RNA–Protein interactions for RNA: ENST00000518638.1

CCDC6-203, Transcript of coiled-coil domain containing 6, humanhuman

TSL 2

Gene CCDC6, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-203ENST00000518638 SPP2Q13103 211 aa7.52□□□□□ -1.21
CCDC6-203ENST00000518638 SNX17Q15036 470 aa7.52□□□□□ -1.21
CCDC6-203ENST00000518638 NKPD1Q17RQ9 610 aa7.52□□□□□ -1.21
CCDC6-203ENST00000518638 C9orf50Q5SZB4 431 aa7.52□□□□□ -1.21
CCDC6-203ENST00000518638 GPR142Q7Z601 462 aa7.52□□□□□ -1.21
CCDC6-203ENST00000518638 PLEKHH3Q7Z736 793 aa7.52□□□□□ -1.21
CCDC6-203ENST00000518638 MFSD4AQ8N468 514 aa7.52□□□□□ -1.21
CCDC6-203ENST00000518638 VGLL2Q8N8G2 317 aa7.52□□□□□ -1.21
CCDC6-203ENST00000518638 LPIN2Q92539 896 aa7.52□□□□□ -1.21
CCDC6-203ENST00000518638 USP6NLQ92738 828 aa7.52□□□□□ -1.21
CCDC6-203ENST00000518638 BADQ92934 168 aa7.52□□□□□ -1.21
CCDC6-203ENST00000518638 DIRC2Q96SL1 478 aa7.52□□□□□ -1.21
CCDC6-203ENST00000518638 NSUN3Q9H649 340 aaKnown RBP7.52□□□□□ -1.21
CCDC6-203ENST00000518638 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.52□□□□□ -1.21
CCDC6-203ENST00000518638 CAPN6Q9Y6Q1 641 aa7.52□□□□□ -1.21
CCDC6-203ENST00000518638 MUC3AQ02505 3323 aa7.52□□□□□ -1.21
CCDC6-203ENST00000518638 GAKO14976 1311 aa7.52□□□□□ -1.21
CCDC6-203ENST00000518638 IL16Q14005 1332 aa7.52□□□□□ -1.21
CCDC6-203ENST00000518638 TCAF2A6NFQ2 919 aa7.51□□□□□ -1.21
CCDC6-203ENST00000518638 PRR33A8MZF0 331 aa7.51□□□□□ -1.21
CCDC6-203ENST00000518638 UBOX5O94941 541 aa7.51□□□□□ -1.21
CCDC6-203ENST00000518638 ASNSP08243 561 aa7.51□□□□□ -1.21
CCDC6-203ENST00000518638 HOXA5P20719 270 aa7.51□□□□□ -1.21
CCDC6-203ENST00000518638 CNGA1P29973 690 aa7.51□□□□□ -1.21
CCDC6-203ENST00000518638 PRDX5P30044 214 aa7.51□□□□□ -1.21
CCDC6-203ENST00000518638 CCNFP41002 786 aa7.51□□□□□ -1.21
CCDC6-203ENST00000518638 NASPP49321 788 aaPredicted RBP7.51□□□□□ -1.21
CCDC6-203ENST00000518638 HERVK_113P62684 666 aa7.51□□□□□ -1.21
CCDC6-203ENST00000518638 EPHA10Q5JZY3 1008 aa7.51□□□□□ -1.21
CCDC6-203ENST00000518638 SLC39A5Q6ZMH5 540 aa7.51□□□□□ -1.21
CCDC6-203ENST00000518638 DZIP1Q86YF9 867 aaKnown RBP7.51□□□□□ -1.21
CCDC6-203ENST00000518638 USP38Q8NB14 1042 aa7.51□□□□□ -1.21
CCDC6-203ENST00000518638 RNF141Q8WVD5 230 aa7.51□□□□□ -1.21
CCDC6-203ENST00000518638 TIFAQ96CG3 184 aa7.51□□□□□ -1.21
CCDC6-203ENST00000518638 EDC3Q96F86 508 aaKnown RBP7.51□□□□□ -1.21
CCDC6-203ENST00000518638 TINF2Q9BSI4 451 aa7.51□□□□□ -1.21
CCDC6-203ENST00000518638 PUS3Q9BZE2 481 aaKnown RBP7.51□□□□□ -1.21
CCDC6-203ENST00000518638 CAPN10Q9HC96 672 aa7.51□□□□□ -1.21
CCDC6-203ENST00000518638 PDLIM7Q9NR12 457 aa7.51□□□□□ -1.21
CCDC6-203ENST00000518638 HERC5Q9UII4 1024 aaKnown RBP7.51□□□□□ -1.21
CCDC6-203ENST00000518638 DENND2AQ9ULE3 1009 aa7.51□□□□□ -1.21
CCDC6-203ENST00000518638 DDTLA6NHG4 134 aaPredicted RBP7.5□□□□□ -1.21
CCDC6-203ENST00000518638 SLC15A5A6NIM6 579 aa7.5□□□□□ -1.21
CCDC6-203ENST00000518638 HOXC6P09630 235 aa7.5□□□□□ -1.21
CCDC6-203ENST00000518638 FGFR2P21802 821 aa7.5□□□□□ -1.21
CCDC6-203ENST00000518638 GBP1P32455 592 aa7.5□□□□□ -1.21
CCDC6-203ENST00000518638 CLCN7P51798 805 aa7.5□□□□□ -1.21
CCDC6-203ENST00000518638 BACE1P56817 501 aa7.5□□□□□ -1.21
CCDC6-203ENST00000518638 FPGSQ05932 587 aa7.5□□□□□ -1.21
CCDC6-203ENST00000518638 PICALMQ13492 652 aa7.5□□□□□ -1.21
CCDC6-203ENST00000518638 GNL2Q13823 731 aaKnown RBP7.5□□□□□ -1.21
CCDC6-203ENST00000518638 RABL6Q3YEC7 729 aaPredicted RBP7.5□□□□□ -1.21
CCDC6-203ENST00000518638 SPTY2D1Q68D10 685 aaPredicted RBP7.5□□□□□ -1.21
CCDC6-203ENST00000518638 ATG14Q6ZNE5 492 aa7.5□□□□□ -1.21
CCDC6-203ENST00000518638 TAB3Q8N5C8 712 aaPredicted RBP7.5□□□□□ -1.21
CCDC6-203ENST00000518638 TSR2Q969E8 191 aaKnown RBP7.5□□□□□ -1.21
CCDC6-203ENST00000518638 RELTQ969Z4 430 aa7.5□□□□□ -1.21
CCDC6-203ENST00000518638 KREMEN1Q96MU8 473 aa7.5□□□□□ -1.21
CCDC6-203ENST00000518638 TM9SF2Q99805 663 aa7.5□□□□□ -1.21
CCDC6-203ENST00000518638 EYSQ5T1H1 3165 aa7.5□□□□□ -1.21
CCDC6-203ENST00000518638 PDS5AQ29RF7 1337 aaKnown RBP7.5□□□□□ -1.21
CCDC6-203ENST00000518638 CDH23Q9H251 3354 aa7.5□□□□□ -1.21
CCDC6-203ENST00000518638 CBX7O95931 251 aa7.49□□□□□ -1.21
CCDC6-203ENST00000518638 CLTBP09497 229 aa7.49□□□□□ -1.21
CCDC6-203ENST00000518638 ATF4P18848 351 aaPredicted RBP7.49□□□□□ -1.21
CCDC6-203ENST00000518638 POLR2BP30876 1174 aaKnown RBP7.49□□□□□ -1.21
CCDC6-203ENST00000518638 CCL14Q16627 93 aa7.49□□□□□ -1.21
CCDC6-203ENST00000518638 TRIM60Q495X7 471 aa7.49□□□□□ -1.21
CCDC6-203ENST00000518638 LRRC24Q50LG9 513 aa7.49□□□□□ -1.21
CCDC6-203ENST00000518638 NAALADL2Q58DX5 795 aa7.49□□□□□ -1.21
CCDC6-203ENST00000518638 TMEM31Q5JXX7 168 aa7.49□□□□□ -1.21
CCDC6-203ENST00000518638 FBXW10Q5XX13 1052 aa7.49□□□□□ -1.21
CCDC6-203ENST00000518638 CCDC81Q6ZN84 652 aa7.49□□□□□ -1.21
CCDC6-203ENST00000518638 LSRQ86X29 649 aaPredicted RBP7.49□□□□□ -1.21
CCDC6-203ENST00000518638 ZFPM1Q8IX07 1006 aa7.49□□□□□ -1.21
CCDC6-203ENST00000518638 PIWIL2Q8TC59 973 aaKnown RBP7.49□□□□□ -1.21
CCDC6-203ENST00000518638 UBXN4Q92575 508 aa7.49□□□□□ -1.21
CCDC6-203ENST00000518638 Q96M66 194 aa7.49□□□□□ -1.21
CCDC6-203ENST00000518638 ASPNQ9BXN1 380 aa7.49□□□□□ -1.21
CCDC6-203ENST00000518638 SRRTQ9BXP5 876 aaKnown RBP7.49□□□□□ -1.21
CCDC6-203ENST00000518638 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.49□□□□□ -1.21
CCDC6-203ENST00000518638 BICC1Q9H694 974 aaKnown RBP7.49□□□□□ -1.21
CCDC6-203ENST00000518638 SLC5A4Q9NY91 659 aa7.49□□□□□ -1.21
CCDC6-203ENST00000518638 STRIP2Q9ULQ0 834 aa7.49□□□□□ -1.21
CCDC6-203ENST00000518638 RABGAP1Q9Y3P9 1069 aa7.49□□□□□ -1.21
CCDC6-203ENST00000518638 ZNF236Q9UL36 1845 aa7.49□□□□□ -1.21
CCDC6-203ENST00000518638 KIAA0355O15063 1070 aa7.48□□□□□ -1.21
CCDC6-203ENST00000518638 SEPT4O43236 478 aa7.48□□□□□ -1.21
CCDC6-203ENST00000518638 MED14OSP0DP75 135 aa7.48□□□□□ -1.21
CCDC6-203ENST00000518638 CYBAP13498 195 aa7.48□□□□□ -1.21
CCDC6-203ENST00000518638 BTDP43251 543 aa7.48□□□□□ -1.21
CCDC6-203ENST00000518638 GIPRP48546 466 aa7.48□□□□□ -1.21
CCDC6-203ENST00000518638 GSTO1P78417 241 aa7.48□□□□□ -1.21
CCDC6-203ENST00000518638 TNK2Q07912 1038 aa7.48□□□□□ -1.21
CCDC6-203ENST00000518638 GRB14Q14449 540 aa7.48□□□□□ -1.21
CCDC6-203ENST00000518638 RAB30Q15771 203 aa7.48□□□□□ -1.21
CCDC6-203ENST00000518638 OLFML2BQ68BL8 750 aa7.48□□□□□ -1.21
CCDC6-203ENST00000518638 VWCEQ96DN2 955 aa7.48□□□□□ -1.21
CCDC6-203ENST00000518638 SUCLG2Q96I99 432 aa7.48□□□□□ -1.21
CCDC6-203ENST00000518638 C20orf173Q96LM9 149 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms