RNA–Protein interactions for RNA: ENST00000514929.1

SNF8-213, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-213ENST00000514929 RNF169Q8NCN4 708 aa27.34■■□□□ 1.97
SNF8-213ENST00000514929 NSUN3Q9H649 340 aaKnown RBP27.34■■□□□ 1.97
SNF8-213ENST00000514929 ALG13Q9NP73 1137 aaKnown RBP27.34■■□□□ 1.97
SNF8-213ENST00000514929 CHST12Q9NRB3 414 aa27.34■■□□□ 1.97
SNF8-213ENST00000514929 ARID2Q68CP9 1835 aa27.33■■□□□ 1.97
SNF8-213ENST00000514929 OR52Z1P0C646 297 aa27.33■■□□□ 1.97
SNF8-213ENST00000514929 TCEAL5Q5H9L2 206 aa27.33■■□□□ 1.97
SNF8-213ENST00000514929 ABI1Q8IZP0 508 aa27.33■■□□□ 1.97
SNF8-213ENST00000514929 ADAMTS19Q8TE59 1207 aa27.33■■□□□ 1.97
SNF8-213ENST00000514929 TMX3Q96JJ7 454 aa27.33■■□□□ 1.97
SNF8-213ENST00000514929 MTRQ99707 1265 aa27.33■■□□□ 1.97
SNF8-213ENST00000514929 AAASQ9NRG9 546 aa27.33■■□□□ 1.97
SNF8-213ENST00000514929 ANKEF1Q9NU02 776 aa27.33■■□□□ 1.97
SNF8-213ENST00000514929 PLAGL2Q9UPG8 496 aa27.33■■□□□ 1.97
SNF8-213ENST00000514929 FNDC1Q4ZHG4 1894 aaPredicted RBP27.33■■□□□ 1.97
SNF8-213ENST00000514929 CSPG5O95196 566 aa27.32■■□□□ 1.96
SNF8-213ENST00000514929 SRGAP2CP0DJJ0 459 aa27.32■■□□□ 1.96
SNF8-213ENST00000514929 TRAPPC10P48553 1259 aa27.32■■□□□ 1.96
SNF8-213ENST00000514929 CATSPER4Q7RTX7 472 aa27.32■■□□□ 1.96
SNF8-213ENST00000514929 KLHL23Q8NBE8 558 aa27.32■■□□□ 1.96
SNF8-213ENST00000514929 TBC1D32Q96NH3 1257 aa27.32■■□□□ 1.96
SNF8-213ENST00000514929 TMEM117Q9H0C3 514 aa27.32■■□□□ 1.96
SNF8-213ENST00000514929 UBE2ZQ9H832 354 aaPredicted RBP27.32■■□□□ 1.96
SNF8-213ENST00000514929 PIN4Q9Y237 131 aaKnown RBP27.32■■□□□ 1.96
SNF8-213ENST00000514929 PCDHB12Q9Y5F1 795 aa27.32■■□□□ 1.96
SNF8-213ENST00000514929 A0A0U1RQF3 1178 aa27.31■■□□□ 1.96
SNF8-213ENST00000514929 CD2BP2O95400 341 aaKnown RBP27.31■■□□□ 1.96
SNF8-213ENST00000514929 ITGB1P05556 798 aa27.31■■□□□ 1.96
SNF8-213ENST00000514929 BMP1P13497 986 aa27.31■■□□□ 1.96
SNF8-213ENST00000514929 TECP42680 631 aa27.31■■□□□ 1.96
SNF8-213ENST00000514929 MCM2P49736 904 aa27.31■■□□□ 1.96
SNF8-213ENST00000514929 LAMTOR4Q0VGL1 99 aa27.31■■□□□ 1.96
SNF8-213ENST00000514929 TWF2Q6IBS0 349 aaKnown RBP27.31■■□□□ 1.96
SNF8-213ENST00000514929 IFT122Q9HBG6 1241 aa27.31■■□□□ 1.96
SNF8-213ENST00000514929 TYW1Q9NV66 732 aaKnown RBP27.31■■□□□ 1.96
SNF8-213ENST00000514929 ASAP2O43150 1006 aa27.3■■□□□ 1.96
SNF8-213ENST00000514929 EOMESO95936 686 aa27.3■■□□□ 1.96
SNF8-213ENST00000514929 U2AF2P26368 475 aaKnown RBP eCLIP27.3■■□□□ 1.968e-7■□□□□ 10.3
SNF8-213ENST00000514929 PIGOQ8TEQ8 1089 aa27.3■■□□□ 1.96
SNF8-213ENST00000514929 UHRF1Q96T88 793 aaPredicted RBP27.3■■□□□ 1.96
SNF8-213ENST00000514929 TUFT1Q9NNX1 390 aa27.3■■□□□ 1.96
SNF8-213ENST00000514929 SPTBN5Q9NRC6 3674 aaKnown RBP27.29■■□□□ 1.96
SNF8-213ENST00000514929 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP27.29■■□□□ 1.96
SNF8-213ENST00000514929 DGAT1O75907 488 aa27.29■■□□□ 1.96
SNF8-213ENST00000514929 SRGAP1Q7Z6B7 1085 aa27.29■■□□□ 1.96
SNF8-213ENST00000514929 FERMT3Q86UX7 667 aa27.29■■□□□ 1.96
SNF8-213ENST00000514929 RNF149Q8NC42 400 aa27.29■■□□□ 1.96
SNF8-213ENST00000514929 ERMNQ8TAM6 284 aa27.29■■□□□ 1.96
SNF8-213ENST00000514929 SPPL3Q8TCT6 385 aa27.29■■□□□ 1.96
SNF8-213ENST00000514929 CASD1Q96PB1 797 aa27.29■■□□□ 1.96
SNF8-213ENST00000514929 XPNPEP1Q9NQW7 623 aa27.29■■□□□ 1.96
SNF8-213ENST00000514929 RNF19AQ9NV58 838 aa27.29■■□□□ 1.96
SNF8-213ENST00000514929 HCSTQ9UBK5 93 aa27.29■■□□□ 1.96
SNF8-213ENST00000514929 A0A087WWV3 80 aa27.28■■□□□ 1.96
SNF8-213ENST00000514929 KCNA5P22460 613 aa27.28■■□□□ 1.96
SNF8-213ENST00000514929 RARRES1P49788 294 aa27.28■■□□□ 1.96
SNF8-213ENST00000514929 MXD4Q14582 209 aaPredicted RBP27.28■■□□□ 1.96
SNF8-213ENST00000514929 NBR1Q14596 966 aa27.28■■□□□ 1.96
SNF8-213ENST00000514929 EP400NLQ6ZTU2 488 aa27.28■■□□□ 1.96
SNF8-213ENST00000514929 CATSPER3Q86XQ3 398 aa27.28■■□□□ 1.96
SNF8-213ENST00000514929 SPATA31C1P0DKV0 1188 aa27.27■■□□□ 1.96
SNF8-213ENST00000514929 SKIP12755 728 aa27.27■■□□□ 1.96
SNF8-213ENST00000514929 XRCC6P12956 609 aaKnown RBP eCLIP27.27■■□□□ 1.961e-6■■■■■ 27.1
SNF8-213ENST00000514929 LAG3P18627 525 aa27.27■■□□□ 1.96
SNF8-213ENST00000514929 PHKA2P46019 1235 aa27.27■■□□□ 1.96
SNF8-213ENST00000514929 CSPP1Q1MSJ5 1256 aa27.27■■□□□ 1.96
SNF8-213ENST00000514929 MCTP1Q6DN14 999 aa27.27■■□□□ 1.96
SNF8-213ENST00000514929 ZNF598Q86UK7 904 aaKnown RBP27.27■■□□□ 1.96
SNF8-213ENST00000514929 LRRC43Q8N309 656 aa27.27■■□□□ 1.96
SNF8-213ENST00000514929 COLGALT1Q8NBJ5 622 aa27.27■■□□□ 1.96
SNF8-213ENST00000514929 POF1BQ8WVV4 589 aa27.27■■□□□ 1.96
SNF8-213ENST00000514929 TRAIPQ9BWF2 469 aa27.27■■□□□ 1.96
SNF8-213ENST00000514929 CWH43Q9H720 699 aa27.27■■□□□ 1.96
SNF8-213ENST00000514929 AGPAT5Q9NUQ2 364 aa27.27■■□□□ 1.96
SNF8-213ENST00000514929 MED24O75448 989 aa27.26■■□□□ 1.95
SNF8-213ENST00000514929 ATF7P17544 494 aaPredicted RBP27.26■■□□□ 1.95
SNF8-213ENST00000514929 DNAJB1P25685 340 aa27.26■■□□□ 1.95
SNF8-213ENST00000514929 GJB2P29033 226 aa27.26■■□□□ 1.95
SNF8-213ENST00000514929 CAMK1Q14012 370 aa27.26■■□□□ 1.95
SNF8-213ENST00000514929 TFDP1Q14186 410 aa27.26■■□□□ 1.95
SNF8-213ENST00000514929 CLLU1OSQ5K130 101 aa27.26■■□□□ 1.95
SNF8-213ENST00000514929 THNSL1Q8IYQ7 743 aa27.26■■□□□ 1.95
SNF8-213ENST00000514929 HELQQ8TDG4 1101 aa27.26■■□□□ 1.95
SNF8-213ENST00000514929 PABPC5Q96DU9 382 aaKnown RBP27.26■■□□□ 1.95
SNF8-213ENST00000514929 POLR3CQ9BUI4 534 aaPredicted RBP27.26■■□□□ 1.95
SNF8-213ENST00000514929 MINDY3Q9H8M7 445 aa27.26■■□□□ 1.95
SNF8-213ENST00000514929 FAM105AQ9NUU6 356 aa27.26■■□□□ 1.95
SNF8-213ENST00000514929 TCF20Q9UGU0 1960 aaKnown RBP27.26■■□□□ 1.95
SNF8-213ENST00000514929 TNFRSF10AO00220 468 aa27.25■■□□□ 1.95
SNF8-213ENST00000514929 NCK2O43639 380 aa27.25■■□□□ 1.95
SNF8-213ENST00000514929 USO1O60763 962 aaKnown RBP27.25■■□□□ 1.95
SNF8-213ENST00000514929 FGF18O76093 207 aa27.25■■□□□ 1.95
SNF8-213ENST00000514929 RAB27AP51159 221 aa27.25■■□□□ 1.95
SNF8-213ENST00000514929 LRRC55Q6ZSA7 311 aa27.25■■□□□ 1.95
SNF8-213ENST00000514929 PPP2R3CQ969Q6 453 aa27.25■■□□□ 1.95
SNF8-213ENST00000514929 NACC1Q96RE7 527 aa27.25■■□□□ 1.95
SNF8-213ENST00000514929 CLDND1Q9NY35 253 aa27.25■■□□□ 1.95
SNF8-213ENST00000514929 ATG2AQ2TAZ0 1938 aa27.25■■□□□ 1.95
SNF8-213ENST00000514929 H3BQV1 296 aa27.24■■□□□ 1.95
SNF8-213ENST00000514929 RPA1P27694 616 aa27.24■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms