RNA–Protein interactions for RNA: ENST00000516133.1

SCARNA16.1-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 183 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.1-201ENST00000516133 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.48□□□□□ -0.41
SCARNA16.1-201ENST00000516133 PPM1EQ8WY54 764 aa12.48□□□□□ -0.41
SCARNA16.1-201ENST00000516133 CLP1Q92989 425 aaKnown RBP12.48□□□□□ -0.41
SCARNA16.1-201ENST00000516133 ATP6V0A4Q9HBG4 840 aa12.48□□□□□ -0.41
SCARNA16.1-201ENST00000516133 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.48□□□□□ -0.41
SCARNA16.1-201ENST00000516133 UNC80Q8N2C7 3258 aa12.48□□□□□ -0.41
SCARNA16.1-201ENST00000516133 A0A0U1RQF3 1178 aa12.47□□□□□ -0.41
SCARNA16.1-201ENST00000516133 H3BNC9 293 aa12.47□□□□□ -0.41
SCARNA16.1-201ENST00000516133 HOXA2O43364 376 aa12.47□□□□□ -0.41
SCARNA16.1-201ENST00000516133 MED24O75448 989 aa12.47□□□□□ -0.41
SCARNA16.1-201ENST00000516133 CSDE1O75534 798 aaKnown RBP12.47□□□□□ -0.41
SCARNA16.1-201ENST00000516133 EOMESO95936 686 aa12.47□□□□□ -0.41
SCARNA16.1-201ENST00000516133 SKIP12755 728 aa12.47□□□□□ -0.41
SCARNA16.1-201ENST00000516133 NCBP1Q09161 790 aaKnown RBP12.47□□□□□ -0.41
SCARNA16.1-201ENST00000516133 TFDP1Q14186 410 aa12.47□□□□□ -0.41
SCARNA16.1-201ENST00000516133 PCBP1Q15365 356 aaKnown RBP eCLIP12.47□□□□□ -0.41
SCARNA16.1-201ENST00000516133 CCDC85BQ15834 202 aaPredicted RBP12.47□□□□□ -0.41
SCARNA16.1-201ENST00000516133 PTPROQ16827 1216 aa12.47□□□□□ -0.41
SCARNA16.1-201ENST00000516133 CATSPER4Q7RTX7 472 aa12.47□□□□□ -0.41
SCARNA16.1-201ENST00000516133 BRAPQ7Z569 592 aa12.47□□□□□ -0.41
SCARNA16.1-201ENST00000516133 IGSF22Q8N9C0 903 aa12.47□□□□□ -0.41
SCARNA16.1-201ENST00000516133 TRAIPQ9BWF2 469 aa12.47□□□□□ -0.41
SCARNA16.1-201ENST00000516133 PLVAPQ9BX97 442 aa12.47□□□□□ -0.41
SCARNA16.1-201ENST00000516133 IFT122Q9HBG6 1241 aa12.47□□□□□ -0.41
SCARNA16.1-201ENST00000516133 NCOR1O75376 2440 aa12.47□□□□□ -0.41
SCARNA16.1-201ENST00000516133 COL4A6Q14031 1691 aa12.46□□□□□ -0.41
SCARNA16.1-201ENST00000516133 C5orf67F2Z3F1 127 aa12.46□□□□□ -0.41
SCARNA16.1-201ENST00000516133 K7ELQ4 463 aaPredicted RBP12.46□□□□□ -0.41
SCARNA16.1-201ENST00000516133 IBSPP21815 317 aaPredicted RBP12.46□□□□□ -0.41
SCARNA16.1-201ENST00000516133 FGFR4P22455 802 aa12.46□□□□□ -0.41
SCARNA16.1-201ENST00000516133 CTNNB1P35222 781 aa12.46□□□□□ -0.41
SCARNA16.1-201ENST00000516133 ARL2P36404 184 aa12.46□□□□□ -0.41
SCARNA16.1-201ENST00000516133 CCT6AP40227 531 aaKnown RBP12.46□□□□□ -0.41
SCARNA16.1-201ENST00000516133 PHKA2P46019 1235 aa12.46□□□□□ -0.41
SCARNA16.1-201ENST00000516133 GPM6BQ13491 265 aa12.46□□□□□ -0.41
SCARNA16.1-201ENST00000516133 NAALADL2Q58DX5 795 aa12.46□□□□□ -0.41
SCARNA16.1-201ENST00000516133 KRT79Q5XKE5 535 aa12.46□□□□□ -0.41
SCARNA16.1-201ENST00000516133 ARL6IP4Q66PJ3 421 aaKnown RBP12.46□□□□□ -0.41
SCARNA16.1-201ENST00000516133 MICALL1Q8N3F8 863 aa12.46□□□□□ -0.41
SCARNA16.1-201ENST00000516133 RNF149Q8NC42 400 aa12.46□□□□□ -0.41
SCARNA16.1-201ENST00000516133 MCPH1Q8NEM0 835 aa12.46□□□□□ -0.41
SCARNA16.1-201ENST00000516133 GDPD5Q8WTR4 605 aa12.46□□□□□ -0.41
SCARNA16.1-201ENST00000516133 C11orf84Q9BUA3 381 aaPredicted RBP12.46□□□□□ -0.41
SCARNA16.1-201ENST00000516133 XPNPEP1Q9NQW7 623 aa12.46□□□□□ -0.41
SCARNA16.1-201ENST00000516133 BMP2KQ9NSY1 1161 aaPredicted RBP12.46□□□□□ -0.41
SCARNA16.1-201ENST00000516133 A0A087WWV3 80 aa12.45□□□□□ -0.42
SCARNA16.1-201ENST00000516133 ARHGEF35A5YM69 484 aa12.45□□□□□ -0.42
SCARNA16.1-201ENST00000516133 BMP15O95972 392 aa12.45□□□□□ -0.42
SCARNA16.1-201ENST00000516133 PTENP60484 403 aa12.45□□□□□ -0.42
SCARNA16.1-201ENST00000516133 ATP2C1P98194 919 aaPredicted RBP12.45□□□□□ -0.42
SCARNA16.1-201ENST00000516133 FAM102BQ5T8I3 360 aa12.45□□□□□ -0.42
SCARNA16.1-201ENST00000516133 TWF2Q6IBS0 349 aaKnown RBP12.45□□□□□ -0.42
SCARNA16.1-201ENST00000516133 POTEGQ6S5H5 508 aa12.45□□□□□ -0.42
SCARNA16.1-201ENST00000516133 ECHDC2Q86YB7 292 aa12.45□□□□□ -0.42
SCARNA16.1-201ENST00000516133 ABI1Q8IZP0 508 aa12.45□□□□□ -0.42
SCARNA16.1-201ENST00000516133 KCTD17Q8N5Z5 321 aa12.45□□□□□ -0.42
SCARNA16.1-201ENST00000516133 RSPH1Q8WYR4 309 aa12.45□□□□□ -0.42
SCARNA16.1-201ENST00000516133 P2RX5Q93086 422 aa12.45□□□□□ -0.42
SCARNA16.1-201ENST00000516133 SNX21Q969T3 373 aa12.45□□□□□ -0.42
SCARNA16.1-201ENST00000516133 MRPL38Q96DV4 380 aaKnown RBP12.45□□□□□ -0.42
SCARNA16.1-201ENST00000516133 NFKBIZQ9BYH8 718 aa12.45□□□□□ -0.42
SCARNA16.1-201ENST00000516133 TMEM117Q9H0C3 514 aa12.45□□□□□ -0.42
SCARNA16.1-201ENST00000516133 AAASQ9NRG9 546 aa12.45□□□□□ -0.42
SCARNA16.1-201ENST00000516133 KIAA1024Q9UPX6 916 aa12.45□□□□□ -0.42
SCARNA16.1-201ENST00000516133 DNM3Q9UQ16 869 aa12.45□□□□□ -0.42
SCARNA16.1-201ENST00000516133 PIN4Q9Y237 131 aaKnown RBP12.45□□□□□ -0.42
SCARNA16.1-201ENST00000516133 MRPL42Q9Y6G3 142 aaKnown RBP12.45□□□□□ -0.42
SCARNA16.1-201ENST00000516133 MYO7AQ13402 2215 aa12.45□□□□□ -0.42
SCARNA16.1-201ENST00000516133 VPS37CA5D8V6 355 aaPredicted RBP12.44□□□□□ -0.42
SCARNA16.1-201ENST00000516133 TBKBP1A7MCY6 615 aa12.44□□□□□ -0.42
SCARNA16.1-201ENST00000516133 USO1O60763 962 aaKnown RBP12.44□□□□□ -0.42
SCARNA16.1-201ENST00000516133 ZNF623O75123 536 aa12.44□□□□□ -0.42
SCARNA16.1-201ENST00000516133 LINC00271P0C7V0 271 aa12.44□□□□□ -0.42
SCARNA16.1-201ENST00000516133 FGFR1P11362 822 aa12.44□□□□□ -0.42
SCARNA16.1-201ENST00000516133 CYP11B2P19099 503 aa12.44□□□□□ -0.42
SCARNA16.1-201ENST00000516133 SYT1P21579 422 aa12.44□□□□□ -0.42
SCARNA16.1-201ENST00000516133 AXLP30530 894 aa12.44□□□□□ -0.42
SCARNA16.1-201ENST00000516133 RAB27AP51159 221 aa12.44□□□□□ -0.42
SCARNA16.1-201ENST00000516133 SKIV2LQ15477 1246 aaKnown RBP12.44□□□□□ -0.42
SCARNA16.1-201ENST00000516133 IL17AQ16552 155 aa12.44□□□□□ -0.42
SCARNA16.1-201ENST00000516133 CSPP1Q1MSJ5 1256 aa12.44□□□□□ -0.42
SCARNA16.1-201ENST00000516133 PAN2Q504Q3 1202 aaKnown RBP12.44□□□□□ -0.42
SCARNA16.1-201ENST00000516133 PADI6Q6TGC4 694 aa12.44□□□□□ -0.42
SCARNA16.1-201ENST00000516133 IFNLR1Q8IU57 520 aaPredicted RBP12.44□□□□□ -0.42
SCARNA16.1-201ENST00000516133 SNX29Q8TEQ0 813 aa12.44□□□□□ -0.42
SCARNA16.1-201ENST00000516133 ATXN2LQ8WWM7 1075 aaKnown RBP12.44□□□□□ -0.42
SCARNA16.1-201ENST00000516133 LMAN2LQ9H0V9 348 aa12.44□□□□□ -0.42
SCARNA16.1-201ENST00000516133 AGPAT5Q9NUQ2 364 aa12.44□□□□□ -0.42
SCARNA16.1-201ENST00000516133 PCDHB12Q9Y5F1 795 aa12.44□□□□□ -0.42
SCARNA16.1-201ENST00000516133 BRWD1Q9NSI6 2320 aa12.44□□□□□ -0.42
SCARNA16.1-201ENST00000516133 ERLIN2O94905 339 aa12.43□□□□□ -0.42
SCARNA16.1-201ENST00000516133 PDIA4P13667 645 aaKnown RBP12.43□□□□□ -0.42
SCARNA16.1-201ENST00000516133 GLRA2P23416 452 aa12.43□□□□□ -0.42
SCARNA16.1-201ENST00000516133 GATMP50440 423 aa12.43□□□□□ -0.42
SCARNA16.1-201ENST00000516133 ECM1Q16610 540 aa12.43□□□□□ -0.42
SCARNA16.1-201ENST00000516133 AAK1Q2M2I8 961 aa12.43□□□□□ -0.42
SCARNA16.1-201ENST00000516133 SPOUT1Q5T280 376 aaKnown RBP12.43□□□□□ -0.42
SCARNA16.1-201ENST00000516133 ZNF598Q86UK7 904 aaKnown RBP12.43□□□□□ -0.42
SCARNA16.1-201ENST00000516133 RNF169Q8NCN4 708 aa12.43□□□□□ -0.42
SCARNA16.1-201ENST00000516133 ASAP3Q8TDY4 903 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms