RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 IRX3P78415 501 aaPredicted RBP3.17□□□□□ -1.9
SKP1-204ENST00000517691 PABPC4Q13310 644 aaKnown RBP eCLIP3.17□□□□□ -1.98e-43■■□□□ 12.4
SKP1-204ENST00000517691 CBX2Q14781 532 aaPredicted RBP3.17□□□□□ -1.9
SKP1-204ENST00000517691 DDR2Q16832 855 aa3.17□□□□□ -1.9
SKP1-204ENST00000517691 CT47A1Q5JQC4 288 aaPredicted RBP3.17□□□□□ -1.9
SKP1-204ENST00000517691 SNAP47Q5SQN1 464 aa3.17□□□□□ -1.9
SKP1-204ENST00000517691 TREML2Q5T2D2 321 aa3.17□□□□□ -1.9
SKP1-204ENST00000517691 ARMCX6Q7L4S7 300 aa3.17□□□□□ -1.9
SKP1-204ENST00000517691 PRRT2Q7Z6L0 340 aaPredicted RBP3.17□□□□□ -1.9
SKP1-204ENST00000517691 RALYLQ86SE5 291 aaKnown RBP3.17□□□□□ -1.9
SKP1-204ENST00000517691 ANKRD23Q86SG2 305 aa3.17□□□□□ -1.9
SKP1-204ENST00000517691 SYT9Q86SS6 491 aa3.17□□□□□ -1.9
SKP1-204ENST00000517691 TBC1D10CQ8IV04 446 aa3.17□□□□□ -1.9
SKP1-204ENST00000517691 TRIM42Q8IWZ5 723 aa3.17□□□□□ -1.9
SKP1-204ENST00000517691 ANKRD42Q8N9B4 389 aa3.17□□□□□ -1.9
SKP1-204ENST00000517691 SMCR8Q8TEV9 937 aaPredicted RBP3.17□□□□□ -1.9
SKP1-204ENST00000517691 BSNDQ8WZ55 320 aa3.17□□□□□ -1.9
SKP1-204ENST00000517691 ESR2Q92731 530 aa3.17□□□□□ -1.9
SKP1-204ENST00000517691 MAP4K1Q92918 833 aa3.17□□□□□ -1.9
SKP1-204ENST00000517691 SHDQ96IW2 340 aa3.17□□□□□ -1.9
SKP1-204ENST00000517691 LRRC3Q9BY71 257 aa3.17□□□□□ -1.9
SKP1-204ENST00000517691 KIAA1683Q9H0B3 1180 aa3.17□□□□□ -1.9
SKP1-204ENST00000517691 CDH19Q9H159 772 aa3.17□□□□□ -1.9
SKP1-204ENST00000517691 IGFLR1Q9H665 355 aa3.17□□□□□ -1.9
SKP1-204ENST00000517691 SH2D4AQ9H788 454 aa3.17□□□□□ -1.9
SKP1-204ENST00000517691 NGRNQ9NPE2 291 aaKnown RBP3.17□□□□□ -1.9
SKP1-204ENST00000517691 TMEM39AQ9NV64 488 aa3.17□□□□□ -1.9
SKP1-204ENST00000517691 SAGE1Q9NXZ1 904 aa3.17□□□□□ -1.9
SKP1-204ENST00000517691 PPT2Q9UMR5 302 aa3.17□□□□□ -1.9
SKP1-204ENST00000517691 AGTPBP1Q9UPW5 1226 aa3.17□□□□□ -1.9
SKP1-204ENST00000517691 RBM8AQ9Y5S9 174 aaKnown RBP3.17□□□□□ -1.9
SKP1-204ENST00000517691 A0A1W2PRG0 241 aa3.17□□□□□ -1.9
SKP1-204ENST00000517691 ERICH2A1L162 156 aa3.17□□□□□ -1.9
SKP1-204ENST00000517691 GOLGA6CA6NDK9 693 aa3.17□□□□□ -1.9
SKP1-204ENST00000517691 GOLGA6BA6NDN3 693 aa3.17□□□□□ -1.9
SKP1-204ENST00000517691 B4E1Z4 1266 aa3.17□□□□□ -1.9
SKP1-204ENST00000517691 C9orf172C9J069 976 aa3.17□□□□□ -1.9
SKP1-204ENST00000517691 E7EWF7 191 aa3.17□□□□□ -1.9
SKP1-204ENST00000517691 TLR3O15455 904 aaKnown RBP3.17□□□□□ -1.9
SKP1-204ENST00000517691 ORC4O43929 436 aa3.17□□□□□ -1.9
SKP1-204ENST00000517691 HIP1RO75146 1068 aa3.17□□□□□ -1.9
SKP1-204ENST00000517691 TCEA3O75764 348 aa3.17□□□□□ -1.9
SKP1-204ENST00000517691 REC8O95072 547 aa3.17□□□□□ -1.9
SKP1-204ENST00000517691 ZRANB2O95218 330 aaKnown RBP eCLIP3.17□□□□□ -1.9
SKP1-204ENST00000517691 TTLL1O95922 423 aa3.17□□□□□ -1.9
SKP1-204ENST00000517691 B3GALT4O96024 378 aa3.17□□□□□ -1.9
SKP1-204ENST00000517691 CYP21A2P08686 494 aa3.17□□□□□ -1.9
SKP1-204ENST00000517691 GOLGA6DP0CG33 693 aa3.17□□□□□ -1.9
SKP1-204ENST00000517691 VDRP11473 427 aa3.17□□□□□ -1.9
SKP1-204ENST00000517691 PCP11498 1178 aaKnown RBP3.17□□□□□ -1.9
SKP1-204ENST00000517691 ZKSCAN1P17029 563 aaPredicted RBP3.17□□□□□ -1.9
SKP1-204ENST00000517691 IKQ13123 557 aaPredicted RBP3.17□□□□□ -1.9
SKP1-204ENST00000517691 CRHR2Q13324 411 aa3.17□□□□□ -1.9
SKP1-204ENST00000517691 MTMR1Q13613 665 aa3.17□□□□□ -1.9
SKP1-204ENST00000517691 MOGSQ13724 837 aa3.17□□□□□ -1.9
SKP1-204ENST00000517691 CCDC96Q2M329 555 aa3.17□□□□□ -1.9
SKP1-204ENST00000517691 MTERF2Q49AM1 385 aa3.17□□□□□ -1.9
SKP1-204ENST00000517691 SEZ6Q53EL9 994 aa3.17□□□□□ -1.9
SKP1-204ENST00000517691 ZNF468Q5VIY5 522 aaPredicted RBP3.17□□□□□ -1.9
SKP1-204ENST00000517691 ARMC3Q5W041 872 aa3.17□□□□□ -1.9
SKP1-204ENST00000517691 CREB3L3Q68CJ9 461 aa3.17□□□□□ -1.9
SKP1-204ENST00000517691 CCDC70Q6NSX1 233 aa3.17□□□□□ -1.9
SKP1-204ENST00000517691 C8orf86Q6ZUL3 223 aa3.17□□□□□ -1.9
SKP1-204ENST00000517691 LHFPL2Q6ZUX7 228 aa3.17□□□□□ -1.9
SKP1-204ENST00000517691 STRA8Q7Z7C7 330 aa3.17□□□□□ -1.9
SKP1-204ENST00000517691 RNF180Q86T96 592 aa3.17□□□□□ -1.9
SKP1-204ENST00000517691 FCHSD1Q86WN1 690 aa3.17□□□□□ -1.9
SKP1-204ENST00000517691 IQCA1Q86XH1 822 aa3.17□□□□□ -1.9
SKP1-204ENST00000517691 SIAH1Q8IUQ4 282 aa3.17□□□□□ -1.9
SKP1-204ENST00000517691 LRRC47Q8N1G4 583 aaKnown RBP3.17□□□□□ -1.9
SKP1-204ENST00000517691 ATL2Q8NHH9 583 aa3.17□□□□□ -1.9
SKP1-204ENST00000517691 GRIN3AQ8TCU5 1115 aa3.17□□□□□ -1.9
SKP1-204ENST00000517691 THAP3Q8WTV1 239 aaPredicted RBP3.17□□□□□ -1.9
SKP1-204ENST00000517691 GATAD2BQ8WXI9 593 aa3.17□□□□□ -1.9
SKP1-204ENST00000517691 NKD1Q969G9 470 aa3.17□□□□□ -1.9
SKP1-204ENST00000517691 TRIM11Q96F44 468 aa3.17□□□□□ -1.9
SKP1-204ENST00000517691 ASIC4Q96FT7 647 aa3.17□□□□□ -1.9
SKP1-204ENST00000517691 CEP95Q96GE4 821 aa3.17□□□□□ -1.9
SKP1-204ENST00000517691 PARK7Q99497 189 aaKnown RBP3.17□□□□□ -1.9
SKP1-204ENST00000517691 P2RX7Q99572 595 aaKnown RBP3.17□□□□□ -1.9
SKP1-204ENST00000517691 MDFIQ99750 246 aa3.17□□□□□ -1.9
SKP1-204ENST00000517691 UBAC1Q9BSL1 405 aa3.17□□□□□ -1.9
SKP1-204ENST00000517691 KRT23Q9C075 422 aa3.17□□□□□ -1.9
SKP1-204ENST00000517691 ADAM19Q9H013 955 aa3.17□□□□□ -1.9
SKP1-204ENST00000517691 LSG1Q9H089 658 aaKnown RBP3.17□□□□□ -1.9
SKP1-204ENST00000517691 CLEC4MQ9H2X3 399 aaPredicted RBP3.17□□□□□ -1.9
SKP1-204ENST00000517691 R3HDMLQ9H3Y0 253 aa3.17□□□□□ -1.9
SKP1-204ENST00000517691 RPAP3Q9H6T3 665 aaPredicted RBP3.17□□□□□ -1.9
SKP1-204ENST00000517691 CAAP1Q9H8G2 361 aa3.17□□□□□ -1.9
SKP1-204ENST00000517691 CNNM2Q9H8M5 875 aa3.17□□□□□ -1.9
SKP1-204ENST00000517691 GOLGA6AQ9NYA3 693 aa3.17□□□□□ -1.9
SKP1-204ENST00000517691 MTMR4Q9NYA4 1195 aa3.17□□□□□ -1.9
SKP1-204ENST00000517691 NYAP2Q9P242 653 aa3.17□□□□□ -1.9
SKP1-204ENST00000517691 GPN3Q9UHW5 284 aaPredicted RBP3.17□□□□□ -1.9
SKP1-204ENST00000517691 PUF60Q9UHX1 559 aaKnown RBP3.17□□□□□ -1.9
SKP1-204ENST00000517691 CPA4Q9UI42 421 aa3.17□□□□□ -1.9
SKP1-204ENST00000517691 MCM8Q9UJA3 840 aa3.17□□□□□ -1.9
SKP1-204ENST00000517691 STRIP2Q9ULQ0 834 aa3.17□□□□□ -1.9
SKP1-204ENST00000517691 SOX13Q9UN79 622 aa3.17□□□□□ -1.9
SKP1-204ENST00000517691 MAPK8IP1Q9UQF2 711 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms