RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 PRRC2BQ5JSZ5 2229 aaKnown RBP14.23□□□□□ -0.13
CLCN3-210ENST00000515420 RBAK-RBAKDNI3L0D1 243 aa14.23□□□□□ -0.13
CLCN3-210ENST00000515420 HOXA2O43364 376 aa14.23□□□□□ -0.13
CLCN3-210ENST00000515420 LPXNO60711 386 aa14.23□□□□□ -0.13
CLCN3-210ENST00000515420 BMP15O95972 392 aa14.23□□□□□ -0.13
CLCN3-210ENST00000515420 RB1P06400 928 aa14.23□□□□□ -0.13
CLCN3-210ENST00000515420 IGFBP4P22692 258 aa14.23□□□□□ -0.13
CLCN3-210ENST00000515420 LAMTOR4Q0VGL1 99 aa14.23□□□□□ -0.13
CLCN3-210ENST00000515420 GRB10Q13322 594 aa14.23□□□□□ -0.13
CLCN3-210ENST00000515420 EPC2Q52LR7 807 aa14.23□□□□□ -0.13
CLCN3-210ENST00000515420 DTHD1Q6ZMT9 781 aa14.23□□□□□ -0.13
CLCN3-210ENST00000515420 TMEM192Q8IY95 271 aa14.23□□□□□ -0.13
CLCN3-210ENST00000515420 KCTD17Q8N5Z5 321 aa14.23□□□□□ -0.13
CLCN3-210ENST00000515420 MCPH1Q8NEM0 835 aa14.23□□□□□ -0.13
CLCN3-210ENST00000515420 FBXO22Q8NEZ5 403 aa14.23□□□□□ -0.13
CLCN3-210ENST00000515420 PIGOQ8TEQ8 1089 aa14.23□□□□□ -0.13
CLCN3-210ENST00000515420 PRPF31Q8WWY3 499 aaKnown RBP14.23□□□□□ -0.13
CLCN3-210ENST00000515420 TMEM143Q96AN5 459 aa14.23□□□□□ -0.13
CLCN3-210ENST00000515420 CERS4Q9HA82 394 aa14.23□□□□□ -0.13
CLCN3-210ENST00000515420 KIAA1671Q9BY89 1806 aa14.22□□□□□ -0.13
CLCN3-210ENST00000515420 A0A0U1RQF3 1178 aa14.22□□□□□ -0.13
CLCN3-210ENST00000515420 LINC00271P0C7V0 271 aa14.22□□□□□ -0.13
CLCN3-210ENST00000515420 CCT6AP40227 531 aaKnown RBP14.22□□□□□ -0.13
CLCN3-210ENST00000515420 TFDP1Q14186 410 aa14.22□□□□□ -0.13
CLCN3-210ENST00000515420 BTG3Q14201 252 aaPredicted RBP14.22□□□□□ -0.13
CLCN3-210ENST00000515420 SPRED2Q7Z698 418 aa14.22□□□□□ -0.13
CLCN3-210ENST00000515420 IFNLR1Q8IU57 520 aaPredicted RBP14.22□□□□□ -0.13
CLCN3-210ENST00000515420 ZNF668Q96K58 619 aaPredicted RBP14.22□□□□□ -0.13
CLCN3-210ENST00000515420 NLRP4Q96MN2 994 aa14.22□□□□□ -0.13
CLCN3-210ENST00000515420 C17orf80Q9BSJ5 609 aa14.22□□□□□ -0.13
CLCN3-210ENST00000515420 PLVAPQ9BX97 442 aa14.22□□□□□ -0.13
CLCN3-210ENST00000515420 NFKBIZQ9BYH8 718 aa14.22□□□□□ -0.13
CLCN3-210ENST00000515420 MTCH2Q9Y6C9 303 aa14.22□□□□□ -0.13
CLCN3-210ENST00000515420 H3BNC9 293 aa14.21□□□□□ -0.13
CLCN3-210ENST00000515420 EOMESO95936 686 aa14.21□□□□□ -0.13
CLCN3-210ENST00000515420 SKIP12755 728 aa14.21□□□□□ -0.13
CLCN3-210ENST00000515420 ARL2P36404 184 aa14.21□□□□□ -0.13
CLCN3-210ENST00000515420 BMPR1AP36894 532 aa14.21□□□□□ -0.13
CLCN3-210ENST00000515420 PHKA2P46019 1235 aa14.21□□□□□ -0.13
CLCN3-210ENST00000515420 RAB27AP51159 221 aa14.21□□□□□ -0.13
CLCN3-210ENST00000515420 NAALADL2Q58DX5 795 aa14.21□□□□□ -0.13
CLCN3-210ENST00000515420 KRT79Q5XKE5 535 aa14.21□□□□□ -0.13
CLCN3-210ENST00000515420 POTEGQ6S5H5 508 aa14.21□□□□□ -0.13
CLCN3-210ENST00000515420 ECHDC2Q86YB7 292 aa14.21□□□□□ -0.13
CLCN3-210ENST00000515420 KSR1Q8IVT5 923 aa14.21□□□□□ -0.13
CLCN3-210ENST00000515420 RNF149Q8NC42 400 aa14.21□□□□□ -0.13
CLCN3-210ENST00000515420 SNX29Q8TEQ0 813 aa14.21□□□□□ -0.13
CLCN3-210ENST00000515420 GDPD5Q8WTR4 605 aa14.21□□□□□ -0.13
CLCN3-210ENST00000515420 C11orf84Q9BUA3 381 aaPredicted RBP14.21□□□□□ -0.13
CLCN3-210ENST00000515420 MTUS1Q9ULD2 1270 aa14.21□□□□□ -0.13
CLCN3-210ENST00000515420 UNC80Q8N2C7 3258 aa14.2□□□□□ -0.14
CLCN3-210ENST00000515420 VPS37CA5D8V6 355 aaPredicted RBP14.2□□□□□ -0.14
CLCN3-210ENST00000515420 ARHGEF35A5YM69 484 aa14.2□□□□□ -0.14
CLCN3-210ENST00000515420 RFXAPO00287 272 aa14.2□□□□□ -0.14
CLCN3-210ENST00000515420 SLC26A4O43511 780 aa14.2□□□□□ -0.14
CLCN3-210ENST00000515420 USO1O60763 962 aaKnown RBP14.2□□□□□ -0.14
CLCN3-210ENST00000515420 PDIA4P13667 645 aaKnown RBP14.2□□□□□ -0.14
CLCN3-210ENST00000515420 SYT1P21579 422 aa14.2□□□□□ -0.14
CLCN3-210ENST00000515420 AXLP30530 894 aa14.2□□□□□ -0.14
CLCN3-210ENST00000515420 PTENP60484 403 aa14.2□□□□□ -0.14
CLCN3-210ENST00000515420 CATSPER4Q7RTX7 472 aa14.2□□□□□ -0.14
CLCN3-210ENST00000515420 SLC17A8Q8NDX2 589 aa14.2□□□□□ -0.14
CLCN3-210ENST00000515420 P2RX5Q93086 422 aa14.2□□□□□ -0.14
CLCN3-210ENST00000515420 TMEM117Q9H0C3 514 aa14.2□□□□□ -0.14
CLCN3-210ENST00000515420 LMAN2LQ9H0V9 348 aa14.2□□□□□ -0.14
CLCN3-210ENST00000515420 BMP2KQ9NSY1 1161 aaPredicted RBP14.2□□□□□ -0.14
CLCN3-210ENST00000515420 AGPAT5Q9NUQ2 364 aa14.2□□□□□ -0.14
CLCN3-210ENST00000515420 DAXXQ9UER7 740 aaPredicted RBP14.2□□□□□ -0.14
CLCN3-210ENST00000515420 PIN4Q9Y237 131 aaKnown RBP14.2□□□□□ -0.14
CLCN3-210ENST00000515420 REV3LO60673 3130 aa14.19□□□□□ -0.14
CLCN3-210ENST00000515420 ZNF623O75123 536 aa14.19□□□□□ -0.14
CLCN3-210ENST00000515420 CSDE1O75534 798 aaKnown RBP14.19□□□□□ -0.14
CLCN3-210ENST00000515420 SRGAP2CP0DJJ0 459 aa14.19□□□□□ -0.14
CLCN3-210ENST00000515420 FGFR4P22455 802 aa14.19□□□□□ -0.14
CLCN3-210ENST00000515420 CTNNB1P35222 781 aa14.19□□□□□ -0.14
CLCN3-210ENST00000515420 CAPSQ13938 189 aa14.19□□□□□ -0.14
CLCN3-210ENST00000515420 IL17AQ16552 155 aa14.19□□□□□ -0.14
CLCN3-210ENST00000515420 PTPROQ16827 1216 aa14.19□□□□□ -0.14
CLCN3-210ENST00000515420 HYIQ5T013 277 aa14.19□□□□□ -0.14
CLCN3-210ENST00000515420 PADI6Q6TGC4 694 aa14.19□□□□□ -0.14
CLCN3-210ENST00000515420 ZNF598Q86UK7 904 aaKnown RBP14.19□□□□□ -0.14
CLCN3-210ENST00000515420 HSCBQ8IWL3 235 aa14.19□□□□□ -0.14
CLCN3-210ENST00000515420 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.19□□□□□ -0.14
CLCN3-210ENST00000515420 MRPL38Q96DV4 380 aaKnown RBP14.19□□□□□ -0.14
CLCN3-210ENST00000515420 AK8Q96MA6 479 aa14.19□□□□□ -0.14
CLCN3-210ENST00000515420 NT5C3AQ9H0P0 336 aa14.19□□□□□ -0.14
CLCN3-210ENST00000515420 POLR3FQ9H1D9 316 aaPredicted RBP14.19□□□□□ -0.14
CLCN3-210ENST00000515420 MRPL42Q9Y6G3 142 aaKnown RBP14.19□□□□□ -0.14
CLCN3-210ENST00000515420 TBKBP1A7MCY6 615 aa14.18□□□□□ -0.14
CLCN3-210ENST00000515420 ERLIN2O94905 339 aa14.18□□□□□ -0.14
CLCN3-210ENST00000515420 CYP11B2P19099 503 aa14.18□□□□□ -0.14
CLCN3-210ENST00000515420 GLRA2P23416 452 aa14.18□□□□□ -0.14
CLCN3-210ENST00000515420 GPM6BQ13491 265 aa14.18□□□□□ -0.14
CLCN3-210ENST00000515420 ECM1Q16610 540 aa14.18□□□□□ -0.14
CLCN3-210ENST00000515420 CSPP1Q1MSJ5 1256 aa14.18□□□□□ -0.14
CLCN3-210ENST00000515420 TWF2Q6IBS0 349 aaKnown RBP14.18□□□□□ -0.14
CLCN3-210ENST00000515420 ASAP3Q8TDY4 903 aa14.18□□□□□ -0.14
CLCN3-210ENST00000515420 CCDC51Q96ER9 411 aa14.18□□□□□ -0.14
CLCN3-210ENST00000515420 MMTAG2Q9BU76 263 aaKnown RBP14.18□□□□□ -0.14
CLCN3-210ENST00000515420 MINDY3Q9H8M7 445 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms