RNA–Protein interactions for RNA: ENST00000514344.5

CHD1-211, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 2,955 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-211ENST00000514344 NOC2LQ9Y3T9 749 aaKnown RBP3.78□□□□□ -1.81
CHD1-211ENST00000514344 TRPV2Q9Y5S1 764 aa3.78□□□□□ -1.81
CHD1-211ENST00000514344 INPPL1O15357 1258 aa3.77□□□□□ -1.81
CHD1-211ENST00000514344 GPAA1O43292 621 aa3.77□□□□□ -1.81
CHD1-211ENST00000514344 FOXD2O60548 495 aaPredicted RBP3.77□□□□□ -1.81
CHD1-211ENST00000514344 TGFB3P10600 412 aa3.77□□□□□ -1.81
CHD1-211ENST00000514344 TRIM27P14373 513 aa3.77□□□□□ -1.81
CHD1-211ENST00000514344 PLA2G2AP14555 144 aa3.77□□□□□ -1.81
CHD1-211ENST00000514344 BCAR1P56945 870 aa3.77□□□□□ -1.81
CHD1-211ENST00000514344 KRT76Q01546 638 aa3.77□□□□□ -1.81
CHD1-211ENST00000514344 PRKCQQ04759 706 aa3.77□□□□□ -1.81
CHD1-211ENST00000514344 CTDSPL2Q05D32 466 aa3.77□□□□□ -1.81
CHD1-211ENST00000514344 PPP2R5DQ14738 602 aa3.77□□□□□ -1.81
CHD1-211ENST00000514344 PGM5Q15124 567 aa3.77□□□□□ -1.81
CHD1-211ENST00000514344 CDC37Q16543 378 aaPredicted RBP3.77□□□□□ -1.81
CHD1-211ENST00000514344 RRP12Q5JTH9 1297 aaKnown RBP3.77□□□□□ -1.81
CHD1-211ENST00000514344 METTL7BQ6UX53 244 aa3.77□□□□□ -1.81
CHD1-211ENST00000514344 ZNF605Q86T29 641 aa3.77□□□□□ -1.81
CHD1-211ENST00000514344 FCHSD1Q86WN1 690 aa3.77□□□□□ -1.81
CHD1-211ENST00000514344 OSBP2Q969R2 916 aa3.77□□□□□ -1.81
CHD1-211ENST00000514344 CRELD1Q96HD1 420 aa3.77□□□□□ -1.81
CHD1-211ENST00000514344 KLHL5Q96PQ7 755 aa3.77□□□□□ -1.81
CHD1-211ENST00000514344 KXD1Q9BQD3 176 aa3.77□□□□□ -1.81
CHD1-211ENST00000514344 CELF4Q9BZC1 486 aaKnown RBP3.77□□□□□ -1.81
CHD1-211ENST00000514344 TMEM117Q9H0C3 514 aa3.77□□□□□ -1.81
CHD1-211ENST00000514344 VAT1LQ9HCJ6 419 aa3.77□□□□□ -1.81
CHD1-211ENST00000514344 RGS18Q9NS28 235 aa3.77□□□□□ -1.81
CHD1-211ENST00000514344 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP3.77□□□□□ -1.81
CHD1-211ENST00000514344 ST3GAL5Q9UNP4 418 aa3.77□□□□□ -1.81
CHD1-211ENST00000514344 NOP58Q9Y2X3 529 aaKnown RBP3.77□□□□□ -1.81
CHD1-211ENST00000514344 PCDHA1Q9Y5I3 950 aa3.77□□□□□ -1.81
CHD1-211ENST00000514344 SHROOM3Q8TF72 1996 aa3.77□□□□□ -1.81
CHD1-211ENST00000514344 NOTCH2Q04721 2471 aa3.77□□□□□ -1.81
CHD1-211ENST00000514344 DOPEY1Q5JWR5 2465 aa3.77□□□□□ -1.81
CHD1-211ENST00000514344 ANKRD17O75179 2603 aaKnown RBP3.77□□□□□ -1.81
CHD1-211ENST00000514344 MYH6P13533 1939 aa3.77□□□□□ -1.81
CHD1-211ENST00000514344 SLC3A2P08195 630 aaKnown RBP3.77□□□□□ -1.81
CHD1-211ENST00000514344 ZNF806P0C7X5 589 aa3.77□□□□□ -1.81
CHD1-211ENST00000514344 CTSAP10619 480 aa3.77□□□□□ -1.81
CHD1-211ENST00000514344 TDGF1P13385 188 aa3.77□□□□□ -1.81
CHD1-211ENST00000514344 INSRRP14616 1297 aa3.77□□□□□ -1.81
CHD1-211ENST00000514344 AK2P54819 239 aa3.77□□□□□ -1.81
CHD1-211ENST00000514344 SATB1Q01826 763 aa3.77□□□□□ -1.81
CHD1-211ENST00000514344 PPARAQ07869 468 aa3.77□□□□□ -1.81
CHD1-211ENST00000514344 TROAPQ12815 778 aa3.77□□□□□ -1.81
CHD1-211ENST00000514344 FZD5Q13467 585 aa3.77□□□□□ -1.81
CHD1-211ENST00000514344 VSIG10LQ86VR7 867 aa3.77□□□□□ -1.81
CHD1-211ENST00000514344 PPFIBP1Q86W92 1011 aa3.77□□□□□ -1.81
CHD1-211ENST00000514344 MCF2L2Q86YR7 1114 aa3.77□□□□□ -1.81
CHD1-211ENST00000514344 GLYCTKQ8IVS8 523 aa3.77□□□□□ -1.81
CHD1-211ENST00000514344 IFNL3Q8IZI9 196 aa3.77□□□□□ -1.81
CHD1-211ENST00000514344 CLASRPQ8N2M8 674 aaKnown RBP3.77□□□□□ -1.81
CHD1-211ENST00000514344 RGS22Q8NE09 1264 aa3.77□□□□□ -1.81
CHD1-211ENST00000514344 HELQQ8TDG4 1101 aa3.77□□□□□ -1.81
CHD1-211ENST00000514344 PHKBQ93100 1093 aa3.77□□□□□ -1.81
CHD1-211ENST00000514344 CLDN23Q96B33 292 aa3.77□□□□□ -1.81
CHD1-211ENST00000514344 TMEM47Q9BQJ4 181 aa3.77□□□□□ -1.81
CHD1-211ENST00000514344 EDEM2Q9BV94 578 aa3.77□□□□□ -1.81
CHD1-211ENST00000514344 OSBPL6Q9BZF3 934 aa3.77□□□□□ -1.81
CHD1-211ENST00000514344 GBP3Q9H0R5 595 aa3.77□□□□□ -1.81
CHD1-211ENST00000514344 NAPBQ9H115 298 aa3.77□□□□□ -1.81
CHD1-211ENST00000514344 MBLAC1A4D2B0 266 aaPredicted RBP3.76□□□□□ -1.81
CHD1-211ENST00000514344 ANHXE9PGG2 379 aa3.76□□□□□ -1.81
CHD1-211ENST00000514344 C1QL1O75973 258 aa3.76□□□□□ -1.81
CHD1-211ENST00000514344 RPS9P46781 194 aaKnown RBP3.76□□□□□ -1.81
CHD1-211ENST00000514344 PXNP49023 591 aaPredicted RBP3.76□□□□□ -1.81
CHD1-211ENST00000514344 ZNF543Q08ER8 600 aa3.76□□□□□ -1.81
CHD1-211ENST00000514344 PLCB4Q15147 1175 aa3.76□□□□□ -1.81
CHD1-211ENST00000514344 CLLU1OSQ5K130 101 aa3.76□□□□□ -1.81
CHD1-211ENST00000514344 GIMAP6Q6P9H5 292 aa3.76□□□□□ -1.81
CHD1-211ENST00000514344 ZNF852Q6ZMS4 543 aa3.76□□□□□ -1.81
CHD1-211ENST00000514344 RHPN1Q8TCX5 695 aa3.76□□□□□ -1.81
CHD1-211ENST00000514344 BCL7CQ8WUZ0 217 aaPredicted RBP3.76□□□□□ -1.81
CHD1-211ENST00000514344 C1orf112Q9NSG2 853 aa3.76□□□□□ -1.81
CHD1-211ENST00000514344 ERAP1Q9NZ08 941 aa3.76□□□□□ -1.81
CHD1-211ENST00000514344 PKD2L1Q9P0L9 805 aa3.76□□□□□ -1.81
CHD1-211ENST00000514344 PNMA2Q9UL42 364 aa3.76□□□□□ -1.81
CHD1-211ENST00000514344 IRAK3Q9Y616 596 aa3.76□□□□□ -1.81
CHD1-211ENST00000514344 SQORQ9Y6N5 450 aa3.76□□□□□ -1.81
CHD1-211ENST00000514344 ASCC3Q8N3C0 2202 aaKnown RBP3.76□□□□□ -1.81
CHD1-211ENST00000514344 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP3.76□□□□□ -1.81
CHD1-211ENST00000514344 SHISA7A6NL88 538 aa3.76□□□□□ -1.81
CHD1-211ENST00000514344 HOXB1P14653 301 aaPredicted RBP3.76□□□□□ -1.81
CHD1-211ENST00000514344 MPLP40238 635 aa3.76□□□□□ -1.81
CHD1-211ENST00000514344 MAGEA9P43362 315 aa3.76□□□□□ -1.81
CHD1-211ENST00000514344 CXCL12P48061 93 aa3.76□□□□□ -1.81
CHD1-211ENST00000514344 NEDD9Q14511 834 aa3.76□□□□□ -1.81
CHD1-211ENST00000514344 KIZQ2M2Z5 673 aa3.76□□□□□ -1.81
CHD1-211ENST00000514344 UAP1L1Q3KQV9 507 aa3.76□□□□□ -1.81
CHD1-211ENST00000514344 GNPTABQ3T906 1256 aa3.76□□□□□ -1.81
CHD1-211ENST00000514344 PPP4R3BQ5MIZ7 849 aa3.76□□□□□ -1.81
CHD1-211ENST00000514344 ZSCAN25Q6NSZ9 544 aa3.76□□□□□ -1.81
CHD1-211ENST00000514344 TRMT1LQ7Z2T5 733 aaKnown RBP3.76□□□□□ -1.81
CHD1-211ENST00000514344 DEFB124Q8NES8 71 aa3.76□□□□□ -1.81
CHD1-211ENST00000514344 SEC62Q99442 399 aaKnown RBP3.76□□□□□ -1.81
CHD1-211ENST00000514344 OSMRQ99650 979 aa3.76□□□□□ -1.81
CHD1-211ENST00000514344 EMILIN2Q9BXX0 1053 aa3.76□□□□□ -1.81
CHD1-211ENST00000514344 RNF19AQ9NV58 838 aa3.76□□□□□ -1.81
CHD1-211ENST00000514344 CACNA2D2Q9NY47 1150 aa3.76□□□□□ -1.81
CHD1-211ENST00000514344 POLIQ9UNA4 740 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms