RNA–Protein interactions for RNA: ENST00000522658.5

PABPC1-220, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-220ENST00000522658 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.25□□□□□ -1.25
PABPC1-220ENST00000522658 MRPL11Q9Y3B7 192 aaKnown RBP7.25□□□□□ -1.25
PABPC1-220ENST00000522658 INSL6Q9Y581 213 aa7.25□□□□□ -1.25
PABPC1-220ENST00000522658 SCN5AQ14524 2016 aa7.24□□□□□ -1.25
PABPC1-220ENST00000522658 LCHNA4D1U4 455 aa7.24□□□□□ -1.25
PABPC1-220ENST00000522658 NOP56O00567 594 aaKnown RBP7.24□□□□□ -1.25
PABPC1-220ENST00000522658 ZBTB39O15060 712 aa7.24□□□□□ -1.25
PABPC1-220ENST00000522658 DCXO43602 365 aa7.24□□□□□ -1.25
PABPC1-220ENST00000522658 IGLV1-40P01703 118 aa7.24□□□□□ -1.25
PABPC1-220ENST00000522658 ZNF286BP0CG31 522 aa7.24□□□□□ -1.25
PABPC1-220ENST00000522658 PDHBP11177 359 aa7.24□□□□□ -1.25
PABPC1-220ENST00000522658 PCP11498 1178 aaKnown RBP7.24□□□□□ -1.25
PABPC1-220ENST00000522658 SSTR4P31391 388 aa7.24□□□□□ -1.25
PABPC1-220ENST00000522658 CD68P34810 354 aaPredicted RBP7.24□□□□□ -1.25
PABPC1-220ENST00000522658 THPOP40225 353 aa7.24□□□□□ -1.25
PABPC1-220ENST00000522658 ERVK-21P61565 698 aa7.24□□□□□ -1.25
PABPC1-220ENST00000522658 ZNF543Q08ER8 600 aa7.24□□□□□ -1.25
PABPC1-220ENST00000522658 HYAL2Q12891 473 aa7.24□□□□□ -1.25
PABPC1-220ENST00000522658 CDC37Q16543 378 aaPredicted RBP7.24□□□□□ -1.25
PABPC1-220ENST00000522658 LY6KQ17RY6 165 aa7.24□□□□□ -1.25
PABPC1-220ENST00000522658 KIAA0753Q2KHM9 967 aa7.24□□□□□ -1.25
PABPC1-220ENST00000522658 LEXMQ3ZCV2 418 aa7.24□□□□□ -1.25
PABPC1-220ENST00000522658 TMEM63BQ5T3F8 832 aa7.24□□□□□ -1.25
PABPC1-220ENST00000522658 CEP135Q66GS9 1140 aa7.24□□□□□ -1.25
PABPC1-220ENST00000522658 ESR2Q92731 530 aa7.24□□□□□ -1.25
PABPC1-220ENST00000522658 PPP2R3CQ969Q6 453 aa7.24□□□□□ -1.25
PABPC1-220ENST00000522658 EVI5LQ96CN4 794 aa7.24□□□□□ -1.25
PABPC1-220ENST00000522658 MRPL38Q96DV4 380 aaKnown RBP7.24□□□□□ -1.25
PABPC1-220ENST00000522658 IWS1Q96ST2 819 aa7.24□□□□□ -1.25
PABPC1-220ENST00000522658 RMDN3Q96TC7 470 aa7.24□□□□□ -1.25
PABPC1-220ENST00000522658 POP1Q99575 1024 aaKnown RBP7.24□□□□□ -1.25
PABPC1-220ENST00000522658 TMEM47Q9BQJ4 181 aa7.24□□□□□ -1.25
PABPC1-220ENST00000522658 GTF2IRD1Q9UHL9 959 aa7.24□□□□□ -1.25
PABPC1-220ENST00000522658 ANAPC4Q9UJX5 808 aa7.24□□□□□ -1.25
PABPC1-220ENST00000522658 XIRP2A4UGR9 3374 aa7.23□□□□□ -1.25
PABPC1-220ENST00000522658 SCN10AQ9Y5Y9 1956 aa7.23□□□□□ -1.25
PABPC1-220ENST00000522658 C17orf102A2RUQ5 167 aa7.23□□□□□ -1.25
PABPC1-220ENST00000522658 LINC01553A4QN01 128 aa7.23□□□□□ -1.25
PABPC1-220ENST00000522658 KIAA1324LA8MWY0 1029 aaPredicted RBP7.23□□□□□ -1.25
PABPC1-220ENST00000522658 RSPH10B2B2RC85 870 aa7.23□□□□□ -1.25
PABPC1-220ENST00000522658 PI4K2BG5E9Z4 385 aa7.23□□□□□ -1.25
PABPC1-220ENST00000522658 GSC2O15499 205 aa7.23□□□□□ -1.25
PABPC1-220ENST00000522658 CFBP00751 764 aa7.23□□□□□ -1.25
PABPC1-220ENST00000522658 RSPH10BP0C881 870 aa7.23□□□□□ -1.25
PABPC1-220ENST00000522658 GNAT1P11488 350 aa7.23□□□□□ -1.25
PABPC1-220ENST00000522658 MYCLP12524 364 aaPredicted RBP7.23□□□□□ -1.25
PABPC1-220ENST00000522658 EDNRBP24530 442 aa7.23□□□□□ -1.25
PABPC1-220ENST00000522658 CTNNB1P35222 781 aa7.23□□□□□ -1.25
PABPC1-220ENST00000522658 HAND2P61296 217 aa7.23□□□□□ -1.25
PABPC1-220ENST00000522658 TRAF1Q13077 416 aa7.23□□□□□ -1.25
PABPC1-220ENST00000522658 NAA30Q147X3 362 aaPredicted RBP7.23□□□□□ -1.25
PABPC1-220ENST00000522658 ASPRV1Q53RT3 343 aa7.23□□□□□ -1.25
PABPC1-220ENST00000522658 KCNV1Q6PIU1 500 aa7.23□□□□□ -1.25
PABPC1-220ENST00000522658 TXNDC11Q6PKC3 985 aa7.23□□□□□ -1.25
PABPC1-220ENST00000522658 TMCO2Q7Z6W1 182 aaPredicted RBP7.23□□□□□ -1.25
PABPC1-220ENST00000522658 SESTD1Q86VW0 696 aa7.23□□□□□ -1.25
PABPC1-220ENST00000522658 PPTC7Q8NI37 304 aa7.23□□□□□ -1.25
PABPC1-220ENST00000522658 CLEC4DQ8WXI8 215 aa7.23□□□□□ -1.25
PABPC1-220ENST00000522658 SEPT8Q92599 483 aa7.23□□□□□ -1.25
PABPC1-220ENST00000522658 ATP6V0A1Q93050 837 aa7.23□□□□□ -1.25
PABPC1-220ENST00000522658 FAM46AQ96IP4 442 aaKnown RBP7.23□□□□□ -1.25
PABPC1-220ENST00000522658 SPATA33Q96N06 139 aa7.23□□□□□ -1.25
PABPC1-220ENST00000522658 TTC14Q96N46 770 aa7.23□□□□□ -1.25
PABPC1-220ENST00000522658 UBAC1Q9BSL1 405 aa7.23□□□□□ -1.25
PABPC1-220ENST00000522658 MKNK1Q9BUB5 465 aa7.23□□□□□ -1.25
PABPC1-220ENST00000522658 LACRTQ9GZZ8 138 aa7.23□□□□□ -1.25
PABPC1-220ENST00000522658 MAF1Q9H063 256 aa7.23□□□□□ -1.25
PABPC1-220ENST00000522658 KCNH6Q9H252 994 aa7.23□□□□□ -1.25
PABPC1-220ENST00000522658 RASSF4Q9H2L5 321 aa7.23□□□□□ -1.25
PABPC1-220ENST00000522658 NSUN3Q9H649 340 aaKnown RBP7.23□□□□□ -1.25
PABPC1-220ENST00000522658 SUGCTQ9HAC7 445 aa7.23□□□□□ -1.25
PABPC1-220ENST00000522658 MLXIPQ9HAP2 919 aa7.23□□□□□ -1.25
PABPC1-220ENST00000522658 IL17RBQ9NRM6 502 aa7.23□□□□□ -1.25
PABPC1-220ENST00000522658 HELLSQ9NRZ9 838 aa7.23□□□□□ -1.25
PABPC1-220ENST00000522658 CLDND1Q9NY35 253 aa7.23□□□□□ -1.25
PABPC1-220ENST00000522658 HDAC6Q9UBN7 1215 aa7.23□□□□□ -1.25
PABPC1-220ENST00000522658 ZNF215Q9UL58 517 aaPredicted RBP7.23□□□□□ -1.25
PABPC1-220ENST00000522658 RWDD3Q9Y3V2 267 aa7.23□□□□□ -1.25
PABPC1-220ENST00000522658 H3BQ06 376 aaPredicted RBP7.22□□□□□ -1.25
PABPC1-220ENST00000522658 NCK2O43639 380 aa7.22□□□□□ -1.25
PABPC1-220ENST00000522658 NBNO60934 754 aa7.22□□□□□ -1.25
PABPC1-220ENST00000522658 CSPG5O95196 566 aa7.22□□□□□ -1.25
PABPC1-220ENST00000522658 ARIH2O95376 493 aa7.22□□□□□ -1.25
PABPC1-220ENST00000522658 CXCL10P02778 98 aa7.22□□□□□ -1.25
PABPC1-220ENST00000522658 CTSHP09668 335 aa7.22□□□□□ -1.25
PABPC1-220ENST00000522658 PARP1P09874 1014 aaKnown RBP7.22□□□□□ -1.25
PABPC1-220ENST00000522658 GOLGA8HP0CJ92 632 aa7.22□□□□□ -1.25
PABPC1-220ENST00000522658 HSPD1P10809 573 aaKnown RBP7.22□□□□□ -1.25
PABPC1-220ENST00000522658 IL9P15248 144 aa7.22□□□□□ -1.25
PABPC1-220ENST00000522658 CDC27P30260 824 aa7.22□□□□□ -1.25
PABPC1-220ENST00000522658 CCND2P30279 289 aa7.22□□□□□ -1.25
PABPC1-220ENST00000522658 NT5C2P49902 561 aa7.22□□□□□ -1.25
PABPC1-220ENST00000522658 MRE11P49959 708 aa7.22□□□□□ -1.25
PABPC1-220ENST00000522658 RBL2Q08999 1139 aa7.22□□□□□ -1.25
PABPC1-220ENST00000522658 GPM6BQ13491 265 aa7.22□□□□□ -1.25
PABPC1-220ENST00000522658 GNPTABQ3T906 1256 aa7.22□□□□□ -1.25
PABPC1-220ENST00000522658 MCMDC2Q4G0Z9 681 aa7.22□□□□□ -1.25
PABPC1-220ENST00000522658 ZNF618Q5T7W0 954 aa7.22□□□□□ -1.25
PABPC1-220ENST00000522658 FAM178BQ8IXR5 827 aa7.22□□□□□ -1.25
PABPC1-220ENST00000522658 CEP120Q8N960 986 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms