RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 SORCS3Q9UPU3 1222 aa29.24■■■□□ 2.27
PVT1-219ENST00000523427 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP29.23■■■□□ 2.27
PVT1-219ENST00000523427 PRPF3O43395 683 aaKnown RBP29.23■■■□□ 2.27
PVT1-219ENST00000523427 EOMESO95936 686 aa29.23■■■□□ 2.27
PVT1-219ENST00000523427 ASGR2P07307 311 aa29.23■■■□□ 2.27
PVT1-219ENST00000523427 HMGB1P09429 215 aaKnown RBP29.23■■■□□ 2.27
PVT1-219ENST00000523427 RCAN1P53805 252 aa29.23■■■□□ 2.27
PVT1-219ENST00000523427 MTMR3Q13615 1198 aa29.23■■■□□ 2.27
PVT1-219ENST00000523427 BMS1Q14692 1282 aaKnown RBP29.23■■■□□ 2.27
PVT1-219ENST00000523427 MTERF2Q49AM1 385 aa29.23■■■□□ 2.27
PVT1-219ENST00000523427 BMP2KLQ5H9B9 411 aa29.23■■■□□ 2.27
PVT1-219ENST00000523427 ZNF598Q86UK7 904 aaKnown RBP29.23■■■□□ 2.27
PVT1-219ENST00000523427 VPS52Q8N1B4 723 aa29.23■■■□□ 2.27
PVT1-219ENST00000523427 NECTIN4Q96NY8 510 aa29.23■■■□□ 2.27
PVT1-219ENST00000523427 MRPL9Q9BYD2 267 aaKnown RBP29.23■■■□□ 2.27
PVT1-219ENST00000523427 UNC45AQ9H3U1 944 aa29.23■■■□□ 2.27
PVT1-219ENST00000523427 SEPT9Q9UHD8 586 aaPredicted RBP29.23■■■□□ 2.27
PVT1-219ENST00000523427 TMEM150BA6NC51 233 aa29.22■■■□□ 2.27
PVT1-219ENST00000523427 ITIH3Q06033 890 aa29.22■■■□□ 2.27
PVT1-219ENST00000523427 LRCH2Q5VUJ6 765 aa29.22■■■□□ 2.27
PVT1-219ENST00000523427 ZNF710Q8N1W2 664 aa29.22■■■□□ 2.27
PVT1-219ENST00000523427 BICD2Q8TD16 824 aa29.22■■■□□ 2.27
PVT1-219ENST00000523427 JAKMIP1Q96N16 626 aaKnown RBP29.22■■■□□ 2.27
PVT1-219ENST00000523427 TEKT3Q9BXF9 490 aa29.22■■■□□ 2.27
PVT1-219ENST00000523427 SLC26A6Q9BXS9 759 aa29.22■■■□□ 2.27
PVT1-219ENST00000523427 GCOM2Q9BZD3 368 aaPredicted RBP29.22■■■□□ 2.27
PVT1-219ENST00000523427 VPS54Q9P1Q0 977 aa29.22■■■□□ 2.27
PVT1-219ENST00000523427 INPP5FQ9Y2H2 1132 aa29.22■■■□□ 2.27
PVT1-219ENST00000523427 MYO10Q9HD67 2058 aa29.22■■■□□ 2.27
PVT1-219ENST00000523427 MTHFRP42898 656 aa29.21■■■□□ 2.27
PVT1-219ENST00000523427 TWF2Q6IBS0 349 aaKnown RBP29.21■■■□□ 2.27
PVT1-219ENST00000523427 TMEM173Q86WV6 379 aaPredicted RBP29.21■■■□□ 2.27
PVT1-219ENST00000523427 IRF2BPLQ9H1B7 796 aa29.21■■■□□ 2.27
PVT1-219ENST00000523427 LIMD1Q9UGP4 676 aa29.21■■■□□ 2.27
PVT1-219ENST00000523427 DBR1Q9UK59 544 aaKnown RBP29.21■■■□□ 2.27
PVT1-219ENST00000523427 A0A087WZ62 844 aa29.2■■■□□ 2.26
PVT1-219ENST00000523427 EDIL3O43854 480 aa29.2■■■□□ 2.26
PVT1-219ENST00000523427 EPCAMP16422 314 aa29.2■■■□□ 2.26
PVT1-219ENST00000523427 UBALD2Q8IYN6 164 aa29.2■■■□□ 2.26
PVT1-219ENST00000523427 FDXACB1Q9BRP7 624 aaPredicted RBP29.2■■■□□ 2.26
PVT1-219ENST00000523427 GBP3Q9H0R5 595 aa29.2■■■□□ 2.26
PVT1-219ENST00000523427 JAK3P52333 1124 aa29.19■■■□□ 2.26
PVT1-219ENST00000523427 ATAT1Q5SQI0 421 aa29.19■■■□□ 2.26
PVT1-219ENST00000523427 MIER3Q7Z3K6 550 aa29.19■■■□□ 2.26
PVT1-219ENST00000523427 TDRD5Q8NAT2 981 aaKnown RBP29.19■■■□□ 2.26
PVT1-219ENST00000523427 CCDC148Q8NFR7 591 aa29.19■■■□□ 2.26
PVT1-219ENST00000523427 RIT2Q99578 217 aa29.19■■■□□ 2.26
PVT1-219ENST00000523427 USP34Q70CQ2 3546 aa29.19■■■□□ 2.26
PVT1-219ENST00000523427 SFNP31947 248 aa29.18■■■□□ 2.26
PVT1-219ENST00000523427 PHKA2P46019 1235 aa29.18■■■□□ 2.26
PVT1-219ENST00000523427 RNASELQ05823 741 aaKnown RBP29.18■■■□□ 2.26
PVT1-219ENST00000523427 SLC5A5Q92911 643 aa29.18■■■□□ 2.26
PVT1-219ENST00000523427 SNX27Q96L92 541 aa29.18■■■□□ 2.26
PVT1-219ENST00000523427 PIN4Q9Y237 131 aaKnown RBP29.18■■■□□ 2.26
PVT1-219ENST00000523427 PTPRZ1P23471 2315 aaPredicted RBP29.17■■■□□ 2.26
PVT1-219ENST00000523427 SPDYE4A6NLX3 237 aa29.17■■■□□ 2.26
PVT1-219ENST00000523427 MEIS3P2A8K0S8 358 aa29.17■■■□□ 2.26
PVT1-219ENST00000523427 GALR2O43603 387 aaPredicted RBP29.17■■■□□ 2.26
PVT1-219ENST00000523427 NLRP5P59047 1200 aa29.17■■■□□ 2.26
PVT1-219ENST00000523427 CCT2P78371 535 aaKnown RBP29.17■■■□□ 2.26
PVT1-219ENST00000523427 TARBP2Q15633 366 aaKnown RBP29.17■■■□□ 2.26
PVT1-219ENST00000523427 BLOC1S2Q6QNY1 142 aa29.17■■■□□ 2.26
PVT1-219ENST00000523427 TMC5Q6UXY8 1006 aa29.17■■■□□ 2.26
PVT1-219ENST00000523427 RHPN2Q8IUC4 686 aa29.17■■■□□ 2.26
PVT1-219ENST00000523427 TMEM105Q8N8V8 129 aa29.17■■■□□ 2.26
PVT1-219ENST00000523427 FEZF2Q8TBJ5 459 aa29.17■■■□□ 2.26
PVT1-219ENST00000523427 ZBP1Q9H171 429 aa29.17■■■□□ 2.26
PVT1-219ENST00000523427 MFSD1Q9H3U5 465 aa29.17■■■□□ 2.26
PVT1-219ENST00000523427 CDC45O75419 566 aa29.16■■■□□ 2.26
PVT1-219ENST00000523427 DNM2P50570 870 aa29.16■■■□□ 2.26
PVT1-219ENST00000523427 GLB1LQ6UWU2 654 aa29.16■■■□□ 2.26
PVT1-219ENST00000523427 KSR1Q8IVT5 923 aa29.16■■■□□ 2.26
PVT1-219ENST00000523427 BCL7CQ8WUZ0 217 aaPredicted RBP29.16■■■□□ 2.26
PVT1-219ENST00000523427 NRDE2Q9H7Z3 1164 aa29.16■■■□□ 2.26
PVT1-219ENST00000523427 NCOA5Q9HCD5 579 aaKnown RBP29.16■■■□□ 2.26
PVT1-219ENST00000523427 CHST12Q9NRB3 414 aa29.16■■■□□ 2.26
PVT1-219ENST00000523427 SUCLA2Q9P2R7 463 aaPredicted RBP29.16■■■□□ 2.26
PVT1-219ENST00000523427 DDX11L8A8MPP1 907 aa29.15■■■□□ 2.26
PVT1-219ENST00000523427 SFPQP23246 707 aaKnown RBP eCLIP29.15■■■□□ 2.266e-6■■□□□ 14.5
PVT1-219ENST00000523427 USP11P51784 963 aa29.15■■■□□ 2.26
PVT1-219ENST00000523427 NOMO2Q5JPE7 1267 aa29.15■■■□□ 2.26
PVT1-219ENST00000523427 CABP7Q86V35 215 aa29.15■■■□□ 2.26
PVT1-219ENST00000523427 TBCKQ8TEA7 893 aa29.15■■■□□ 2.26
PVT1-219ENST00000523427 IGSF21Q96ID5 467 aa29.15■■■□□ 2.26
PVT1-219ENST00000523427 NLRP4Q96MN2 994 aa29.15■■■□□ 2.26
PVT1-219ENST00000523427 TBC1D13Q9NVG8 400 aa29.15■■■□□ 2.26
PVT1-219ENST00000523427 DZANK1Q9NVP4 752 aa29.15■■■□□ 2.26
PVT1-219ENST00000523427 WDR81Q562E7 1941 aa29.14■■■□□ 2.26
PVT1-219ENST00000523427 TDP2O95551 362 aa29.14■■■□□ 2.26
PVT1-219ENST00000523427 SSBP05455 408 aaKnown RBP eCLIP29.14■■■□□ 2.26
PVT1-219ENST00000523427 GALTP07902 379 aa29.14■■■□□ 2.26
PVT1-219ENST00000523427 CTSAP10619 480 aa29.14■■■□□ 2.26
PVT1-219ENST00000523427 NTRK3Q16288 839 aa29.14■■■□□ 2.26
PVT1-219ENST00000523427 XKR3Q5GH77 459 aa29.14■■■□□ 2.26
PVT1-219ENST00000523427 KIAA1841Q6NSI8 718 aa29.14■■■□□ 2.26
PVT1-219ENST00000523427 CATSPER4Q7RTX7 472 aa29.14■■■□□ 2.26
PVT1-219ENST00000523427 DDX53Q86TM3 631 aaKnown RBP29.14■■■□□ 2.26
PVT1-219ENST00000523427 RNF26Q9BY78 433 aaPredicted RBP29.14■■■□□ 2.26
PVT1-219ENST00000523427 NIFKQ9BYG3 293 aaKnown RBP29.14■■■□□ 2.26
PVT1-219ENST00000523427 FAM105AQ9NUU6 356 aa29.14■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms