RNA–Protein interactions for RNA: ENST00000523978.1

EFCAB13-213, Transcript of EF-hand calcium binding domain 13, humanhuman

TSL 3

Gene EFCAB13, Length 548 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB13-213ENST00000523978 NGEFQ8N5V2 710 aa6.63□□□□□ -1.35
EFCAB13-213ENST00000523978 PPHLN1Q8NEY8 458 aaKnown RBP6.63□□□□□ -1.35
EFCAB13-213ENST00000523978 RPGRQ92834 1020 aaKnown RBP6.63□□□□□ -1.35
EFCAB13-213ENST00000523978 CENPTQ96BT3 561 aa6.63□□□□□ -1.35
EFCAB13-213ENST00000523978 MPP4Q96JB8 637 aa6.63□□□□□ -1.35
EFCAB13-213ENST00000523978 SERINC2Q96SA4 455 aa6.63□□□□□ -1.35
EFCAB13-213ENST00000523978 MAP3K14Q99558 947 aa6.63□□□□□ -1.35
EFCAB13-213ENST00000523978 SELENOOQ9BVL4 669 aa6.63□□□□□ -1.35
EFCAB13-213ENST00000523978 ZFP69BQ9UJL9 534 aa6.63□□□□□ -1.35
EFCAB13-213ENST00000523978 GTF2A1LQ9UNN4 478 aa6.63□□□□□ -1.35
EFCAB13-213ENST00000523978 ASXL2Q76L83 1435 aa6.62□□□□□ -1.35
EFCAB13-213ENST00000523978 TRAV20A0A0B4J274 112 aa6.62□□□□□ -1.35
EFCAB13-213ENST00000523978 TPPPO94811 219 aa6.62□□□□□ -1.35
EFCAB13-213ENST00000523978 FBXO21O94952 628 aa6.62□□□□□ -1.35
EFCAB13-213ENST00000523978 SOD2P04179 222 aa6.62□□□□□ -1.35
EFCAB13-213ENST00000523978 CCDC175P0C221 793 aa6.62□□□□□ -1.35
EFCAB13-213ENST00000523978 PAX7P23759 505 aa6.62□□□□□ -1.35
EFCAB13-213ENST00000523978 EPHB1P54762 984 aa6.62□□□□□ -1.35
EFCAB13-213ENST00000523978 IFRD2Q12894 506 aaPredicted RBP6.62□□□□□ -1.35
EFCAB13-213ENST00000523978 SERINC3Q13530 473 aa6.62□□□□□ -1.35
EFCAB13-213ENST00000523978 SLC4A8Q2Y0W8 1093 aa6.62□□□□□ -1.35
EFCAB13-213ENST00000523978 ARMC3Q5W041 872 aa6.62□□□□□ -1.35
EFCAB13-213ENST00000523978 TSHZ3Q63HK5 1081 aa6.62□□□□□ -1.35
EFCAB13-213ENST00000523978 SLFN13Q68D06 897 aa6.62□□□□□ -1.35
EFCAB13-213ENST00000523978 ZNF585AQ6P3V2 769 aa6.62□□□□□ -1.35
EFCAB13-213ENST00000523978 Q6ZUG5 572 aa6.62□□□□□ -1.35
EFCAB13-213ENST00000523978 DAAM2Q86T65 1068 aa6.62□□□□□ -1.35
EFCAB13-213ENST00000523978 C11orf74Q86VG3 221 aa6.62□□□□□ -1.35
EFCAB13-213ENST00000523978 IQCF2Q8IXL9 164 aa6.62□□□□□ -1.35
EFCAB13-213ENST00000523978 ST13P5Q8NFI4 369 aaPredicted RBP6.62□□□□□ -1.35
EFCAB13-213ENST00000523978 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.62□□□□□ -1.35
EFCAB13-213ENST00000523978 FBXO41Q8TF61 875 aa6.62□□□□□ -1.35
EFCAB13-213ENST00000523978 IP6K2Q9UHH9 426 aa6.62□□□□□ -1.35
EFCAB13-213ENST00000523978 DSEQ9UL01 958 aa6.62□□□□□ -1.35
EFCAB13-213ENST00000523978 MPHOSPH10O00566 681 aaKnown RBP6.61□□□□□ -1.35
EFCAB13-213ENST00000523978 HTATSF1O43719 755 aaKnown RBP6.61□□□□□ -1.35
EFCAB13-213ENST00000523978 CNOT4O95628 575 aaKnown RBP6.61□□□□□ -1.35
EFCAB13-213ENST00000523978 CHGBP05060 677 aa6.61□□□□□ -1.35
EFCAB13-213ENST00000523978 U2AF1L5P0DN76 240 aaPredicted RBP6.61□□□□□ -1.35
EFCAB13-213ENST00000523978 HOXC13P31276 330 aa6.61□□□□□ -1.35
EFCAB13-213ENST00000523978 U2AF1Q01081 240 aaKnown RBP eCLIP6.61□□□□□ -1.35
EFCAB13-213ENST00000523978 PFKPQ01813 784 aa6.61□□□□□ -1.35
EFCAB13-213ENST00000523978 RAB33AQ14088 237 aa6.61□□□□□ -1.35
EFCAB13-213ENST00000523978 TRIM29Q14134 588 aa6.61□□□□□ -1.35
EFCAB13-213ENST00000523978 C16orf87Q6PH81 154 aa6.61□□□□□ -1.35
EFCAB13-213ENST00000523978 KCTD1Q719H9 257 aa6.61□□□□□ -1.35
EFCAB13-213ENST00000523978 GPR155Q7Z3F1 870 aa6.61□□□□□ -1.35
EFCAB13-213ENST00000523978 RALYLQ86SE5 291 aaKnown RBP6.61□□□□□ -1.35
EFCAB13-213ENST00000523978 PALM2Q8IXS6 379 aa6.61□□□□□ -1.35
EFCAB13-213ENST00000523978 CKAP2LQ8IYA6 745 aa6.61□□□□□ -1.35
EFCAB13-213ENST00000523978 CPXCR1Q8N123 301 aa6.61□□□□□ -1.35
EFCAB13-213ENST00000523978 STPG3Q8N7X2 389 aa6.61□□□□□ -1.35
EFCAB13-213ENST00000523978 SKA1Q96BD8 255 aa6.61□□□□□ -1.35
EFCAB13-213ENST00000523978 WWC2-AS2Q96NR7 200 aa6.61□□□□□ -1.35
EFCAB13-213ENST00000523978 GPR101Q96P66 508 aaPredicted RBP6.61□□□□□ -1.35
EFCAB13-213ENST00000523978 XPO4Q9C0E2 1151 aaKnown RBP6.61□□□□□ -1.35
EFCAB13-213ENST00000523978 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.61□□□□□ -1.35
EFCAB13-213ENST00000523978 IPPKQ9H8X2 491 aa6.61□□□□□ -1.35
EFCAB13-213ENST00000523978 PTPRHQ9HD43 1115 aa6.61□□□□□ -1.35
EFCAB13-213ENST00000523978 KCND1Q9NSA2 647 aa6.61□□□□□ -1.35
EFCAB13-213ENST00000523978 ARHGAP20Q9P2F6 1191 aa6.61□□□□□ -1.35
EFCAB13-213ENST00000523978 WASHC2AQ641Q2 1341 aa6.6□□□□□ -1.35
EFCAB13-213ENST00000523978 ZNF839A8K0R7 811 aa6.6□□□□□ -1.35
EFCAB13-213ENST00000523978 PATE3B3GLJ2 98 aa6.6□□□□□ -1.35
EFCAB13-213ENST00000523978 FAM47E-STBD1D6RA91 191 aa6.6□□□□□ -1.35
EFCAB13-213ENST00000523978 ACOT7O00154 380 aa6.6□□□□□ -1.35
EFCAB13-213ENST00000523978 CDC45O75419 566 aa6.6□□□□□ -1.35
EFCAB13-213ENST00000523978 FSHBP01225 129 aa6.6□□□□□ -1.35
EFCAB13-213ENST00000523978 ENO2P09104 434 aaPredicted RBP6.6□□□□□ -1.35
EFCAB13-213ENST00000523978 C6P13671 934 aa6.6□□□□□ -1.35
EFCAB13-213ENST00000523978 CSF2RBP32927 897 aa6.6□□□□□ -1.35
EFCAB13-213ENST00000523978 EPHA5P54756 1037 aa6.6□□□□□ -1.35
EFCAB13-213ENST00000523978 TOMM20Q15388 145 aa6.6□□□□□ -1.35
EFCAB13-213ENST00000523978 BRDTQ58F21 947 aaPredicted RBP6.6□□□□□ -1.35
EFCAB13-213ENST00000523978 WDR45BQ5MNZ6 344 aa6.6□□□□□ -1.35
EFCAB13-213ENST00000523978 CPLX2Q6PUV4 134 aaKnown RBP6.6□□□□□ -1.35
EFCAB13-213ENST00000523978 SAMD14Q8IZD0 417 aaPredicted RBP6.6□□□□□ -1.35
EFCAB13-213ENST00000523978 IFNL2Q8IZJ0 200 aa6.6□□□□□ -1.35
EFCAB13-213ENST00000523978 LRRC47Q8N1G4 583 aaKnown RBP6.6□□□□□ -1.35
EFCAB13-213ENST00000523978 SLC16A11Q8NCK7 471 aa6.6□□□□□ -1.35
EFCAB13-213ENST00000523978 MNS1Q8NEH6 495 aa6.6□□□□□ -1.35
EFCAB13-213ENST00000523978 SYAP1Q96A49 352 aaPredicted RBP6.6□□□□□ -1.35
EFCAB13-213ENST00000523978 TBC1D20Q96BZ9 403 aa6.6□□□□□ -1.35
EFCAB13-213ENST00000523978 CD244Q9BZW8 370 aa6.6□□□□□ -1.35
EFCAB13-213ENST00000523978 DEF6Q9H4E7 631 aa6.6□□□□□ -1.35
EFCAB13-213ENST00000523978 RIC8AQ9NPQ8 531 aa6.6□□□□□ -1.35
EFCAB13-213ENST00000523978 XPO7Q9UIA9 1087 aaKnown RBP6.6□□□□□ -1.35
EFCAB13-213ENST00000523978 TRAF6Q9Y4K3 522 aa6.6□□□□□ -1.35
EFCAB13-213ENST00000523978 GOLGA6L3A6NEY3 463 aa6.59□□□□□ -1.35
EFCAB13-213ENST00000523978 TMEM110-MUSTN1A8MSY1 372 aa6.59□□□□□ -1.35
EFCAB13-213ENST00000523978 PRSS47A8MTI9 375 aa6.59□□□□□ -1.35
EFCAB13-213ENST00000523978 VGLL3A8MV65 326 aa6.59□□□□□ -1.35
EFCAB13-213ENST00000523978 IPO7O95373 1038 aaKnown RBP6.59□□□□□ -1.35
EFCAB13-213ENST00000523978 IL18BPO95998 194 aa6.59□□□□□ -1.35
EFCAB13-213ENST00000523978 ATF3P18847 181 aa6.59□□□□□ -1.35
EFCAB13-213ENST00000523978 OAS2P29728 719 aaKnown RBP6.59□□□□□ -1.35
EFCAB13-213ENST00000523978 DDIT3P35638 169 aa6.59□□□□□ -1.35
EFCAB13-213ENST00000523978 MASP1P48740 699 aa6.59□□□□□ -1.35
EFCAB13-213ENST00000523978 PPM1FP49593 454 aaPredicted RBP6.59□□□□□ -1.35
EFCAB13-213ENST00000523978 GPSM2P81274 684 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms