RNA–Protein interactions for RNA: ENST00000513666.5

CAST-239, Transcript of calpastatin, humanhuman

TSL 2

Gene CAST, Length 1,539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-239ENST00000513666 SART3Q15020 963 aaKnown RBP10.23□□□□□ -0.77
CAST-239ENST00000513666 FAM160B1Q5W0V3 765 aa10.23□□□□□ -0.77
CAST-239ENST00000513666 PPFIBP1Q86W92 1011 aa10.23□□□□□ -0.77
CAST-239ENST00000513666 HELQQ8TDG4 1101 aa10.23□□□□□ -0.77
CAST-239ENST00000513666 MAP3K14Q99558 947 aa10.23□□□□□ -0.77
CAST-239ENST00000513666 MRPL9Q9BYD2 267 aaKnown RBP10.23□□□□□ -0.77
CAST-239ENST00000513666 PCDHA6Q9UN73 950 aa10.23□□□□□ -0.77
CAST-239ENST00000513666 PCDHA8Q9Y5H6 950 aa10.23□□□□□ -0.77
CAST-239ENST00000513666 BACH1O14867 736 aa10.23□□□□□ -0.77
CAST-239ENST00000513666 VTNP04004 478 aa10.23□□□□□ -0.77
CAST-239ENST00000513666 CFHP08603 1231 aa10.23□□□□□ -0.77
CAST-239ENST00000513666 RFX1P22670 979 aa10.23□□□□□ -0.77
CAST-239ENST00000513666 KIF5BP33176 963 aa10.23□□□□□ -0.77
CAST-239ENST00000513666 LETM2Q2VYF4 491 aa10.23□□□□□ -0.77
CAST-239ENST00000513666 PPP1R15BQ5SWA1 713 aa10.23□□□□□ -0.77
CAST-239ENST00000513666 ABHD15Q6UXT9 468 aa10.23□□□□□ -0.77
CAST-239ENST00000513666 DDX53Q86TM3 631 aaKnown RBP10.23□□□□□ -0.77
CAST-239ENST00000513666 ZNF598Q86UK7 904 aaKnown RBP10.23□□□□□ -0.77
CAST-239ENST00000513666 RNF169Q8NCN4 708 aa10.23□□□□□ -0.77
CAST-239ENST00000513666 CTCFLQ8NI51 663 aaPredicted RBP10.23□□□□□ -0.77
CAST-239ENST00000513666 LZTS2Q9BRK4 669 aa10.23□□□□□ -0.77
CAST-239ENST00000513666 LNPKQ9C0E8 428 aa10.23□□□□□ -0.77
CAST-239ENST00000513666 TBC1D17Q9HA65 648 aa10.23□□□□□ -0.77
CAST-239ENST00000513666 GPR179Q6PRD1 2367 aa10.22□□□□□ -0.77
CAST-239ENST00000513666 A0A0U1RQF3 1178 aa10.22□□□□□ -0.77
CAST-239ENST00000513666 CARNS1A5YM72 827 aa10.22□□□□□ -0.77
CAST-239ENST00000513666 DDAH1O94760 285 aa10.22□□□□□ -0.77
CAST-239ENST00000513666 CCNE2O96020 404 aa10.22□□□□□ -0.77
CAST-239ENST00000513666 LSM11P83369 360 aaKnown RBP eCLIP10.22□□□□□ -0.77
CAST-239ENST00000513666 HDAC1Q13547 482 aaPredicted RBP10.22□□□□□ -0.77
CAST-239ENST00000513666 NONOQ15233 471 aaKnown RBP eCLIP10.22□□□□□ -0.77
CAST-239ENST00000513666 PHLDB3Q6NSJ2 640 aa10.22□□□□□ -0.77
CAST-239ENST00000513666 PDXDC2PQ6P474 469 aa10.22□□□□□ -0.77
CAST-239ENST00000513666 C15orf39Q6ZRI6 1047 aa10.22□□□□□ -0.77
CAST-239ENST00000513666 TMEM173Q86WV6 379 aaPredicted RBP10.22□□□□□ -0.77
CAST-239ENST00000513666 CCDC60Q8IWA6 550 aaPredicted RBP10.22□□□□□ -0.77
CAST-239ENST00000513666 SUMF1Q8NBK3 374 aa10.22□□□□□ -0.77
CAST-239ENST00000513666 IGSF21Q96ID5 467 aa10.22□□□□□ -0.77
CAST-239ENST00000513666 IL25Q9H293 177 aa10.22□□□□□ -0.77
CAST-239ENST00000513666 OSBPL3Q9H4L5 887 aa10.22□□□□□ -0.77
CAST-239ENST00000513666 AGO4Q9HCK5 861 aaKnown RBP10.22□□□□□ -0.77
CAST-239ENST00000513666 ZNF302Q9NR11 478 aa10.22□□□□□ -0.77
CAST-239ENST00000513666 DLGAP2Q9P1A6 1054 aa10.22□□□□□ -0.77
CAST-239ENST00000513666 MAP1BP46821 2468 aaKnown RBP10.22□□□□□ -0.77
CAST-239ENST00000513666 CACNA1IQ9P0X4 2223 aa10.21□□□□□ -0.77
CAST-239ENST00000513666 CHD6Q8TD26 2715 aa10.21□□□□□ -0.77
CAST-239ENST00000513666 CACNA1GO43497 2377 aa10.21□□□□□ -0.77
CAST-239ENST00000513666 N4BP1O75113 896 aaKnown RBP10.21□□□□□ -0.78
CAST-239ENST00000513666 ZC3H11AO75152 810 aaKnown RBP eCLIP10.21□□□□□ -0.78
CAST-239ENST00000513666 PLEKHA8P1O95397 391 aa10.21□□□□□ -0.78
CAST-239ENST00000513666 DCNP07585 359 aaKnown RBP10.21□□□□□ -0.78
CAST-239ENST00000513666 CYP21A2P08686 494 aa10.21□□□□□ -0.78
CAST-239ENST00000513666 SRFP11831 508 aa10.21□□□□□ -0.78
CAST-239ENST00000513666 ATP4AP20648 1035 aa10.21□□□□□ -0.78
CAST-239ENST00000513666 SDHBP21912 280 aa10.21□□□□□ -0.78
CAST-239ENST00000513666 EIF4BP23588 611 aaKnown RBP10.21□□□□□ -0.78
CAST-239ENST00000513666 GNAQP50148 359 aa10.21□□□□□ -0.78
CAST-239ENST00000513666 NLRP11P59045 1033 aaKnown RBP10.21□□□□□ -0.78
CAST-239ENST00000513666 PTPN14Q15678 1187 aa10.21□□□□□ -0.78
CAST-239ENST00000513666 CEP55Q53EZ4 464 aa10.21□□□□□ -0.78
CAST-239ENST00000513666 SPECC1Q5M775 1068 aa10.21□□□□□ -0.78
CAST-239ENST00000513666 RALYLQ86SE5 291 aaKnown RBP10.21□□□□□ -0.78
CAST-239ENST00000513666 C1orf210Q8IVY1 113 aa10.21□□□□□ -0.78
CAST-239ENST00000513666 PLEKHM2Q8IWE5 1019 aa10.21□□□□□ -0.78
CAST-239ENST00000513666 ZNF654Q8IZM8 581 aa10.21□□□□□ -0.78
CAST-239ENST00000513666 SRBD1Q8N5C6 995 aaKnown RBP10.21□□□□□ -0.78
CAST-239ENST00000513666 METTL13Q8N6R0 699 aa10.21□□□□□ -0.78
CAST-239ENST00000513666 NCOA7Q8NI08 942 aa10.21□□□□□ -0.78
CAST-239ENST00000513666 IGDCC4Q8TDY8 1250 aa10.21□□□□□ -0.78
CAST-239ENST00000513666 RSAD2Q8WXG1 361 aa10.21□□□□□ -0.78
CAST-239ENST00000513666 BBXQ8WY36 941 aaPredicted RBP10.21□□□□□ -0.78
CAST-239ENST00000513666 RSPH1Q8WYR4 309 aa10.21□□□□□ -0.78
CAST-239ENST00000513666 MYL10Q9BUA6 226 aa10.21□□□□□ -0.78
CAST-239ENST00000513666 ADAMTS10Q9H324 1103 aa10.21□□□□□ -0.78
CAST-239ENST00000513666 CA14Q9ULX7 337 aa10.21□□□□□ -0.78
CAST-239ENST00000513666 SIT1Q9Y3P8 196 aa10.21□□□□□ -0.78
CAST-239ENST00000513666 MYH9P35579 1960 aaKnown RBP10.21□□□□□ -0.78
CAST-239ENST00000513666 CHD8Q9HCK8 2581 aa10.2□□□□□ -0.78
CAST-239ENST00000513666 MEIS1O00470 390 aa10.2□□□□□ -0.78
CAST-239ENST00000513666 KINO60870 393 aaKnown RBP10.2□□□□□ -0.78
CAST-239ENST00000513666 CLCN3P51790 818 aa10.2□□□□□ -0.78
CAST-239ENST00000513666 CLCN4P51793 760 aa10.2□□□□□ -0.78
CAST-239ENST00000513666 ANTXR2P58335 489 aa10.2□□□□□ -0.78
CAST-239ENST00000513666 SWSAP1Q6NVH7 229 aa10.2□□□□□ -0.78
CAST-239ENST00000513666 MIS18BP1Q6P0N0 1132 aa10.2□□□□□ -0.78
CAST-239ENST00000513666 SLC44A3Q8N4M1 653 aa10.2□□□□□ -0.78
CAST-239ENST00000513666 LINC01465Q8N7H1 131 aa10.2□□□□□ -0.78
CAST-239ENST00000513666 CMASQ8NFW8 434 aaPredicted RBP10.2□□□□□ -0.78
CAST-239ENST00000513666 BCL7CQ8WUZ0 217 aaPredicted RBP10.2□□□□□ -0.78
CAST-239ENST00000513666 NXPE3Q969Y0 559 aa10.2□□□□□ -0.78
CAST-239ENST00000513666 BORCS6Q96GS4 357 aa10.2□□□□□ -0.78
CAST-239ENST00000513666 KLHL5Q96PQ7 755 aa10.2□□□□□ -0.78
CAST-239ENST00000513666 MAP7D2Q96T17 732 aa10.2□□□□□ -0.78
CAST-239ENST00000513666 EPS15L1Q9UBC2 864 aa10.2□□□□□ -0.78
CAST-239ENST00000513666 DOCK8Q8NF50 2099 aa10.19□□□□□ -0.78
CAST-239ENST00000513666 E7EWF7 191 aa10.19□□□□□ -0.78
CAST-239ENST00000513666 DDX39AO00148 427 aaKnown RBP10.19□□□□□ -0.78
CAST-239ENST00000513666 MAGEB2O15479 319 aa10.19□□□□□ -0.78
CAST-239ENST00000513666 KLRC2P26717 231 aa10.19□□□□□ -0.78
CAST-239ENST00000513666 GBP2P32456 591 aaPredicted RBP10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms