RNA–Protein interactions for RNA: ENST00000519604.5

ARFGAP1-212, Transcript of ADP ribosylation factor GTPase activating protein 1, humanhuman

TSL 2 BASIC

Gene ARFGAP1, Length 3,191 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP1-212ENST00000519604 NR1H4Q96RI1 486 aaPredicted RBP15.29■□□□□ 0.04
ARFGAP1-212ENST00000519604 SNX24Q9Y343 169 aa15.29■□□□□ 0.04
ARFGAP1-212ENST00000519604 POTEMA6NI47 508 aa15.29■□□□□ 0.04
ARFGAP1-212ENST00000519604 ASAP2O43150 1006 aa15.29■□□□□ 0.04
ARFGAP1-212ENST00000519604 ALDH3A1P30838 453 aa15.29■□□□□ 0.04
ARFGAP1-212ENST00000519604 RIPK1Q13546 671 aa15.29■□□□□ 0.04
ARFGAP1-212ENST00000519604 OTUD6AQ7L8S5 288 aa15.29■□□□□ 0.04
ARFGAP1-212ENST00000519604 KCNK18Q7Z418 384 aa15.29■□□□□ 0.04
ARFGAP1-212ENST00000519604 LRRC57Q8N9N7 239 aa15.29■□□□□ 0.04
ARFGAP1-212ENST00000519604 PNMA1Q8ND90 353 aa15.29■□□□□ 0.04
ARFGAP1-212ENST00000519604 EPS8L3Q8TE67 593 aaKnown RBP15.29■□□□□ 0.04
ARFGAP1-212ENST00000519604 LARP4BQ92615 738 aaKnown RBP15.29■□□□□ 0.04
ARFGAP1-212ENST00000519604 DDX12PQ92771 950 aa15.29■□□□□ 0.04
ARFGAP1-212ENST00000519604 CEP295NLQ96MC4 621 aa15.29■□□□□ 0.04
ARFGAP1-212ENST00000519604 NUDT12Q9BQG2 462 aa15.29■□□□□ 0.04
ARFGAP1-212ENST00000519604 ZMYND12Q9H0C1 365 aa15.29■□□□□ 0.04
ARFGAP1-212ENST00000519604 MAGEF1Q9HAY2 307 aa15.29■□□□□ 0.04
ARFGAP1-212ENST00000519604 FGFR1OP2Q9NVK5 253 aa15.29■□□□□ 0.04
ARFGAP1-212ENST00000519604 COL22A1Q8NFW1 1626 aaPredicted RBP15.28■□□□□ 0.04
ARFGAP1-212ENST00000519604 CFAP73A6NFT4 308 aa15.28■□□□□ 0.04
ARFGAP1-212ENST00000519604 CYTH3O43739 400 aa15.28■□□□□ 0.04
ARFGAP1-212ENST00000519604 SLC29A2Q14542 456 aa15.28■□□□□ 0.04
ARFGAP1-212ENST00000519604 ITIH4Q14624 930 aa15.28■□□□□ 0.04
ARFGAP1-212ENST00000519604 ANKRD20A2Q5SQ80 823 aa15.28■□□□□ 0.04
ARFGAP1-212ENST00000519604 ANKRD20A1Q5TYW2 823 aa15.28■□□□□ 0.04
ARFGAP1-212ENST00000519604 ANKRD20A3Q5VUR7 823 aa15.28■□□□□ 0.04
ARFGAP1-212ENST00000519604 RNF25Q96BH1 459 aaPredicted RBP15.28■□□□□ 0.04
ARFGAP1-212ENST00000519604 VAT1LQ9HCJ6 419 aa15.28■□□□□ 0.04
ARFGAP1-212ENST00000519604 DBR1Q9UK59 544 aaKnown RBP15.28■□□□□ 0.04
ARFGAP1-212ENST00000519604 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.28■□□□□ 0.04
ARFGAP1-212ENST00000519604 AFF2P51816 1311 aa15.28■□□□□ 0.04
ARFGAP1-212ENST00000519604 LRRC63Q05C16 580 aa15.28■□□□□ 0.04
ARFGAP1-212ENST00000519604 DENND2CQ68D51 928 aa15.28■□□□□ 0.04
ARFGAP1-212ENST00000519604 ALKBH5Q6P6C2 394 aaKnown RBP15.28■□□□□ 0.04
ARFGAP1-212ENST00000519604 CEP128Q6ZU80 1094 aa15.28■□□□□ 0.04
ARFGAP1-212ENST00000519604 EIF1ADQ8N9N8 165 aaKnown RBP15.28■□□□□ 0.04
ARFGAP1-212ENST00000519604 ZBTB8BQ8NAP8 495 aaPredicted RBP15.28■□□□□ 0.04
ARFGAP1-212ENST00000519604 SLC17A8Q8NDX2 589 aa15.28■□□□□ 0.04
ARFGAP1-212ENST00000519604 TPCN2Q8NHX9 752 aa15.28■□□□□ 0.04
ARFGAP1-212ENST00000519604 CCHCR1Q8TD31 782 aa15.28■□□□□ 0.04
ARFGAP1-212ENST00000519604 ATP8B4Q8TF62 1192 aa15.28■□□□□ 0.04
ARFGAP1-212ENST00000519604 NDNQ99608 321 aa15.28■□□□□ 0.04
ARFGAP1-212ENST00000519604 OXCT2Q9BYC2 517 aaPredicted RBP15.28■□□□□ 0.04
ARFGAP1-212ENST00000519604 EPB41L4BQ9H329 900 aa15.28■□□□□ 0.04
ARFGAP1-212ENST00000519604 KCNMB3Q9NPA1 279 aa15.28■□□□□ 0.04
ARFGAP1-212ENST00000519604 JAG2Q9Y219 1238 aa15.28■□□□□ 0.04
ARFGAP1-212ENST00000519604 GOLGB1Q14789 3259 aaKnown RBP15.28■□□□□ 0.04
ARFGAP1-212ENST00000519604 P4HA2O15460 535 aa15.28■□□□□ 0.04
ARFGAP1-212ENST00000519604 HNRNPCP07910 306 aaKnown RBP eCLIP15.28■□□□□ 0.042e-9■□□□□ 9.8
ARFGAP1-212ENST00000519604 MMP13P45452 471 aa15.28■□□□□ 0.04
ARFGAP1-212ENST00000519604 TUFMP49411 452 aaKnown RBP15.28■□□□□ 0.04
ARFGAP1-212ENST00000519604 NAPAP54920 295 aa15.28■□□□□ 0.04
ARFGAP1-212ENST00000519604 ZNF211Q13398 564 aaPredicted RBP15.28■□□□□ 0.04
ARFGAP1-212ENST00000519604 P3H1Q32P28 736 aa15.28■□□□□ 0.04
ARFGAP1-212ENST00000519604 LCA5Q86VQ0 697 aa15.28■□□□□ 0.04
ARFGAP1-212ENST00000519604 ARHGAP18Q8N392 663 aa15.28■□□□□ 0.04
ARFGAP1-212ENST00000519604 SNRNP27Q8WVK2 155 aaKnown RBP15.28■□□□□ 0.04
ARFGAP1-212ENST00000519604 GJA10Q969M2 543 aa15.28■□□□□ 0.04
ARFGAP1-212ENST00000519604 DDX27Q96GQ7 796 aaKnown RBP15.28■□□□□ 0.04
ARFGAP1-212ENST00000519604 NGLY1Q96IV0 654 aa15.28■□□□□ 0.04
ARFGAP1-212ENST00000519604 AK8Q96MA6 479 aa15.28■□□□□ 0.04
ARFGAP1-212ENST00000519604 SRPK1Q96SB4 655 aaKnown RBP15.28■□□□□ 0.04
ARFGAP1-212ENST00000519604 EDEM3Q9BZQ6 932 aa15.28■□□□□ 0.04
ARFGAP1-212ENST00000519604 WNK3Q9BYP7 1800 aa15.27■□□□□ 0.04
ARFGAP1-212ENST00000519604 TRIM43BA6NCK2 446 aa15.27■□□□□ 0.04
ARFGAP1-212ENST00000519604 FOXO6A8MYZ6 492 aa15.27■□□□□ 0.04
ARFGAP1-212ENST00000519604 HARSP12081 509 aaKnown RBP15.27■□□□□ 0.04
ARFGAP1-212ENST00000519604 SLC9A1P19634 815 aa15.27■□□□□ 0.04
ARFGAP1-212ENST00000519604 PMS2P54278 862 aa15.27■□□□□ 0.04
ARFGAP1-212ENST00000519604 TFAP4Q01664 338 aa15.27■□□□□ 0.04
ARFGAP1-212ENST00000519604 TAF11Q15544 211 aa15.27■□□□□ 0.04
ARFGAP1-212ENST00000519604 SOGA3Q5TF21 947 aa15.27■□□□□ 0.04
ARFGAP1-212ENST00000519604 ZNF384Q8TF68 577 aa15.27■□□□□ 0.04
ARFGAP1-212ENST00000519604 PNMA5Q96PV4 448 aa15.27■□□□□ 0.04
ARFGAP1-212ENST00000519604 FAM114A2Q9NRY5 505 aa15.27■□□□□ 0.04
ARFGAP1-212ENST00000519604 ATXN10Q9UBB4 475 aa15.27■□□□□ 0.04
ARFGAP1-212ENST00000519604 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.27■□□□□ 0.04
ARFGAP1-212ENST00000519604 USP17L3A6NCW0 530 aa15.27■□□□□ 0.03
ARFGAP1-212ENST00000519604 USP17L4A6NCW7 530 aa15.27■□□□□ 0.03
ARFGAP1-212ENST00000519604 STXBP3O00186 592 aa15.27■□□□□ 0.03
ARFGAP1-212ENST00000519604 FGFR4P22455 802 aa15.27■□□□□ 0.03
ARFGAP1-212ENST00000519604 TUBP50607 506 aa15.27■□□□□ 0.03
ARFGAP1-212ENST00000519604 FKBP3Q00688 224 aaKnown RBP15.27■□□□□ 0.03
ARFGAP1-212ENST00000519604 MKRN4PQ13434 485 aaPredicted RBP15.27■□□□□ 0.03
ARFGAP1-212ENST00000519604 FAM117BQ6P1L5 589 aa15.27■□□□□ 0.03
ARFGAP1-212ENST00000519604 USP17L1Q7RTZ2 530 aa15.27■□□□□ 0.03
ARFGAP1-212ENST00000519604 FBXO25Q8TCJ0 367 aa15.27■□□□□ 0.03
ARFGAP1-212ENST00000519604 CENPTQ96BT3 561 aa15.27■□□□□ 0.03
ARFGAP1-212ENST00000519604 SEMA4AQ9H3S1 761 aa15.27■□□□□ 0.03
ARFGAP1-212ENST00000519604 CCDC188H7C350 402 aa15.26■□□□□ 0.03
ARFGAP1-212ENST00000519604 TPPPO94811 219 aa15.26■□□□□ 0.03
ARFGAP1-212ENST00000519604 STARD3NLO95772 234 aa15.26■□□□□ 0.03
ARFGAP1-212ENST00000519604 HOXD12P35452 270 aa15.26■□□□□ 0.03
ARFGAP1-212ENST00000519604 IRF2BPLQ9H1B7 796 aa15.26■□□□□ 0.03
ARFGAP1-212ENST00000519604 NAGPAQ9UK23 515 aa15.26■□□□□ 0.03
ARFGAP1-212ENST00000519604 DUOX1Q9NRD9 1551 aa15.26■□□□□ 0.03
ARFGAP1-212ENST00000519604 SNX3O60493 162 aa15.26■□□□□ 0.03
ARFGAP1-212ENST00000519604 ZFXP17010 805 aaPredicted RBP15.26■□□□□ 0.03
ARFGAP1-212ENST00000519604 NFKBIAP25963 317 aa15.26■□□□□ 0.03
ARFGAP1-212ENST00000519604 EIF3BP55884 814 aaKnown RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms