RNA–Protein interactions for RNA: ENST00000520909.5

CLK4-207, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,305 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-207ENST00000520909 LENG9Q96B70 501 aa6.26□□□□□ -1.41
CLK4-207ENST00000520909 SCLYQ96I15 445 aa6.26□□□□□ -1.41
CLK4-207ENST00000520909 BOCQ9BWV1 1114 aa6.26□□□□□ -1.41
CLK4-207ENST00000520909 KCMF1Q9P0J7 381 aa6.26□□□□□ -1.41
CLK4-207ENST00000520909 NUDT3O95989 172 aa6.25□□□□□ -1.41
CLK4-207ENST00000520909 JUNP05412 331 aaKnown RBP6.25□□□□□ -1.41
CLK4-207ENST00000520909 VSIG10L2P0DP72 767 aa6.25□□□□□ -1.41
CLK4-207ENST00000520909 FNTBP49356 437 aa6.25□□□□□ -1.41
CLK4-207ENST00000520909 PTPAQ15257 358 aa6.25□□□□□ -1.41
CLK4-207ENST00000520909 TRIM61Q5EBN2 209 aa6.25□□□□□ -1.41
CLK4-207ENST00000520909 GPR150Q8NGU9 434 aa6.25□□□□□ -1.41
CLK4-207ENST00000520909 ARL8AQ96BM9 186 aa6.25□□□□□ -1.41
CLK4-207ENST00000520909 PGBD4Q96DM1 585 aa6.25□□□□□ -1.41
CLK4-207ENST00000520909 MAML3Q96JK9 1138 aa6.25□□□□□ -1.41
CLK4-207ENST00000520909 WDR92Q96MX6 357 aa6.25□□□□□ -1.41
CLK4-207ENST00000520909 TRPS1Q9UHF7 1281 aa6.25□□□□□ -1.41
CLK4-207ENST00000520909 SFMBT1Q9UHJ3 866 aa6.25□□□□□ -1.41
CLK4-207ENST00000520909 TCRBV16S1A1N1A0A5B0 115 aa6.25□□□□□ -1.41
CLK4-207ENST00000520909 KLRG2A4D1S0 409 aaPredicted RBP6.25□□□□□ -1.41
CLK4-207ENST00000520909 IPO13O94829 963 aaKnown RBP6.25□□□□□ -1.41
CLK4-207ENST00000520909 PRLP01236 227 aa6.25□□□□□ -1.41
CLK4-207ENST00000520909 KCNA6P17658 529 aa6.25□□□□□ -1.41
CLK4-207ENST00000520909 LY6G5CQ5SRR4 150 aa6.25□□□□□ -1.41
CLK4-207ENST00000520909 HTR3DQ70Z44 454 aa6.25□□□□□ -1.41
CLK4-207ENST00000520909 OTOP1Q7RTM1 612 aa6.25□□□□□ -1.41
CLK4-207ENST00000520909 CLEC14AQ86T13 490 aa6.25□□□□□ -1.41
CLK4-207ENST00000520909 VRK3Q8IV63 474 aa6.25□□□□□ -1.41
CLK4-207ENST00000520909 DYDC2Q96IM9 177 aa6.25□□□□□ -1.41
CLK4-207ENST00000520909 ZNF512Q96ME7 567 aaPredicted RBP6.25□□□□□ -1.41
CLK4-207ENST00000520909 PACSIN3Q9UKS6 424 aa6.25□□□□□ -1.41
CLK4-207ENST00000520909 CCDC163A0A0D9SF12 145 aa6.24□□□□□ -1.41
CLK4-207ENST00000520909 PPFIA4O75335 1185 aa6.24□□□□□ -1.41
CLK4-207ENST00000520909 KRT37O76014 449 aa6.24□□□□□ -1.41
CLK4-207ENST00000520909 TOX4O94842 621 aa6.24□□□□□ -1.41
CLK4-207ENST00000520909 PROZP22891 400 aa6.24□□□□□ -1.41
CLK4-207ENST00000520909 SLFN12LQ6IEE8 588 aa6.24□□□□□ -1.41
CLK4-207ENST00000520909 ABHD17CQ6PCB6 329 aa6.24□□□□□ -1.41
CLK4-207ENST00000520909 MB21D1Q8N884 522 aa6.24□□□□□ -1.41
CLK4-207ENST00000520909 MDGA1Q8NFP4 955 aa6.24□□□□□ -1.41
CLK4-207ENST00000520909 ACSS2Q9NR19 701 aa6.24□□□□□ -1.41
CLK4-207ENST00000520909 NCDNQ9UBB6 729 aa6.24□□□□□ -1.41
CLK4-207ENST00000520909 FZD1Q9UP38 647 aa6.24□□□□□ -1.41
CLK4-207ENST00000520909 UBA6A0AVT1 1052 aaPredicted RBP6.23□□□□□ -1.41
CLK4-207ENST00000520909 LMNAP02545 664 aaKnown RBP6.23□□□□□ -1.41
CLK4-207ENST00000520909 LMO1P25800 156 aa6.23□□□□□ -1.41
CLK4-207ENST00000520909 KIF11P52732 1056 aa6.23□□□□□ -1.41
CLK4-207ENST00000520909 NPEPPSP55786 919 aa6.23□□□□□ -1.41
CLK4-207ENST00000520909 CCDC142Q17RM4 750 aa6.23□□□□□ -1.41
CLK4-207ENST00000520909 TTC38Q5R3I4 469 aa6.23□□□□□ -1.41
CLK4-207ENST00000520909 RHOUQ7L0Q8 258 aa6.23□□□□□ -1.41
CLK4-207ENST00000520909 PROKR1Q8TCW9 393 aa6.23□□□□□ -1.41
CLK4-207ENST00000520909 THAP3Q8WTV1 239 aaPredicted RBP6.23□□□□□ -1.41
CLK4-207ENST00000520909 RIOX1Q9H6W3 641 aa6.23□□□□□ -1.41
CLK4-207ENST00000520909 ZNHIT2Q9UHR6 403 aa6.23□□□□□ -1.41
CLK4-207ENST00000520909 SYNPO2Q9UMS6 1093 aa6.23□□□□□ -1.41
CLK4-207ENST00000520909 KCNQ2O43526 872 aa6.22□□□□□ -1.41
CLK4-207ENST00000520909 ABHD16AO95870 558 aa6.22□□□□□ -1.41
CLK4-207ENST00000520909 ITGB1P05556 798 aa6.22□□□□□ -1.41
CLK4-207ENST00000520909 ATP2B1P20020 1258 aa6.22□□□□□ -1.41
CLK4-207ENST00000520909 LRP10Q7Z4F1 713 aa6.22□□□□□ -1.41
CLK4-207ENST00000520909 BRAPQ7Z569 592 aa6.22□□□□□ -1.41
CLK4-207ENST00000520909 BMP8AQ7Z5Y6 402 aa6.22□□□□□ -1.41
CLK4-207ENST00000520909 CMTM4Q8IZR5 234 aa6.22□□□□□ -1.41
CLK4-207ENST00000520909 ST8SIA2Q92186 375 aa6.22□□□□□ -1.41
CLK4-207ENST00000520909 RPGRQ92834 1020 aaKnown RBP6.22□□□□□ -1.41
CLK4-207ENST00000520909 MLST8Q9BVC4 326 aa6.22□□□□□ -1.41
CLK4-207ENST00000520909 MRPL4Q9BYD3 311 aaKnown RBP6.22□□□□□ -1.41
CLK4-207ENST00000520909 C14orf93Q9H972 538 aaKnown RBP6.22□□□□□ -1.41
CLK4-207ENST00000520909 POLR3BQ9NW08 1133 aaPredicted RBP6.22□□□□□ -1.41
CLK4-207ENST00000520909 DNAI1Q9UI46 699 aa6.22□□□□□ -1.41
CLK4-207ENST00000520909 RECQL4O94761 1208 aa6.21□□□□□ -1.42
CLK4-207ENST00000520909 CYP17A1P05093 508 aa6.21□□□□□ -1.42
CLK4-207ENST00000520909 GNAT2P19087 354 aa6.21□□□□□ -1.42
CLK4-207ENST00000520909 FBLP22087 321 aaKnown RBP6.21□□□□□ -1.42
CLK4-207ENST00000520909 KIR2DL3P43628 341 aa6.21□□□□□ -1.42
CLK4-207ENST00000520909 BCAR1P56945 870 aa6.21□□□□□ -1.42
CLK4-207ENST00000520909 PRAMEF9Q5VWM5 478 aa6.21□□□□□ -1.42
CLK4-207ENST00000520909 C1QL3Q5VWW1 255 aa6.21□□□□□ -1.42
CLK4-207ENST00000520909 NAIF1Q69YI7 327 aaPredicted RBP6.21□□□□□ -1.42
CLK4-207ENST00000520909 KCNV1Q6PIU1 500 aa6.21□□□□□ -1.42
CLK4-207ENST00000520909 FGD2Q7Z6J4 655 aa6.21□□□□□ -1.42
CLK4-207ENST00000520909 DDX53Q86TM3 631 aaKnown RBP6.21□□□□□ -1.42
CLK4-207ENST00000520909 NME9Q86XW9 330 aa6.21□□□□□ -1.42
CLK4-207ENST00000520909 TUBGCP5Q96RT8 1024 aa6.21□□□□□ -1.42
CLK4-207ENST00000520909 SORCS3Q9UPU3 1222 aa6.21□□□□□ -1.42
CLK4-207ENST00000520909 MAFGO15525 162 aa6.2□□□□□ -1.42
CLK4-207ENST00000520909 SPIDRQ14159 915 aa6.2□□□□□ -1.42
CLK4-207ENST00000520909 ZSWIM2Q8NEG5 633 aa6.2□□□□□ -1.42
CLK4-207ENST00000520909 CPT1CQ8TCG5 803 aa6.2□□□□□ -1.42
CLK4-207ENST00000520909 FAM193BQ96PV7 902 aaPredicted RBP6.2□□□□□ -1.42
CLK4-207ENST00000520909 PCIF1Q9H4Z3 704 aa6.2□□□□□ -1.42
CLK4-207ENST00000520909 PTGFRNQ9P2B2 879 aa6.2□□□□□ -1.42
CLK4-207ENST00000520909 CADPSQ9ULU8 1353 aa6.19□□□□□ -1.42
CLK4-207ENST00000520909 M0R2C6 588 aa6.19□□□□□ -1.42
CLK4-207ENST00000520909 HNRNPLP14866 589 aaKnown RBP eCLIP6.19□□□□□ -1.42
CLK4-207ENST00000520909 MECP2P51608 486 aaKnown RBP6.19□□□□□ -1.42
CLK4-207ENST00000520909 MRPS21P82921 87 aaKnown RBP6.19□□□□□ -1.42
CLK4-207ENST00000520909 TIGD2Q4W5G0 525 aa6.19□□□□□ -1.42
CLK4-207ENST00000520909 APBB1IPQ7Z5R6 666 aaPredicted RBP6.19□□□□□ -1.42
CLK4-207ENST00000520909 DEPDC7Q96QD5 511 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms