RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 PRAG1Q86YV5 1406 aa5.03□□□□□ -1.6
TOPBP1-208ENST00000511439 LRG1P02750 347 aa5.02□□□□□ -1.61
TOPBP1-208ENST00000511439 ASLP04424 464 aa5.02□□□□□ -1.61
TOPBP1-208ENST00000511439 CHGBP05060 677 aa5.02□□□□□ -1.61
TOPBP1-208ENST00000511439 CKMP06732 381 aa5.02□□□□□ -1.61
TOPBP1-208ENST00000511439 IGFALSP35858 605 aa5.02□□□□□ -1.61
TOPBP1-208ENST00000511439 CTCFP49711 727 aaPredicted RBP5.02□□□□□ -1.61
TOPBP1-208ENST00000511439 ZNF460Q14592 562 aa5.02□□□□□ -1.61
TOPBP1-208ENST00000511439 SLC15A2Q16348 729 aa5.02□□□□□ -1.61
TOPBP1-208ENST00000511439 TM4SF20Q53R12 229 aa5.02□□□□□ -1.61
TOPBP1-208ENST00000511439 TAF7LQ5H9L4 462 aa5.02□□□□□ -1.61
TOPBP1-208ENST00000511439 SLFN13Q68D06 897 aa5.02□□□□□ -1.61
TOPBP1-208ENST00000511439 ABHD17CQ6PCB6 329 aa5.02□□□□□ -1.61
TOPBP1-208ENST00000511439 TRMT10BQ6PF06 316 aaKnown RBP5.02□□□□□ -1.61
TOPBP1-208ENST00000511439 OTOP3Q7RTS5 596 aa5.02□□□□□ -1.61
TOPBP1-208ENST00000511439 ZC3H7AQ8IWR0 971 aaKnown RBP5.02□□□□□ -1.61
TOPBP1-208ENST00000511439 DHX37Q8IY37 1157 aaKnown RBP5.02□□□□□ -1.61
TOPBP1-208ENST00000511439 KBTBD2Q8IY47 623 aa5.02□□□□□ -1.61
TOPBP1-208ENST00000511439 MBD6Q96DN6 1003 aa5.02□□□□□ -1.61
TOPBP1-208ENST00000511439 MFSD3Q96ES6 412 aa5.02□□□□□ -1.61
TOPBP1-208ENST00000511439 SLC6A20Q9NP91 592 aa5.02□□□□□ -1.61
TOPBP1-208ENST00000511439 JADE2Q9NQC1 790 aa5.02□□□□□ -1.61
TOPBP1-208ENST00000511439 ASH2LQ9UBL3 628 aa5.02□□□□□ -1.61
TOPBP1-208ENST00000511439 TNPO3Q9Y5L0 923 aaKnown RBP5.02□□□□□ -1.61
TOPBP1-208ENST00000511439 SBNO2Q9Y2G9 1366 aa5.02□□□□□ -1.61
TOPBP1-208ENST00000511439 B4E1Z4 1266 aa5.01□□□□□ -1.61
TOPBP1-208ENST00000511439 GSTA4O15217 222 aa5.01□□□□□ -1.61
TOPBP1-208ENST00000511439 FOXN1O15353 648 aa5.01□□□□□ -1.61
TOPBP1-208ENST00000511439 OPA1O60313 960 aa5.01□□□□□ -1.61
TOPBP1-208ENST00000511439 SRGAP2CP0DJJ0 459 aa5.01□□□□□ -1.61
TOPBP1-208ENST00000511439 GDF5P43026 501 aa5.01□□□□□ -1.61
TOPBP1-208ENST00000511439 MLLT6P55198 1093 aaPredicted RBP5.01□□□□□ -1.61
TOPBP1-208ENST00000511439 SPIRE1Q08AE8 756 aa5.01□□□□□ -1.61
TOPBP1-208ENST00000511439 NFATC3Q12968 1075 aa5.01□□□□□ -1.61
TOPBP1-208ENST00000511439 HABP4Q5JVS0 413 aaKnown RBP5.01□□□□□ -1.61
TOPBP1-208ENST00000511439 VASNQ6EMK4 673 aa5.01□□□□□ -1.61
TOPBP1-208ENST00000511439 ZNF662Q6ZS27 426 aa5.01□□□□□ -1.61
TOPBP1-208ENST00000511439 C16orf59Q7L2K0 433 aa5.01□□□□□ -1.61
TOPBP1-208ENST00000511439 LRRTM3Q86VH5 581 aa5.01□□□□□ -1.61
TOPBP1-208ENST00000511439 SH3RF3Q8TEJ3 882 aaPredicted RBP5.01□□□□□ -1.61
TOPBP1-208ENST00000511439 ZCCHC14Q8WYQ9 949 aaKnown RBP5.01□□□□□ -1.61
TOPBP1-208ENST00000511439 FBXW5Q969U6 566 aa5.01□□□□□ -1.61
TOPBP1-208ENST00000511439 KCNJ15Q99712 375 aa5.01□□□□□ -1.61
TOPBP1-208ENST00000511439 CELF4Q9BZC1 486 aaKnown RBP5.01□□□□□ -1.61
TOPBP1-208ENST00000511439 KLC2Q9H0B6 622 aa5.01□□□□□ -1.61
TOPBP1-208ENST00000511439 DEF6Q9H4E7 631 aa5.01□□□□□ -1.61
TOPBP1-208ENST00000511439 DLL4Q9NR61 685 aa5.01□□□□□ -1.61
TOPBP1-208ENST00000511439 SLC52A1Q9NWF4 448 aa5.01□□□□□ -1.61
TOPBP1-208ENST00000511439 TCAF1Q9Y4C2 921 aa5.01□□□□□ -1.61
TOPBP1-208ENST00000511439 SPATA31A3Q5VYP0 1347 aa5□□□□□ -1.61
TOPBP1-208ENST00000511439 CCDC144AA2RUR9 1427 aa5□□□□□ -1.61
TOPBP1-208ENST00000511439 A0A087X0B3 334 aa5□□□□□ -1.61
TOPBP1-208ENST00000511439 CCDC66A2RUB6 948 aa5□□□□□ -1.61
TOPBP1-208ENST00000511439 NPTXRO95502 500 aa5□□□□□ -1.61
TOPBP1-208ENST00000511439 FSHBP01225 129 aa5□□□□□ -1.61
TOPBP1-208ENST00000511439 PYGMP11217 842 aa5□□□□□ -1.61
TOPBP1-208ENST00000511439 GNAT1P11488 350 aa5□□□□□ -1.61
TOPBP1-208ENST00000511439 POU3F2P20265 443 aaPredicted RBP5□□□□□ -1.61
TOPBP1-208ENST00000511439 TACR2P21452 398 aa5□□□□□ -1.61
TOPBP1-208ENST00000511439 ST5P78524 1137 aa5□□□□□ -1.61
TOPBP1-208ENST00000511439 FAM47CQ5HY64 1035 aa5□□□□□ -1.61
TOPBP1-208ENST00000511439 ZCCHC8Q6NZY4 707 aaKnown RBP5□□□□□ -1.61
TOPBP1-208ENST00000511439 USP51Q70EK9 711 aa5□□□□□ -1.61
TOPBP1-208ENST00000511439 SLC16A11Q8NCK7 471 aa5□□□□□ -1.61
TOPBP1-208ENST00000511439 DNERQ8NFT8 737 aa5□□□□□ -1.61
TOPBP1-208ENST00000511439 PIP4K2CQ8TBX8 421 aa5□□□□□ -1.61
TOPBP1-208ENST00000511439 IGDCC4Q8TDY8 1250 aa5□□□□□ -1.61
TOPBP1-208ENST00000511439 GCC1Q96CN9 775 aa5□□□□□ -1.61
TOPBP1-208ENST00000511439 ADAM29Q9UKF5 820 aa5□□□□□ -1.61
TOPBP1-208ENST00000511439 CBLCQ9ULV8 474 aa5□□□□□ -1.61
TOPBP1-208ENST00000511439 COQ6Q9Y2Z9 468 aa5□□□□□ -1.61
TOPBP1-208ENST00000511439 PRKAB1Q9Y478 270 aa5□□□□□ -1.61
TOPBP1-208ENST00000511439 ZNF644Q9H582 1327 aaPredicted RBP4.99□□□□□ -1.61
TOPBP1-208ENST00000511439 TOPAZ1Q8N9V7 1692 aa4.99□□□□□ -1.61
TOPBP1-208ENST00000511439 TCRBV5S4A2TA0A5A2 114 aa4.99□□□□□ -1.61
TOPBP1-208ENST00000511439 NKRFO15226 690 aaKnown RBP eCLIP4.99□□□□□ -1.61
TOPBP1-208ENST00000511439 GPR42O15529 346 aa4.99□□□□□ -1.61
TOPBP1-208ENST00000511439 B4GALT4O60513 344 aa4.99□□□□□ -1.61
TOPBP1-208ENST00000511439 FBXO21O94952 628 aa4.99□□□□□ -1.61
TOPBP1-208ENST00000511439 JMJD7P0C870 316 aa4.99□□□□□ -1.61
TOPBP1-208ENST00000511439 COL6A2P12110 1019 aa4.99□□□□□ -1.61
TOPBP1-208ENST00000511439 C6P13671 934 aa4.99□□□□□ -1.61
TOPBP1-208ENST00000511439 PDE6AP16499 860 aa4.99□□□□□ -1.61
TOPBP1-208ENST00000511439 FLT3P36888 993 aa4.99□□□□□ -1.61
TOPBP1-208ENST00000511439 MASP1P48740 699 aa4.99□□□□□ -1.61
TOPBP1-208ENST00000511439 SELENOPP49908 381 aa4.99□□□□□ -1.61
TOPBP1-208ENST00000511439 LACTBP83111 547 aaPredicted RBP4.99□□□□□ -1.61
TOPBP1-208ENST00000511439 ICAM4Q14773 271 aa4.99□□□□□ -1.61
TOPBP1-208ENST00000511439 SMAD2Q15796 467 aaKnown RBP4.99□□□□□ -1.61
TOPBP1-208ENST00000511439 CRY1Q16526 586 aa4.99□□□□□ -1.61
TOPBP1-208ENST00000511439 TMC5Q6UXY8 1006 aa4.99□□□□□ -1.61
TOPBP1-208ENST00000511439 OVCH1Q7RTY7 1134 aa4.99□□□□□ -1.61
TOPBP1-208ENST00000511439 IGSF22Q8N9C0 903 aa4.99□□□□□ -1.61
TOPBP1-208ENST00000511439 UHMK1Q8TAS1 419 aaKnown RBP4.99□□□□□ -1.61
TOPBP1-208ENST00000511439 SORCS2Q96PQ0 1159 aa4.99□□□□□ -1.61
TOPBP1-208ENST00000511439 TARS2Q9BW92 718 aaKnown RBP4.99□□□□□ -1.61
TOPBP1-208ENST00000511439 TMX1Q9H3N1 280 aa4.99□□□□□ -1.61
TOPBP1-208ENST00000511439 CD248Q9HCU0 757 aa4.99□□□□□ -1.61
TOPBP1-208ENST00000511439 CATSPERZQ9NTU4 200 aa4.99□□□□□ -1.61
TOPBP1-208ENST00000511439 SAMD15Q9P1V8 674 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms