RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 K7ERI5 159 aa11.66□□□□□ -0.54
PCDHGA1-202ENST00000517417 STAT3P40763 770 aa11.66□□□□□ -0.54
PCDHGA1-202ENST00000517417 C12orf60Q5U649 245 aa11.66□□□□□ -0.54
PCDHGA1-202ENST00000517417 CCDC13Q8IYE1 715 aa11.66□□□□□ -0.54
PCDHGA1-202ENST00000517417 RTKN2Q8IZC4 609 aa11.66□□□□□ -0.54
PCDHGA1-202ENST00000517417 HVCN1Q96D96 273 aa11.66□□□□□ -0.54
PCDHGA1-202ENST00000517417 CYFIP2Q96F07 1278 aa11.66□□□□□ -0.54
PCDHGA1-202ENST00000517417 RILPQ96NA2 401 aa11.66□□□□□ -0.54
PCDHGA1-202ENST00000517417 ZNF277Q9NRM2 450 aaPredicted RBP11.66□□□□□ -0.54
PCDHGA1-202ENST00000517417 AMACRQ9UHK6 382 aa11.66□□□□□ -0.54
PCDHGA1-202ENST00000517417 CD2APQ9Y5K6 639 aa11.66□□□□□ -0.54
PCDHGA1-202ENST00000517417 TACC3Q9Y6A5 838 aa11.66□□□□□ -0.54
PCDHGA1-202ENST00000517417 POC1B-GALNT4F8VUJ3 575 aa11.65□□□□□ -0.54
PCDHGA1-202ENST00000517417 DR1Q01658 176 aa11.65□□□□□ -0.54
PCDHGA1-202ENST00000517417 TTMPQ5BVD1 217 aa11.65□□□□□ -0.54
PCDHGA1-202ENST00000517417 RNF207Q6ZRF8 634 aa11.65□□□□□ -0.54
PCDHGA1-202ENST00000517417 PARP9Q8IXQ6 854 aa11.65□□□□□ -0.54
PCDHGA1-202ENST00000517417 ADGRF4Q8IZF3 695 aa11.65□□□□□ -0.54
PCDHGA1-202ENST00000517417 NME8Q8N427 588 aa11.65□□□□□ -0.54
PCDHGA1-202ENST00000517417 PPFIBP2Q8ND30 876 aa11.65□□□□□ -0.54
PCDHGA1-202ENST00000517417 NEK9Q8TD19 979 aa11.65□□□□□ -0.54
PCDHGA1-202ENST00000517417 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.65□□□□□ -0.54
PCDHGA1-202ENST00000517417 YY1AP1Q9H869 796 aa11.65□□□□□ -0.54
PCDHGA1-202ENST00000517417 SEPT10Q9P0V9 454 aa11.65□□□□□ -0.54
PCDHGA1-202ENST00000517417 MAD1L1Q9Y6D9 718 aa11.65□□□□□ -0.54
PCDHGA1-202ENST00000517417 H7C0C1 242 aa11.65□□□□□ -0.54
PCDHGA1-202ENST00000517417 ZBTB7AO95365 584 aa11.65□□□□□ -0.54
PCDHGA1-202ENST00000517417 FAM107AO95990 144 aa11.65□□□□□ -0.54
PCDHGA1-202ENST00000517417 ATP5OP48047 213 aa11.65□□□□□ -0.54
PCDHGA1-202ENST00000517417 SPP2Q13103 211 aa11.65□□□□□ -0.54
PCDHGA1-202ENST00000517417 PSMD6Q15008 389 aa11.65□□□□□ -0.54
PCDHGA1-202ENST00000517417 NAB2Q15742 525 aa11.65□□□□□ -0.54
PCDHGA1-202ENST00000517417 CYP4F22Q6NT55 531 aa11.65□□□□□ -0.54
PCDHGA1-202ENST00000517417 VPS52Q8N1B4 723 aa11.65□□□□□ -0.54
PCDHGA1-202ENST00000517417 MARCH10Q8NA82 808 aaPredicted RBP11.65□□□□□ -0.54
PCDHGA1-202ENST00000517417 NEDD1Q8NHV4 660 aa11.65□□□□□ -0.54
PCDHGA1-202ENST00000517417 MYCBPAPQ8TBZ2 947 aa11.65□□□□□ -0.54
PCDHGA1-202ENST00000517417 SLC16A10Q8TF71 515 aa11.65□□□□□ -0.54
PCDHGA1-202ENST00000517417 MTMR8Q96EF0 704 aa11.65□□□□□ -0.54
PCDHGA1-202ENST00000517417 CDHR1Q96JP9 859 aa11.65□□□□□ -0.54
PCDHGA1-202ENST00000517417 ZMYND12Q9H0C1 365 aa11.65□□□□□ -0.54
PCDHGA1-202ENST00000517417 GOLPH3Q9H4A6 298 aa11.65□□□□□ -0.54
PCDHGA1-202ENST00000517417 NUB1Q9Y5A7 615 aa11.65□□□□□ -0.54
PCDHGA1-202ENST00000517417 ZHX2Q9Y6X8 837 aa11.65□□□□□ -0.54
PCDHGA1-202ENST00000517417 MMEP08473 750 aa11.65□□□□□ -0.54
PCDHGA1-202ENST00000517417 VEGFAP15692 232 aaPredicted RBP11.65□□□□□ -0.54
PCDHGA1-202ENST00000517417 HOXA7P31268 230 aaPredicted RBP11.65□□□□□ -0.54
PCDHGA1-202ENST00000517417 EIF3BP55884 814 aaKnown RBP11.65□□□□□ -0.54
PCDHGA1-202ENST00000517417 DYNLT1P63172 113 aa11.65□□□□□ -0.54
PCDHGA1-202ENST00000517417 GABPAQ06546 454 aa11.65□□□□□ -0.54
PCDHGA1-202ENST00000517417 ZNF394Q53GI3 561 aa11.65□□□□□ -0.54
PCDHGA1-202ENST00000517417 MIS18BP1Q6P0N0 1132 aa11.65□□□□□ -0.54
PCDHGA1-202ENST00000517417 IRF2BP1Q8IU81 584 aa11.65□□□□□ -0.54
PCDHGA1-202ENST00000517417 GRK7Q8WTQ7 553 aa11.65□□□□□ -0.54
PCDHGA1-202ENST00000517417 NLRP4Q96MN2 994 aa11.65□□□□□ -0.54
PCDHGA1-202ENST00000517417 MTRQ99707 1265 aa11.65□□□□□ -0.54
PCDHGA1-202ENST00000517417 CD248Q9HCU0 757 aa11.65□□□□□ -0.54
PCDHGA1-202ENST00000517417 HAUS2Q9NVX0 235 aa11.65□□□□□ -0.54
PCDHGA1-202ENST00000517417 CRYBG1Q9Y4K1 1723 aa11.65□□□□□ -0.54
PCDHGA1-202ENST00000517417 TUBGCP6Q96RT7 1819 aa11.65□□□□□ -0.55
PCDHGA1-202ENST00000517417 PASKQ96RG2 1323 aa11.65□□□□□ -0.55
PCDHGA1-202ENST00000517417 SART1O43290 800 aaKnown RBP11.64□□□□□ -0.55
PCDHGA1-202ENST00000517417 CRCPO75575 148 aa11.64□□□□□ -0.55
PCDHGA1-202ENST00000517417 RC3H1Q5TC82 1133 aaKnown RBP11.64□□□□□ -0.55
PCDHGA1-202ENST00000517417 USP38Q8NB14 1042 aa11.64□□□□□ -0.55
PCDHGA1-202ENST00000517417 I3L4J1 428 aa11.64□□□□□ -0.55
PCDHGA1-202ENST00000517417 FAM153BP0C7A2 387 aa11.64□□□□□ -0.55
PCDHGA1-202ENST00000517417 TRIP13Q15645 432 aaPredicted RBP11.64□□□□□ -0.55
PCDHGA1-202ENST00000517417 FAM153CQ494X1 144 aa11.64□□□□□ -0.55
PCDHGA1-202ENST00000517417 SUGP1Q8IWZ8 645 aaKnown RBP11.64□□□□□ -0.55
PCDHGA1-202ENST00000517417 P3H4Q92791 437 aa11.64□□□□□ -0.55
PCDHGA1-202ENST00000517417 FAM153AQ9UHL3 310 aa11.64□□□□□ -0.55
PCDHGA1-202ENST00000517417 AP3B2Q13367 1082 aa11.64□□□□□ -0.55
PCDHGA1-202ENST00000517417 MTMR1Q13613 665 aa11.64□□□□□ -0.55
PCDHGA1-202ENST00000517417 SPOUT1Q5T280 376 aaKnown RBP11.64□□□□□ -0.55
PCDHGA1-202ENST00000517417 RCSD1Q6JBY9 416 aa11.64□□□□□ -0.55
PCDHGA1-202ENST00000517417 LRIG3Q6UXM1 1119 aa11.64□□□□□ -0.55
PCDHGA1-202ENST00000517417 TBC1D1Q86TI0 1168 aaPredicted RBP11.64□□□□□ -0.55
PCDHGA1-202ENST00000517417 RPAINQ86UA6 219 aa11.64□□□□□ -0.55
PCDHGA1-202ENST00000517417 CCT6BQ92526 530 aa11.64□□□□□ -0.55
PCDHGA1-202ENST00000517417 ELAC2Q9BQ52 826 aaKnown RBP11.64□□□□□ -0.55
PCDHGA1-202ENST00000517417 TLR10Q9BXR5 811 aa11.64□□□□□ -0.55
PCDHGA1-202ENST00000517417 CAMTA2O94983 1202 aa11.64□□□□□ -0.55
PCDHGA1-202ENST00000517417 SAT1P21673 171 aa11.64□□□□□ -0.55
PCDHGA1-202ENST00000517417 FECHP22830 423 aa11.64□□□□□ -0.55
PCDHGA1-202ENST00000517417 CCND2P30279 289 aa11.64□□□□□ -0.55
PCDHGA1-202ENST00000517417 GCLMP48507 274 aa11.64□□□□□ -0.55
PCDHGA1-202ENST00000517417 TFDP1Q14186 410 aa11.64□□□□□ -0.55
PCDHGA1-202ENST00000517417 SBK1Q52WX2 424 aa11.64□□□□□ -0.55
PCDHGA1-202ENST00000517417 SGO2Q562F6 1265 aa11.64□□□□□ -0.55
PCDHGA1-202ENST00000517417 KLHDC7AQ5VTJ3 777 aa11.64□□□□□ -0.55
PCDHGA1-202ENST00000517417 SCARA5Q6ZMJ2 495 aa11.64□□□□□ -0.55
PCDHGA1-202ENST00000517417 THNSL1Q8IYQ7 743 aa11.64□□□□□ -0.55
PCDHGA1-202ENST00000517417 SH2D3AQ9BRG2 576 aa11.64□□□□□ -0.55
PCDHGA1-202ENST00000517417 PPP1R12CQ9BZL4 782 aa11.64□□□□□ -0.55
PCDHGA1-202ENST00000517417 GEMIN8Q9NWZ8 242 aaKnown RBP11.64□□□□□ -0.55
PCDHGA1-202ENST00000517417 SNX24Q9Y343 169 aa11.64□□□□□ -0.55
PCDHGA1-202ENST00000517417 SGK1O00141 431 aa11.63□□□□□ -0.55
PCDHGA1-202ENST00000517417 CHRNA5P30532 468 aa11.63□□□□□ -0.55
PCDHGA1-202ENST00000517417 CCDC62Q6P9F0 684 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms