RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 CYP7B1O75881 506 aa4.85□□□□□ -1.63
PDLIM5-218ENST00000513341 RAD17O75943 681 aa4.85□□□□□ -1.63
PDLIM5-218ENST00000513341 ADAM9Q13443 819 aa4.85□□□□□ -1.63
PDLIM5-218ENST00000513341 ARHGEF6Q15052 776 aa4.85□□□□□ -1.63
PDLIM5-218ENST00000513341 SEZ6Q53EL9 994 aa4.85□□□□□ -1.63
PDLIM5-218ENST00000513341 CD300LDQ6UXZ3 194 aa4.85□□□□□ -1.63
PDLIM5-218ENST00000513341 MORC1Q86VD1 984 aa4.85□□□□□ -1.63
PDLIM5-218ENST00000513341 FAM126BQ8IXS8 530 aa4.85□□□□□ -1.63
PDLIM5-218ENST00000513341 CDCA5Q96FF9 252 aa4.85□□□□□ -1.63
PDLIM5-218ENST00000513341 TMEM168Q9H0V1 697 aa4.85□□□□□ -1.63
PDLIM5-218ENST00000513341 MEGF9Q9H1U4 602 aa4.85□□□□□ -1.63
PDLIM5-218ENST00000513341 PTPN22Q9Y2R2 807 aa4.85□□□□□ -1.63
PDLIM5-218ENST00000513341 IBTKQ9P2D0 1353 aaPredicted RBP4.85□□□□□ -1.63
PDLIM5-218ENST00000513341 A0A0C4DFX4 3053 aa4.84□□□□□ -1.63
PDLIM5-218ENST00000513341 H0YGN5 161 aa4.84□□□□□ -1.63
PDLIM5-218ENST00000513341 TCERG1O14776 1098 aaKnown RBP4.84□□□□□ -1.63
PDLIM5-218ENST00000513341 NTRK1P04629 796 aa4.84□□□□□ -1.63
PDLIM5-218ENST00000513341 CYP1A1P04798 512 aaPredicted RBP4.84□□□□□ -1.63
PDLIM5-218ENST00000513341 CAPN2P17655 700 aa4.84□□□□□ -1.63
PDLIM5-218ENST00000513341 EN2P19622 333 aaPredicted RBP4.84□□□□□ -1.63
PDLIM5-218ENST00000513341 SLC6A11P48066 632 aa4.84□□□□□ -1.63
PDLIM5-218ENST00000513341 MMP14P50281 582 aa4.84□□□□□ -1.63
PDLIM5-218ENST00000513341 HLFQ16534 295 aa4.84□□□□□ -1.63
PDLIM5-218ENST00000513341 PARP10Q53GL7 1025 aa4.84□□□□□ -1.63
PDLIM5-218ENST00000513341 HS1BP3Q53T59 392 aa4.84□□□□□ -1.63
PDLIM5-218ENST00000513341 DLK2Q6UY11 383 aa4.84□□□□□ -1.63
PDLIM5-218ENST00000513341 RNF207Q6ZRF8 634 aa4.84□□□□□ -1.63
PDLIM5-218ENST00000513341 OTOP1Q7RTM1 612 aa4.84□□□□□ -1.63
PDLIM5-218ENST00000513341 PPP1R42Q7Z4L9 355 aa4.84□□□□□ -1.63
PDLIM5-218ENST00000513341 KBTBD2Q8IY47 623 aa4.84□□□□□ -1.63
PDLIM5-218ENST00000513341 ZNF34Q8IZ26 560 aa4.84□□□□□ -1.63
PDLIM5-218ENST00000513341 KLHL36Q8N4N3 616 aa4.84□□□□□ -1.63
PDLIM5-218ENST00000513341 FAM26EQ8N5C1 309 aa4.84□□□□□ -1.63
PDLIM5-218ENST00000513341 PLEKHO2Q8TD55 490 aa4.84□□□□□ -1.63
PDLIM5-218ENST00000513341 ERO1AQ96HE7 468 aa4.84□□□□□ -1.63
PDLIM5-218ENST00000513341 SYT3Q9BQG1 590 aa4.84□□□□□ -1.63
PDLIM5-218ENST00000513341 AP5M1Q9H0R1 490 aa4.84□□□□□ -1.63
PDLIM5-218ENST00000513341 NOL6Q9H6R4 1146 aaKnown RBP4.84□□□□□ -1.63
PDLIM5-218ENST00000513341 ZNF451Q9Y4E5 1061 aa4.84□□□□□ -1.63
PDLIM5-218ENST00000513341 TRIM17Q9Y577 477 aa4.84□□□□□ -1.63
PDLIM5-218ENST00000513341 NUP98P52948 1817 aa4.83□□□□□ -1.64
PDLIM5-218ENST00000513341 SIPA1L3O60292 1781 aaPredicted RBP4.83□□□□□ -1.64
PDLIM5-218ENST00000513341 PAPPA2Q9BXP8 1791 aa4.83□□□□□ -1.64
PDLIM5-218ENST00000513341 CEMIPQ8WUJ3 1361 aa4.83□□□□□ -1.64
PDLIM5-218ENST00000513341 YDJCA8MPS7 323 aa4.83□□□□□ -1.64
PDLIM5-218ENST00000513341 ADM5C9JUS6 153 aa4.83□□□□□ -1.64
PDLIM5-218ENST00000513341 PSMD14O00487 310 aa4.83□□□□□ -1.64
PDLIM5-218ENST00000513341 SGSM2O43147 1006 aa4.83□□□□□ -1.64
PDLIM5-218ENST00000513341 NPHS1O60500 1241 aa4.83□□□□□ -1.64
PDLIM5-218ENST00000513341 VIL1P09327 827 aaKnown RBP4.83□□□□□ -1.64
PDLIM5-218ENST00000513341 HMOX1P09601 288 aa4.83□□□□□ -1.64
PDLIM5-218ENST00000513341 IMPDH2P12268 514 aa4.83□□□□□ -1.64
PDLIM5-218ENST00000513341 NANOS3P60323 173 aaKnown RBP4.83□□□□□ -1.64
PDLIM5-218ENST00000513341 APOBRQ0VD83 1088 aa4.83□□□□□ -1.64
PDLIM5-218ENST00000513341 TCIRG1Q13488 830 aa4.83□□□□□ -1.64
PDLIM5-218ENST00000513341 PRKD1Q15139 912 aaPredicted RBP4.83□□□□□ -1.64
PDLIM5-218ENST00000513341 PRAMEF18Q5VWM3 479 aa4.83□□□□□ -1.64
PDLIM5-218ENST00000513341 OTUD7BQ6GQQ9 843 aa4.83□□□□□ -1.64
PDLIM5-218ENST00000513341 AGBL3Q8NEM8 1001 aa4.83□□□□□ -1.64
PDLIM5-218ENST00000513341 USP33Q8TEY7 942 aa4.83□□□□□ -1.64
PDLIM5-218ENST00000513341 SEC14L1Q92503 715 aa4.83□□□□□ -1.64
PDLIM5-218ENST00000513341 TM9SF2Q99805 663 aa4.83□□□□□ -1.64
PDLIM5-218ENST00000513341 MCMBPQ9BTE3 642 aa4.83□□□□□ -1.64
PDLIM5-218ENST00000513341 NT5C1AQ9BXI3 368 aa4.83□□□□□ -1.64
PDLIM5-218ENST00000513341 IKZF4Q9H2S9 585 aa4.83□□□□□ -1.64
PDLIM5-218ENST00000513341 L2HGDHQ9H9P8 463 aa4.83□□□□□ -1.64
PDLIM5-218ENST00000513341 SEC61A2Q9H9S3 476 aa4.83□□□□□ -1.64
PDLIM5-218ENST00000513341 COPRSQ9NQ92 184 aa4.83□□□□□ -1.64
PDLIM5-218ENST00000513341 GULP1Q9UBP9 304 aa4.83□□□□□ -1.64
PDLIM5-218ENST00000513341 MAP3K15Q6ZN16 1313 aa4.82□□□□□ -1.64
PDLIM5-218ENST00000513341 MANSC4A6NHS7 340 aaPredicted RBP4.82□□□□□ -1.64
PDLIM5-218ENST00000513341 UBE2Q2LH0YL09 131 aa4.82□□□□□ -1.64
PDLIM5-218ENST00000513341 DIAPH1O60610 1272 aaKnown RBP4.82□□□□□ -1.64
PDLIM5-218ENST00000513341 ZBTB48P10074 688 aaPredicted RBP4.82□□□□□ -1.64
PDLIM5-218ENST00000513341 PAMP19021 973 aa4.82□□□□□ -1.64
PDLIM5-218ENST00000513341 MCM7P33993 719 aa4.82□□□□□ -1.64
PDLIM5-218ENST00000513341 NF2P35240 595 aa4.82□□□□□ -1.64
PDLIM5-218ENST00000513341 ZNF280AP59817 542 aaPredicted RBP4.82□□□□□ -1.64
PDLIM5-218ENST00000513341 TCEAL1Q15170 157 aa4.82□□□□□ -1.64
PDLIM5-218ENST00000513341 LDLRAD1Q5T700 205 aa4.82□□□□□ -1.64
PDLIM5-218ENST00000513341 SUSD4Q5VX71 490 aa4.82□□□□□ -1.64
PDLIM5-218ENST00000513341 TDRD10Q5VZ19 366 aaKnown RBP4.82□□□□□ -1.64
PDLIM5-218ENST00000513341 DDX46Q7L014 1031 aaKnown RBP4.82□□□□□ -1.64
PDLIM5-218ENST00000513341 ZNF333Q96JL9 665 aa4.82□□□□□ -1.64
PDLIM5-218ENST00000513341 ZDHHC15Q96MV8 337 aa4.82□□□□□ -1.64
PDLIM5-218ENST00000513341 WRNIP1Q96S55 665 aa4.82□□□□□ -1.64
PDLIM5-218ENST00000513341 EYA3Q99504 573 aa4.82□□□□□ -1.64
PDLIM5-218ENST00000513341 PRO3102Q9H379 93 aa4.82□□□□□ -1.64
PDLIM5-218ENST00000513341 PANK3Q9H999 370 aa4.82□□□□□ -1.64
PDLIM5-218ENST00000513341 JADE2Q9NQC1 790 aa4.82□□□□□ -1.64
PDLIM5-218ENST00000513341 UBP1Q9NZI7 540 aa4.82□□□□□ -1.64
PDLIM5-218ENST00000513341 WHRNQ9P202 907 aa4.82□□□□□ -1.64
PDLIM5-218ENST00000513341 SIT1Q9Y3P8 196 aa4.82□□□□□ -1.64
PDLIM5-218ENST00000513341 NR2E3Q9Y5X4 410 aa4.82□□□□□ -1.64
PDLIM5-218ENST00000513341 ZNF609O15014 1411 aa4.81□□□□□ -1.64
PDLIM5-218ENST00000513341 ABCC12Q96J65 1359 aa4.81□□□□□ -1.64
PDLIM5-218ENST00000513341 ABCC4O15439 1325 aa4.81□□□□□ -1.64
PDLIM5-218ENST00000513341 SHTN1A0MZ66 631 aa4.81□□□□□ -1.64
PDLIM5-218ENST00000513341 C7orf72A4D263 438 aa4.81□□□□□ -1.64
PDLIM5-218ENST00000513341 KCNQ3O43525 872 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms