.12
TRAPPC4-205ENST00000525079 RNF149Q8NC42 400 aa14.31□□□□□ -0.12
TRAPPC4-205ENST00000525079 ERMNQ8TAM6 284 aa14.31□□□□□ -0.12
TRAPPC4-205ENST00000525079 ASAP3Q8TDY4 903 aa14.31□□□□□ -0.12
TRAPPC4-205ENST00000525079 MRPL38Q96DV4 380 aaKnown RBP14.31□□□□□ -0.12
TRAPPC4-205ENST00000525079 POLR3CQ9BUI4 534 aaPredicted RBP14.31□□□□□ -0.12
TRAPPC4-205ENST00000525079 COL25A1Q9BXS0 654 aaPredicted RBP14.31□□□□□ -0.12
TRAPPC4-205ENST00000525079 ELAC1Q9H777 363 aaKnown RBP14.31□□□□□ -0.12
TRAPPC4-205ENST00000525079 MINDY3Q9H8M7 445 aa14.31□□□□□ -0.12
TRAPPC4-205ENST00000525079 RNF19AQ9NV58 838 aa14.31□□□□□ -0.12
TRAPPC4-205ENST00000525079 RNF216Q9NWF9 866 aaPredicted RBP14.31□□□□□ -0.12
TRAPPC4-205ENST00000525079 LRWD1Q9UFC0 647 aa14.31□□□□□ -0.12
TRAPPC4-205ENST00000525079 PIN4Q9Y237 131 aaKnown RBP14.31□□□□□ -0.12
TRAPPC4-205ENST00000525079 RWDD3Q9Y3V2 267 aa14.31□□□□□ -0.12
TRAPPC4-205ENST00000525079 C5orf67F2Z3F1 127 aa14.3□□□□□ -0.12
TRAPPC4-205ENST00000525079 ASAP2O43150 1006 aa14.3□□□□□ -0.12
TRAPPC4-205ENST00000525079 DGAT1O75907 488 aa14.3□□□□□ -0.12
TRAPPC4-205ENST00000525079 XRCC6P12956 609 aaKnown RBP eCLIP14.3□□□□□ -0.12
TRAPPC4-205ENST00000525079 CCT6AP40227 531 aaKnown RBP14.3□□□□□ -0.12
TRAPPC4-205ENST00000525079 FXR2P51116 673 aaKnown RBP eCLIP14.3□□□□□ -0.12
TRAPPC4-205ENST00000525079 IL17AQ16552 155 aa14.3□□□□□ -0.12
TRAPPC4-205ENST00000525079 ECM1Q16610 540 aa14.3□□□□□ -0.12
TRAPPC4-205ENST00000525079 TWF2Q6IBS0 349 aaKnown RBP14.3□□□□□ -0.12
TRAPPC4-205ENST00000525079 KLHL23Q8NBE8 558 aa14.3□□□□□ -0.12
TRAPPC4-205ENST00000525079 CASD1Q96PB1 797 aa14.3□□□□□ -0.12
TRAPPC4-205ENST00000525079 NACC1Q96RE7 527 aa14.3□□□□□ -0.12
TRAPPC4-205ENST00000525079 C11orf84Q9BUA3 381 aaPredicted RBP14.3□□□□□ -0.12
TRAPPC4-205ENST00000525079 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.3□□□□□ -0.12
TRAPPC4-205ENST00000525079 CHST12Q9NRB3 414 aa14.3□□□□□ -0.12
TRAPPC4-205ENST00000525079 TYW1Q9NV66 732 aaKnown RBP14.3□□□□□ -0.12
TRAPPC4-205ENST00000525079 A0A0U1RQF3 1178 aa14.29□□□□□ -0.12
TRAPPC4-205ENST00000525079 PP2D1A8MPX8 630 aa14.29□□□□□ -0.12
TRAPPC4-205ENST00000525079 GAS2O43903 313 aaKnown RBP14.29□□□□□ -0.12
TRAPPC4-205ENST00000525079 ATF7P17544 494 aaPredicted RBP14.29□□□□□ -0.12
TRAPPC4-205ENST00000525079 RPA1P27694 616 aa14.29□□□□□ -0.12
TRAPPC4-205ENST00000525079 CDC25AP30304 524 aa14.29□□□□□ -0.12
TRAPPC4-205ENST00000525079 ARL2P36404 184 aa14.29□□□□□ -0.12
TRAPPC4-205ENST00000525079 MRPS5P82675 430 aaKnown RBP14.29□□□□□ -0.12
TRAPPC4-205ENST00000525079 CUL4AQ13619 759 aa14.29□□□□□ -0.12
TRAPPC4-205ENST00000525079 LRRC55Q6ZSA7 311 aa14.29□□□□□ -0.12
TRAPPC4-205ENST00000525079 SRGAP1Q7Z6B7 1085 aa14.29□□□□□ -0.12
TRAPPC4-205ENST00000525079 ZNF598Q86UK7 904 aaKnown RBP14.29□□□□□ -0.12
TRAPPC4-205ENST00000525079 HELQQ8TDG4 1101 aa14.29□□□□□ -0.12
TRAPPC4-205ENST00000525079 ATXN2LQ8WWM7 1075 aaKnown RBP14.29□□□□□ -0.12
TRAPPC4-205ENST00000525079 LPPQ93052 612 aa14.29□□□□□ -0.12
TRAPPC4-205ENST00000525079 ASB2Q96Q27 587 aa14.29□□□□□ -0.12
TRAPPC4-205ENST00000525079 TMEM117Q9H0C3 514 aa14.29□□□□□ -0.12
TRAPPC4-205ENST00000525079 POLR3FQ9H1D9 316 aaPredicted RBP14.29□□□□□ -0.12
TRAPPC4-205ENST00000525079 POLD4Q9HCU8 107 aa14.29□□□□□ -0.12
TRAPPC4-205ENST00000525079 GPRC5CQ9NQ84 441 aa14.29□□□□□ -0.12
TRAPPC4-205ENST00000525079 FOXD4L1Q9NU39 408 aa14.29□□□□□ -0.12
TRAPPC4-205ENST00000525079 DACT1Q9NYF0 836 aa14.29□□□□□ -0.12
TRAPPC4-205ENST00000525079 PLAGL2Q9UPG8 496 aa14.29□□□□□ -0.12
TRAPPC4-205ENST00000525079 ITGB1P05556 798 aa14.28□□□□□ -0.12
TRAPPC4-205ENST00000525079 GLRA2P23416 452 aa14.28□□□□□ -0.12
TRAPPC4-205ENST00000525079 DNAJB1P25685 340 aa14.28□□□□□ -0.12
TRAPPC4-205ENST00000525079 PHKA2P46019 1235 aa14.28□□□□□ -0.12
TRAPPC4-205ENST00000525079 CAPSQ13938 189 aa14.28□□□□□ -0.12
TRAPPC4-205ENST00000525079 MXD4Q14582 209 aaPredicted RBP14.28□□□□□ -0.12
TRAPPC4-205ENST00000525079 RILPL1Q5EBL4 403 aa14.28□□□□□ -0.12
TRAPPC4-205ENST00000525079 TCEAL5Q5H9L2 206 aa14.28□□□□□ -0.12
TRAPPC4-205ENST00000525079 TJAP1Q5JTD0 557 aa14.28□□□□□ -0.12
TRAPPC4-205ENST00000525079 CLLU1OSQ5K130 101 aa14.28□□□□□ -0.12
TRAPPC4-205ENST00000525079 DTHD1Q6ZMT9 781 aa14.28□□□□□ -0.12
TRAPPC4-205ENST00000525079 ABI1Q8IZP0 508 aa14.28□□□□□ -0.12
TRAPPC4-205ENST00000525079 SPPL3Q8TCT6 385 aa14.28□□□□□ -0.12
TRAPPC4-205ENST00000525079 SNX29Q8TEQ0 813 aa14.28□□□□□ -0.12
TRAPPC4-205ENST00000525079 HLA-CQ95604 372 aa14.28□□□□□ -0.12
TRAPPC4-205ENST00000525079 PLVAPQ9BX97 442 aa14.28□□□□□ -0.12
TRAPPC4-205ENST00000525079 CWH43Q9H720 699 aa14.28□□□□□ -0.12
TRAPPC4-205ENST00000525079 AGPAT5Q9NUQ2 364 aa14.28□□□□□ -0.12
TRAPPC4-205ENST00000525079 DBR1Q9UK59 544 aaKnown RBP14.28□□□□□ -0.12
TRAPPC4-205ENST00000525079 KIAA1024Q9UPX6 916 aa14.28□□□□□ -0.12
TRAPPC4-205ENST00000525079 REV3LO60673 3130 aa14.28□□□□□ -0.12
TRAPPC4-205ENST00000525079 PRUNE2Q8WUY3 3088 aa14.27□□□□□ -0.12
TRAPPC4-205ENST00000525079 VPS37CA5D8V6 355 aaPredicted RBP14.27□□□□□ -0.13
TRAPPC4-205ENST00000525079 ARHGEF35A5YM69 484 aa14.27□□□□□ -0.13
TRAPPC4-205ENST00000525079 MEIS3P2A8K0S8 358 aa14.27□□□□□ -0.13
TRAPPC4-205ENST00000525079 INO80B-WBP1J3KQ70 363 aa14.27□□□□□ -0.13
TRAPPC4-205ENST00000525079 HOXA2O43364 376 aa14.27□□□□□ -0.13
TRAPPC4-205ENST00000525079 EOMESO95936 686 aa14.27□□□□□ -0.13
TRAPPC4-205ENST00000525079 KCNQ1P51787 676 aa14.27□□□□□ -0.13
TRAPPC4-205ENST00000525079 PTENP60484 403 aa14.27□□□□□ -0.13
TRAPPC4-205ENST00000525079 CAMK1Q14012 370 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms