RNA–Protein interactions for RNA: ENST00000511732.1

COL1A1-213, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 789 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-213ENST00000511732 PI4K2BG5E9Z4 385 aa17.15■□□□□ 0.34
COL1A1-213ENST00000511732 GLP2RO95838 553 aa17.15■□□□□ 0.34
COL1A1-213ENST00000511732 PBX3P40426 434 aa17.15■□□□□ 0.34
COL1A1-213ENST00000511732 NRIP1P48552 1158 aa17.15■□□□□ 0.34
COL1A1-213ENST00000511732 DNM2P50570 870 aa17.15■□□□□ 0.34
COL1A1-213ENST00000511732 CDC42EP1Q00587 391 aa17.15■□□□□ 0.34
COL1A1-213ENST00000511732 UBE3AQ05086 875 aa17.15■□□□□ 0.34
COL1A1-213ENST00000511732 ZP2Q05996 745 aa17.15■□□□□ 0.34
COL1A1-213ENST00000511732 NCAPH2Q6IBW4 605 aa17.15■□□□□ 0.34
COL1A1-213ENST00000511732 ZNF410Q86VK4 478 aa17.15■□□□□ 0.34
COL1A1-213ENST00000511732 C4orf19Q8IY42 314 aa17.15■□□□□ 0.34
COL1A1-213ENST00000511732 THNSL1Q8IYQ7 743 aa17.15■□□□□ 0.34
COL1A1-213ENST00000511732 EFHBQ8N7U6 833 aa17.15■□□□□ 0.34
COL1A1-213ENST00000511732 RNF169Q8NCN4 708 aa17.15■□□□□ 0.34
COL1A1-213ENST00000511732 DYDC2Q96IM9 177 aa17.15■□□□□ 0.34
COL1A1-213ENST00000511732 CEP170P1Q96L14 293 aa17.15■□□□□ 0.34
COL1A1-213ENST00000511732 NLRP4Q96MN2 994 aa17.15■□□□□ 0.34
COL1A1-213ENST00000511732 NAP1L4Q99733 375 aaKnown RBP17.15■□□□□ 0.34
COL1A1-213ENST00000511732 DHX33Q9H6R0 707 aaKnown RBP17.15■□□□□ 0.34
COL1A1-213ENST00000511732 IFT122Q9HBG6 1241 aa17.15■□□□□ 0.34
COL1A1-213ENST00000511732 TLR9Q9NR96 1032 aa17.15■□□□□ 0.34
COL1A1-213ENST00000511732 BMP2KQ9NSY1 1161 aaPredicted RBP17.15■□□□□ 0.34
COL1A1-213ENST00000511732 BDP1A6H8Y1 2624 aa17.15■□□□□ 0.34
COL1A1-213ENST00000511732 FSCN2O14926 492 aa17.14■□□□□ 0.33
COL1A1-213ENST00000511732 PER2O15055 1255 aa17.14■□□□□ 0.33
COL1A1-213ENST00000511732 HOXA2O43364 376 aa17.14■□□□□ 0.33
COL1A1-213ENST00000511732 MARCH6O60337 910 aa17.14■□□□□ 0.33
COL1A1-213ENST00000511732 EOMESO95936 686 aa17.14■□□□□ 0.33
COL1A1-213ENST00000511732 LAG3P18627 525 aa17.14■□□□□ 0.33
COL1A1-213ENST00000511732 YWHABP31946 246 aaKnown RBP17.14■□□□□ 0.33
COL1A1-213ENST00000511732 SSTR3P32745 418 aaPredicted RBP17.14■□□□□ 0.33
COL1A1-213ENST00000511732 NDUFV1P49821 464 aa17.14■□□□□ 0.33
COL1A1-213ENST00000511732 RBM10P98175 930 aaKnown RBP17.14■□□□□ 0.33
COL1A1-213ENST00000511732 CYP4A11Q02928 519 aa17.14■□□□□ 0.33
COL1A1-213ENST00000511732 CTTNQ14247 550 aaKnown RBP17.14■□□□□ 0.33
COL1A1-213ENST00000511732 SMAD2Q15796 467 aaKnown RBP17.14■□□□□ 0.33
COL1A1-213ENST00000511732 KCNT2Q6UVM3 1135 aa17.14■□□□□ 0.33
COL1A1-213ENST00000511732 DIS3L2Q8IYB7 885 aaKnown RBP17.14■□□□□ 0.33
COL1A1-213ENST00000511732 LRRC43Q8N309 656 aa17.14■□□□□ 0.33
COL1A1-213ENST00000511732 HELQQ8TDG4 1101 aa17.14■□□□□ 0.33
COL1A1-213ENST00000511732 MICAL1Q8TDZ2 1067 aa17.14■□□□□ 0.33
COL1A1-213ENST00000511732 LRFN3Q9BTN0 628 aa17.14■□□□□ 0.33
COL1A1-213ENST00000511732 CHST12Q9NRB3 414 aa17.14■□□□□ 0.33
COL1A1-213ENST00000511732 DACT1Q9NYF0 836 aa17.14■□□□□ 0.33
COL1A1-213ENST00000511732 C19orf67A6NJJ6 358 aa17.13■□□□□ 0.33
COL1A1-213ENST00000511732 MEIS3P2A8K0S8 358 aa17.13■□□□□ 0.33
COL1A1-213ENST00000511732 DKC1O60832 514 aaKnown RBP eCLIP17.13■□□□□ 0.33
COL1A1-213ENST00000511732 SLITRK3O94933 977 aa17.13■□□□□ 0.33
COL1A1-213ENST00000511732 SFPQP23246 707 aaKnown RBP eCLIP17.13■□□□□ 0.33
COL1A1-213ENST00000511732 PHKA2P46019 1235 aa17.13■□□□□ 0.33
COL1A1-213ENST00000511732 PLCB3Q01970 1234 aa17.13■□□□□ 0.33
COL1A1-213ENST00000511732 SMAD4Q13485 552 aaKnown RBP17.13■□□□□ 0.33
COL1A1-213ENST00000511732 CSPP1Q1MSJ5 1256 aa17.13■□□□□ 0.33
COL1A1-213ENST00000511732 SLFN12Q8IYM2 578 aa17.13■□□□□ 0.33
COL1A1-213ENST00000511732 ABI1Q8IZP0 508 aa17.13■□□□□ 0.33
COL1A1-213ENST00000511732 VN1R2Q8NFZ6 395 aa17.13■□□□□ 0.33
COL1A1-213ENST00000511732 MRPS27Q92552 414 aaKnown RBP17.13■□□□□ 0.33
COL1A1-213ENST00000511732 LPPQ93052 612 aa17.13■□□□□ 0.33
COL1A1-213ENST00000511732 PPP2R3CQ969Q6 453 aa17.13■□□□□ 0.33
COL1A1-213ENST00000511732 TMEM143Q96AN5 459 aa17.13■□□□□ 0.33
COL1A1-213ENST00000511732 JPH2Q9BR39 696 aaPredicted RBP17.13■□□□□ 0.33
COL1A1-213ENST00000511732 TRAIPQ9BWF2 469 aa17.13■□□□□ 0.33
COL1A1-213ENST00000511732 BRMS1Q9HCU9 246 aa17.13■□□□□ 0.33
COL1A1-213ENST00000511732 PRKAG3Q9UGI9 489 aa17.13■□□□□ 0.33
COL1A1-213ENST00000511732 CD207Q9UJ71 328 aa17.13■□□□□ 0.33
COL1A1-213ENST00000511732 BARX2Q9UMQ3 279 aaPredicted RBP17.13■□□□□ 0.33
COL1A1-213ENST00000511732 FAM50BQ9Y247 325 aa17.13■□□□□ 0.33
COL1A1-213ENST00000511732 COL4A3BPQ9Y5P4 624 aa17.13■□□□□ 0.33
COL1A1-213ENST00000511732 FAM86C2PA6NEL3 165 aa17.12■□□□□ 0.33
COL1A1-213ENST00000511732 BAG4O95429 457 aaKnown RBP17.12■□□□□ 0.33
COL1A1-213ENST00000511732 POLGP54098 1239 aaPredicted RBP17.12■□□□□ 0.33
COL1A1-213ENST00000511732 LONRF3Q496Y0 759 aa17.12■□□□□ 0.33
COL1A1-213ENST00000511732 ADHFE1Q8IWW8 467 aa17.12■□□□□ 0.33
COL1A1-213ENST00000511732 PRPF31Q8WWY3 499 aaKnown RBP17.12■□□□□ 0.33
COL1A1-213ENST00000511732 SLC7A3Q8WY07 619 aa17.12■□□□□ 0.33
COL1A1-213ENST00000511732 INO80BQ9C086 356 aaPredicted RBP17.12■□□□□ 0.33
COL1A1-213ENST00000511732 ZSWIM4Q9H7M6 989 aa17.12■□□□□ 0.33
COL1A1-213ENST00000511732 TLE6Q9H808 572 aa17.12■□□□□ 0.33
COL1A1-213ENST00000511732 MINDY3Q9H8M7 445 aa17.12■□□□□ 0.33
COL1A1-213ENST00000511732 PIN4Q9Y237 131 aaKnown RBP17.12■□□□□ 0.33
COL1A1-213ENST00000511732 LZTS1Q9Y250 596 aa17.12■□□□□ 0.33
COL1A1-213ENST00000511732 EYA4O95677 639 aa17.11■□□□□ 0.33
COL1A1-213ENST00000511732 SRGAP2CP0DJJ0 459 aa17.11■□□□□ 0.33
COL1A1-213ENST00000511732 RFC5P40937 340 aa17.11■□□□□ 0.33
COL1A1-213ENST00000511732 CALCRLQ16602 461 aa17.11■□□□□ 0.33
COL1A1-213ENST00000511732 DUSP6Q16828 381 aa17.11■□□□□ 0.33
COL1A1-213ENST00000511732 XKR9Q5GH70 373 aa17.11■□□□□ 0.33
COL1A1-213ENST00000511732 PLPP4Q5VZY2 271 aa17.11■□□□□ 0.33
COL1A1-213ENST00000511732 TWF2Q6IBS0 349 aaKnown RBP17.11■□□□□ 0.33
COL1A1-213ENST00000511732 CATSPER4Q7RTX7 472 aa17.11■□□□□ 0.33
COL1A1-213ENST00000511732 TPH2Q8IWU9 490 aa17.11■□□□□ 0.33
COL1A1-213ENST00000511732 ZNF558Q96NG5 402 aa17.11■□□□□ 0.33
COL1A1-213ENST00000511732 MTMR9Q96QG7 549 aa17.11■□□□□ 0.33
COL1A1-213ENST00000511732 HSD17B14Q9BPX1 270 aa17.11■□□□□ 0.33
COL1A1-213ENST00000511732 TCF25Q9BQ70 676 aa17.11■□□□□ 0.33
COL1A1-213ENST00000511732 EIF2AK1Q9BQI3 630 aaKnown RBP17.11■□□□□ 0.33
COL1A1-213ENST00000511732 XPNPEP1Q9NQW7 623 aa17.11■□□□□ 0.33
COL1A1-213ENST00000511732 FAM105AQ9NUU6 356 aa17.11■□□□□ 0.33
COL1A1-213ENST00000511732 PCDHA12Q9UN75 941 aa17.11■□□□□ 0.33
COL1A1-213ENST00000511732 PPME1Q9Y570 386 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms