RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 THNSL1Q8IYQ7 743 aa23.18■■□□□ 1.3
SDCBP-209ENST00000522243 ABI1Q8IZP0 508 aa23.18■■□□□ 1.3
SDCBP-209ENST00000522243 MICAL1Q8TDZ2 1067 aa23.18■■□□□ 1.3
SDCBP-209ENST00000522243 ARID2Q68CP9 1835 aa23.17■■□□□ 1.3
SDCBP-209ENST00000522243 ZBTB39O15060 712 aa23.17■■□□□ 1.3
SDCBP-209ENST00000522243 HOXA2O43364 376 aa23.17■■□□□ 1.3
SDCBP-209ENST00000522243 TBX10O75333 385 aa23.17■■□□□ 1.3
SDCBP-209ENST00000522243 FGF18O76093 207 aa23.17■■□□□ 1.3
SDCBP-209ENST00000522243 POLGP54098 1239 aaPredicted RBP23.17■■□□□ 1.3
SDCBP-209ENST00000522243 PUS10Q3MIT2 529 aaKnown RBP23.17■■□□□ 1.3
SDCBP-209ENST00000522243 CLLU1OSQ5K130 101 aa23.17■■□□□ 1.3
SDCBP-209ENST00000522243 ZNF410Q86VK4 478 aa23.17■■□□□ 1.3
SDCBP-209ENST00000522243 CCDC83Q8IWF9 413 aa23.17■■□□□ 1.3
SDCBP-209ENST00000522243 C4orf19Q8IY42 314 aa23.17■■□□□ 1.3
SDCBP-209ENST00000522243 TMEM143Q96AN5 459 aa23.17■■□□□ 1.3
SDCBP-209ENST00000522243 JPH2Q9BR39 696 aaPredicted RBP23.17■■□□□ 1.3
SDCBP-209ENST00000522243 A0A0U1RQF3 1178 aa23.16■■□□□ 1.3
SDCBP-209ENST00000522243 LAG3P18627 525 aa23.16■■□□□ 1.3
SDCBP-209ENST00000522243 SFPQP23246 707 aaKnown RBP eCLIP23.16■■□□□ 1.3
SDCBP-209ENST00000522243 YWHABP31946 246 aaKnown RBP23.16■■□□□ 1.3
SDCBP-209ENST00000522243 SSTR3P32745 418 aaPredicted RBP23.16■■□□□ 1.3
SDCBP-209ENST00000522243 NRIP1P48552 1158 aa23.16■■□□□ 1.3
SDCBP-209ENST00000522243 ADAM15Q13444 863 aa23.16■■□□□ 1.3
SDCBP-209ENST00000522243 CALCRLQ16602 461 aa23.16■■□□□ 1.3
SDCBP-209ENST00000522243 TPH2Q8IWU9 490 aa23.16■■□□□ 1.3
SDCBP-209ENST00000522243 HELQQ8TDG4 1101 aa23.16■■□□□ 1.3
SDCBP-209ENST00000522243 SLC7A3Q8WY07 619 aa23.16■■□□□ 1.3
SDCBP-209ENST00000522243 PPP2R3CQ969Q6 453 aa23.16■■□□□ 1.3
SDCBP-209ENST00000522243 DACT1Q9NYF0 836 aa23.16■■□□□ 1.3
SDCBP-209ENST00000522243 PCDHA12Q9UN75 941 aa23.16■■□□□ 1.3
SDCBP-209ENST00000522243 LIMCH1Q9UPQ0 1083 aa23.16■■□□□ 1.3
SDCBP-209ENST00000522243 ATF7P17544 494 aaPredicted RBP23.15■■□□□ 1.3
SDCBP-209ENST00000522243 ATP2B1P20020 1258 aa23.15■■□□□ 1.3
SDCBP-209ENST00000522243 PBX3P40426 434 aa23.15■■□□□ 1.3
SDCBP-209ENST00000522243 NDUFV1P49821 464 aa23.15■■□□□ 1.3
SDCBP-209ENST00000522243 LONRF3Q496Y0 759 aa23.15■■□□□ 1.3
SDCBP-209ENST00000522243 XKR9Q5GH70 373 aa23.15■■□□□ 1.3
SDCBP-209ENST00000522243 TWF2Q6IBS0 349 aaKnown RBP23.15■■□□□ 1.3
SDCBP-209ENST00000522243 CATSPER4Q7RTX7 472 aa23.15■■□□□ 1.3
SDCBP-209ENST00000522243 ZNF598Q86UK7 904 aaKnown RBP23.15■■□□□ 1.3
SDCBP-209ENST00000522243 GJD3Q8N144 294 aa23.15■■□□□ 1.3
SDCBP-209ENST00000522243 LRRC43Q8N309 656 aa23.15■■□□□ 1.3
SDCBP-209ENST00000522243 INO80BQ9C086 356 aaPredicted RBP23.15■■□□□ 1.3
SDCBP-209ENST00000522243 DHX33Q9H6R0 707 aaKnown RBP23.15■■□□□ 1.3
SDCBP-209ENST00000522243 ZSWIM4Q9H7M6 989 aa23.15■■□□□ 1.3
SDCBP-209ENST00000522243 TLR9Q9NR96 1032 aa23.15■■□□□ 1.3
SDCBP-209ENST00000522243 PIN4Q9Y237 131 aaKnown RBP23.15■■□□□ 1.3
SDCBP-209ENST00000522243 COL4A3BPQ9Y5P4 624 aa23.15■■□□□ 1.3
SDCBP-209ENST00000522243 SLITRK3O94933 977 aa23.14■■□□□ 1.29
SDCBP-209ENST00000522243 SRGAP2CP0DJJ0 459 aa23.14■■□□□ 1.29
SDCBP-209ENST00000522243 TXKP42681 527 aa23.14■■□□□ 1.29
SDCBP-209ENST00000522243 ERVFC1P60507 584 aa23.14■■□□□ 1.29
SDCBP-209ENST00000522243 UBE3AQ05086 875 aa23.14■■□□□ 1.29
SDCBP-209ENST00000522243 KCNT2Q6UVM3 1135 aa23.14■■□□□ 1.29
SDCBP-209ENST00000522243 OTUD6AQ7L8S5 288 aa23.14■■□□□ 1.29
SDCBP-209ENST00000522243 LPPQ93052 612 aa23.14■■□□□ 1.29
SDCBP-209ENST00000522243 EIF2AK1Q9BQI3 630 aaKnown RBP23.14■■□□□ 1.29
SDCBP-209ENST00000522243 TTC12Q9H892 705 aaPredicted RBP23.14■■□□□ 1.29
SDCBP-209ENST00000522243 IFT122Q9HBG6 1241 aa23.14■■□□□ 1.29
SDCBP-209ENST00000522243 CHST12Q9NRB3 414 aa23.14■■□□□ 1.29
SDCBP-209ENST00000522243 PER2O15055 1255 aa23.13■■□□□ 1.29
SDCBP-209ENST00000522243 MBTPS2O43462 519 aa23.13■■□□□ 1.29
SDCBP-209ENST00000522243 NEMFO60524 1076 aa23.13■■□□□ 1.29
SDCBP-209ENST00000522243 EOMESO95936 686 aa23.13■■□□□ 1.29
SDCBP-209ENST00000522243 COL9A1P20849 921 aa23.13■■□□□ 1.29
SDCBP-209ENST00000522243 RFC5P40937 340 aa23.13■■□□□ 1.29
SDCBP-209ENST00000522243 PHKA2P46019 1235 aa23.13■■□□□ 1.29
SDCBP-209ENST00000522243 EMC2Q15006 297 aa23.13■■□□□ 1.29
SDCBP-209ENST00000522243 CSPP1Q1MSJ5 1256 aa23.13■■□□□ 1.29
SDCBP-209ENST00000522243 PRPF31Q8WWY3 499 aaKnown RBP23.13■■□□□ 1.29
SDCBP-209ENST00000522243 ZNF558Q96NG5 402 aa23.13■■□□□ 1.29
SDCBP-209ENST00000522243 TLE6Q9H808 572 aa23.13■■□□□ 1.29
SDCBP-209ENST00000522243 FAM50BQ9Y247 325 aa23.13■■□□□ 1.29
SDCBP-209ENST00000522243 C8orf34Q49A92 452 aa23.12■■□□□ 1.29
SDCBP-209ENST00000522243 EFHBQ8N7U6 833 aa23.12■■□□□ 1.29
SDCBP-209ENST00000522243 PSPC1Q8WXF1 523 aaKnown RBP23.12■■□□□ 1.29
SDCBP-209ENST00000522243 MRPS27Q92552 414 aaKnown RBP23.12■■□□□ 1.29
SDCBP-209ENST00000522243 C1QTNF1Q9BXJ1 281 aa23.12■■□□□ 1.29
SDCBP-209ENST00000522243 TMEM60Q9H2L4 133 aa23.12■■□□□ 1.29
SDCBP-209ENST00000522243 RAPGEFL1Q9UHV5 662 aa23.12■■□□□ 1.29
SDCBP-209ENST00000522243 CD207Q9UJ71 328 aa23.12■■□□□ 1.29
SDCBP-209ENST00000522243 PPME1Q9Y570 386 aa23.12■■□□□ 1.29
SDCBP-209ENST00000522243 A0A087WWV3 80 aa23.11■■□□□ 1.29
SDCBP-209ENST00000522243 MCM7P33993 719 aa23.11■■□□□ 1.29
SDCBP-209ENST00000522243 LAMTOR4Q0VGL1 99 aa23.11■■□□□ 1.29
SDCBP-209ENST00000522243 SAFBQ15424 915 aaKnown RBP eCLIP23.11■■□□□ 1.29
SDCBP-209ENST00000522243 PLPP4Q5VZY2 271 aa23.11■■□□□ 1.29
SDCBP-209ENST00000522243 EXOC8Q8IYI6 725 aa23.11■■□□□ 1.29
SDCBP-209ENST00000522243 C8orf76Q96K31 380 aa23.11■■□□□ 1.29
SDCBP-209ENST00000522243 KIF2CQ99661 725 aa23.11■■□□□ 1.29
SDCBP-209ENST00000522243 MTRQ99707 1265 aa23.11■■□□□ 1.29
SDCBP-209ENST00000522243 MINDY3Q9H8M7 445 aa23.11■■□□□ 1.29
SDCBP-209ENST00000522243 FAM105AQ9NUU6 356 aa23.11■■□□□ 1.29
SDCBP-209ENST00000522243 CLEC1BQ9P126 229 aa23.11■■□□□ 1.29
SDCBP-209ENST00000522243 BARX2Q9UMQ3 279 aaPredicted RBP23.11■■□□□ 1.29
SDCBP-209ENST00000522243 NCOR1O75376 2440 aa23.1■■□□□ 1.29
SDCBP-209ENST00000522243 MEIS3P2A8K0S8 358 aa23.1■■□□□ 1.29
SDCBP-209ENST00000522243 NT5C1B-RDH14C9J2C7 533 aa23.1■■□□□ 1.29
SDCBP-209ENST00000522243 GLP2RO95838 553 aa23.1■■□□□ 1.29
SDCBP-209ENST00000522243 RBM10P98175 930 aaKnown RBP23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms