RNA–Protein interactions for RNA: ENST00000524162.5

TRAPPC9-215, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-215ENST00000524162 MCPH1Q8NEM0 835 aa23.26■■□□□ 1.31
TRAPPC9-215ENST00000524162 PPP1R16BQ96T49 567 aa23.26■■□□□ 1.31
TRAPPC9-215ENST00000524162 DAXXQ9UER7 740 aaPredicted RBP23.26■■□□□ 1.31
TRAPPC9-215ENST00000524162 PCDHB7Q9Y5E2 793 aa23.26■■□□□ 1.31
TRAPPC9-215ENST00000524162 BRWD1Q9NSI6 2320 aa23.26■■□□□ 1.31
TRAPPC9-215ENST00000524162 A0A0U1RQF3 1178 aa23.25■■□□□ 1.31
TRAPPC9-215ENST00000524162 HOXA2O43364 376 aa23.25■■□□□ 1.31
TRAPPC9-215ENST00000524162 SLC26A4O43511 780 aa23.25■■□□□ 1.31
TRAPPC9-215ENST00000524162 GTPBP6O43824 516 aaPredicted RBP23.25■■□□□ 1.31
TRAPPC9-215ENST00000524162 LPXNO60711 386 aa23.25■■□□□ 1.31
TRAPPC9-215ENST00000524162 LINC00271P0C7V0 271 aa23.25■■□□□ 1.31
TRAPPC9-215ENST00000524162 ARL2P36404 184 aa23.25■■□□□ 1.31
TRAPPC9-215ENST00000524162 PIGOQ8TEQ8 1089 aa23.25■■□□□ 1.31
TRAPPC9-215ENST00000524162 TMEM143Q96AN5 459 aa23.25■■□□□ 1.31
TRAPPC9-215ENST00000524162 LRFN2Q9ULH4 789 aa23.25■■□□□ 1.31
TRAPPC9-215ENST00000524162 EPOPA6NHQ4 379 aa23.24■■□□□ 1.31
TRAPPC9-215ENST00000524162 EOMESO95936 686 aa23.24■■□□□ 1.31
TRAPPC9-215ENST00000524162 SYT1P21579 422 aa23.24■■□□□ 1.31
TRAPPC9-215ENST00000524162 TFDP1Q14186 410 aa23.24■■□□□ 1.31
TRAPPC9-215ENST00000524162 BTG3Q14201 252 aaPredicted RBP23.24■■□□□ 1.31
TRAPPC9-215ENST00000524162 EPC2Q52LR7 807 aa23.24■■□□□ 1.31
TRAPPC9-215ENST00000524162 AK8Q96MA6 479 aa23.24■■□□□ 1.31
TRAPPC9-215ENST00000524162 NLRP4Q96MN2 994 aa23.24■■□□□ 1.31
TRAPPC9-215ENST00000524162 PLVAPQ9BX97 442 aa23.24■■□□□ 1.31
TRAPPC9-215ENST00000524162 MTCH2Q9Y6C9 303 aa23.24■■□□□ 1.31
TRAPPC9-215ENST00000524162 SKIP12755 728 aa23.23■■□□□ 1.31
TRAPPC9-215ENST00000524162 CCT6AP40227 531 aaKnown RBP23.23■■□□□ 1.31
TRAPPC9-215ENST00000524162 PHKA2P46019 1235 aa23.23■■□□□ 1.31
TRAPPC9-215ENST00000524162 PTENP60484 403 aa23.23■■□□□ 1.31
TRAPPC9-215ENST00000524162 GRB10Q13322 594 aa23.23■■□□□ 1.31
TRAPPC9-215ENST00000524162 IL17AQ16552 155 aa23.23■■□□□ 1.31
TRAPPC9-215ENST00000524162 NAALADL2Q58DX5 795 aa23.23■■□□□ 1.31
TRAPPC9-215ENST00000524162 KRT79Q5XKE5 535 aa23.23■■□□□ 1.31
TRAPPC9-215ENST00000524162 POTEGQ6S5H5 508 aa23.23■■□□□ 1.31
TRAPPC9-215ENST00000524162 KSR1Q8IVT5 923 aa23.23■■□□□ 1.31
TRAPPC9-215ENST00000524162 TMEM192Q8IY95 271 aa23.23■■□□□ 1.31
TRAPPC9-215ENST00000524162 FBXO22Q8NEZ5 403 aa23.23■■□□□ 1.31
TRAPPC9-215ENST00000524162 CERS4Q9HA82 394 aa23.23■■□□□ 1.31
TRAPPC9-215ENST00000524162 KIAA1671Q9BY89 1806 aa23.23■■□□□ 1.31
TRAPPC9-215ENST00000524162 H3BNC9 293 aa23.22■■□□□ 1.31
TRAPPC9-215ENST00000524162 RBAK-RBAKDNI3L0D1 243 aa23.22■■□□□ 1.31
TRAPPC9-215ENST00000524162 BMPR1AP36894 532 aa23.22■■□□□ 1.31
TRAPPC9-215ENST00000524162 HYIQ5T013 277 aa23.22■■□□□ 1.31
TRAPPC9-215ENST00000524162 SPRED2Q7Z698 418 aa23.22■■□□□ 1.31
TRAPPC9-215ENST00000524162 P2RX5Q93086 422 aa23.22■■□□□ 1.31
TRAPPC9-215ENST00000524162 C17orf80Q9BSJ5 609 aa23.22■■□□□ 1.31
TRAPPC9-215ENST00000524162 AGPAT5Q9NUQ2 364 aa23.22■■□□□ 1.31
TRAPPC9-215ENST00000524162 NCOR1O75376 2440 aa23.22■■□□□ 1.31
TRAPPC9-215ENST00000524162 MYO7AQ13402 2215 aa23.21■■□□□ 1.31
TRAPPC9-215ENST00000524162 CUL9Q8IWT3 2517 aa23.21■■□□□ 1.31
TRAPPC9-215ENST00000524162 ZNF623O75123 536 aa23.21■■□□□ 1.31
TRAPPC9-215ENST00000524162 CYP11B2P19099 503 aa23.21■■□□□ 1.31
TRAPPC9-215ENST00000524162 IGFBP4P22692 258 aa23.21■■□□□ 1.31
TRAPPC9-215ENST00000524162 RAB27AP51159 221 aa23.21■■□□□ 1.31
TRAPPC9-215ENST00000524162 ZNF598Q86UK7 904 aaKnown RBP23.21■■□□□ 1.31
TRAPPC9-215ENST00000524162 ECHDC2Q86YB7 292 aa23.21■■□□□ 1.31
TRAPPC9-215ENST00000524162 RNF149Q8NC42 400 aa23.21■■□□□ 1.31
TRAPPC9-215ENST00000524162 SNX29Q8TEQ0 813 aa23.21■■□□□ 1.31
TRAPPC9-215ENST00000524162 ZNF668Q96K58 619 aaPredicted RBP23.21■■□□□ 1.31
TRAPPC9-215ENST00000524162 MORC2Q9Y6X9 1032 aaPredicted RBP23.21■■□□□ 1.31
TRAPPC9-215ENST00000524162 VPS37CA5D8V6 355 aaPredicted RBP23.2■■□□□ 1.3
TRAPPC9-215ENST00000524162 SRGAP2CP0DJJ0 459 aa23.2■■□□□ 1.3
TRAPPC9-215ENST00000524162 AXLP30530 894 aa23.2■■□□□ 1.3
TRAPPC9-215ENST00000524162 PADI6Q6TGC4 694 aa23.2■■□□□ 1.3
TRAPPC9-215ENST00000524162 CATSPER4Q7RTX7 472 aa23.2■■□□□ 1.3
TRAPPC9-215ENST00000524162 HSCBQ8IWL3 235 aa23.2■■□□□ 1.3
TRAPPC9-215ENST00000524162 C11orf84Q9BUA3 381 aaPredicted RBP23.2■■□□□ 1.3
TRAPPC9-215ENST00000524162 TMEM117Q9H0C3 514 aa23.2■■□□□ 1.3
TRAPPC9-215ENST00000524162 NT5C3AQ9H0P0 336 aa23.2■■□□□ 1.3
TRAPPC9-215ENST00000524162 LMAN2LQ9H0V9 348 aa23.2■■□□□ 1.3
TRAPPC9-215ENST00000524162 ZSCAN16Q9H4T2 348 aaPredicted RBP23.2■■□□□ 1.3
TRAPPC9-215ENST00000524162 KIAA1024Q9UPX6 916 aa23.2■■□□□ 1.3
TRAPPC9-215ENST00000524162 DNM3Q9UQ16 869 aa23.2■■□□□ 1.3
TRAPPC9-215ENST00000524162 ARHGEF35A5YM69 484 aa23.19■■□□□ 1.3
TRAPPC9-215ENST00000524162 RFXAPO00287 272 aa23.19■■□□□ 1.3
TRAPPC9-215ENST00000524162 GLRA2P23416 452 aa23.19■■□□□ 1.3
TRAPPC9-215ENST00000524162 ECM1Q16610 540 aa23.19■■□□□ 1.3
TRAPPC9-215ENST00000524162 CCDC51Q96ER9 411 aa23.19■■□□□ 1.3
TRAPPC9-215ENST00000524162 MMTAG2Q9BU76 263 aaKnown RBP23.19■■□□□ 1.3
TRAPPC9-215ENST00000524162 DDX19AQ9NUU7 478 aaKnown RBP23.19■■□□□ 1.3
TRAPPC9-215ENST00000524162 USO1O60763 962 aaKnown RBP23.18■■□□□ 1.3
TRAPPC9-215ENST00000524162 CSDE1O75534 798 aaKnown RBP23.18■■□□□ 1.3
TRAPPC9-215ENST00000524162 EYA4O95677 639 aa23.18■■□□□ 1.3
TRAPPC9-215ENST00000524162 CAPSQ13938 189 aa23.18■■□□□ 1.3
TRAPPC9-215ENST00000524162 PTPROQ16827 1216 aa23.18■■□□□ 1.3
TRAPPC9-215ENST00000524162 CSPP1Q1MSJ5 1256 aa23.18■■□□□ 1.3
TRAPPC9-215ENST00000524162 MINDY3Q9H8M7 445 aa23.18■■□□□ 1.3
TRAPPC9-215ENST00000524162 MTMR6Q9Y217 621 aa23.18■■□□□ 1.3
TRAPPC9-215ENST00000524162 PIN4Q9Y237 131 aaKnown RBP23.18■■□□□ 1.3
TRAPPC9-215ENST00000524162 MRPL42Q9Y6G3 142 aaKnown RBP23.18■■□□□ 1.3
TRAPPC9-215ENST00000524162 MYH15Q9Y2K3 1946 aa23.18■■□□□ 1.3
TRAPPC9-215ENST00000524162 CARNS1A5YM72 827 aa23.17■■□□□ 1.3
TRAPPC9-215ENST00000524162 STX6O43752 255 aa23.17■■□□□ 1.3
TRAPPC9-215ENST00000524162 FGFR4P22455 802 aa23.17■■□□□ 1.3
TRAPPC9-215ENST00000524162 HOXA11P31270 313 aaPredicted RBP23.17■■□□□ 1.3
TRAPPC9-215ENST00000524162 LONP1P36776 959 aaKnown RBP23.17■■□□□ 1.3
TRAPPC9-215ENST00000524162 NCBP1Q09161 790 aaKnown RBP23.17■■□□□ 1.3
TRAPPC9-215ENST00000524162 RESTQ13127 1097 aa23.17■■□□□ 1.3
TRAPPC9-215ENST00000524162 CDCA2Q69YH5 1023 aaPredicted RBP23.17■■□□□ 1.3
TRAPPC9-215ENST00000524162 ASAP3Q8TDY4 903 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms