RNA–Protein interactions for RNA: ENST00000511423.5

CDH18-211, Transcript of cadherin 18, humanhuman

TSL 4

Gene CDH18, Length 562 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH18-211ENST00000511423 RGPD5Q99666 1765 aa4.42□□□□□ -1.7
CDH18-211ENST00000511423 NSD2O96028 1365 aa4.41□□□□□ -1.7
CDH18-211ENST00000511423 C4BP0C0L5 1744 aa4.41□□□□□ -1.7
CDH18-211ENST00000511423 DOT1LQ8TEK3 1739 aa4.41□□□□□ -1.7
CDH18-211ENST00000511423 TCRBV5S4A2TA0A5A2 114 aa4.41□□□□□ -1.7
CDH18-211ENST00000511423 FAM221BA6H8Z2 402 aa4.41□□□□□ -1.7
CDH18-211ENST00000511423 DGKIO75912 1065 aa4.41□□□□□ -1.7
CDH18-211ENST00000511423 GCP02774 474 aa4.41□□□□□ -1.7
CDH18-211ENST00000511423 PTMAP06454 111 aaKnown RBP4.41□□□□□ -1.7
CDH18-211ENST00000511423 MCCP23508 829 aa4.41□□□□□ -1.7
CDH18-211ENST00000511423 HMGB2P26583 209 aaKnown RBP4.41□□□□□ -1.7
CDH18-211ENST00000511423 FAM26FQ5R3K3 315 aa4.41□□□□□ -1.7
CDH18-211ENST00000511423 CKAP2LQ8IYA6 745 aa4.41□□□□□ -1.7
CDH18-211ENST00000511423 LRRC47Q8N1G4 583 aaKnown RBP4.41□□□□□ -1.7
CDH18-211ENST00000511423 NGDNQ8NEJ9 315 aaKnown RBP4.41□□□□□ -1.7
CDH18-211ENST00000511423 SH3RF2Q8TEC5 729 aa4.41□□□□□ -1.7
CDH18-211ENST00000511423 ZCCHC14Q8WYQ9 949 aaKnown RBP4.41□□□□□ -1.7
CDH18-211ENST00000511423 TOE1Q96GM8 510 aaKnown RBP4.41□□□□□ -1.7
CDH18-211ENST00000511423 EXOC2Q96KP1 924 aa4.41□□□□□ -1.7
CDH18-211ENST00000511423 NGRNQ9NPE2 291 aaKnown RBP4.41□□□□□ -1.7
CDH18-211ENST00000511423 SIRPGQ9P1W8 387 aa4.41□□□□□ -1.7
CDH18-211ENST00000511423 RBPJLQ9UBG7 517 aa4.41□□□□□ -1.7
CDH18-211ENST00000511423 RBBP6Q7Z6E9 1792 aaKnown RBP4.4□□□□□ -1.7
CDH18-211ENST00000511423 NSD3Q9BZ95 1437 aa4.4□□□□□ -1.7
CDH18-211ENST00000511423 BAHCC1Q9P281 2608 aa4.4□□□□□ -1.7
CDH18-211ENST00000511423 SLC27A2O14975 620 aa4.4□□□□□ -1.71
CDH18-211ENST00000511423 NKRFO15226 690 aaKnown RBP eCLIP4.4□□□□□ -1.71
CDH18-211ENST00000511423 FAM153BP0C7A2 387 aa4.4□□□□□ -1.71
CDH18-211ENST00000511423 GRK2P25098 689 aa4.4□□□□□ -1.71
CDH18-211ENST00000511423 GRK3P35626 688 aa4.4□□□□□ -1.71
CDH18-211ENST00000511423 EPHA5P54756 1037 aa4.4□□□□□ -1.71
CDH18-211ENST00000511423 MLLT6P55198 1093 aaPredicted RBP4.4□□□□□ -1.71
CDH18-211ENST00000511423 KIZQ2M2Z5 673 aa4.4□□□□□ -1.71
CDH18-211ENST00000511423 DALRD3Q5D0E6 543 aaKnown RBP4.4□□□□□ -1.71
CDH18-211ENST00000511423 SMIM5Q71RC9 77 aa4.4□□□□□ -1.71
CDH18-211ENST00000511423 LRP10Q7Z4F1 713 aa4.4□□□□□ -1.71
CDH18-211ENST00000511423 ZC3H18Q86VM9 953 aaKnown RBP4.4□□□□□ -1.71
CDH18-211ENST00000511423 RBM12BQ8IXT5 1001 aaKnown RBP4.4□□□□□ -1.71
CDH18-211ENST00000511423 ZBTB38Q8NAP3 1195 aaPredicted RBP4.4□□□□□ -1.71
CDH18-211ENST00000511423 KISS1RQ969F8 398 aaPredicted RBP4.4□□□□□ -1.71
CDH18-211ENST00000511423 FAM122AQ96E09 287 aa4.4□□□□□ -1.71
CDH18-211ENST00000511423 KRTAP3-1Q9BYR8 98 aa4.4□□□□□ -1.71
CDH18-211ENST00000511423 TANGO6Q9C0B7 1094 aa4.4□□□□□ -1.71
CDH18-211ENST00000511423 PRDM16Q9HAZ2 1276 aa4.4□□□□□ -1.71
CDH18-211ENST00000511423 ABT1Q9ULW3 272 aaKnown RBP4.4□□□□□ -1.71
CDH18-211ENST00000511423 HTTP42858 3142 aa4.4□□□□□ -1.71
CDH18-211ENST00000511423 C4AP0C0L4 1744 aa4.4□□□□□ -1.71
CDH18-211ENST00000511423 MUC6Q6W4X9 2439 aa4.4□□□□□ -1.71
CDH18-211ENST00000511423 ANKRD36BQ8N2N9 1353 aa4.4□□□□□ -1.71
CDH18-211ENST00000511423 TRPM7Q96QT4 1865 aa4.39□□□□□ -1.71
CDH18-211ENST00000511423 SMARCA5O60264 1052 aaPredicted RBP4.39□□□□□ -1.71
CDH18-211ENST00000511423 LTFP02788 710 aa4.39□□□□□ -1.71
CDH18-211ENST00000511423 ITGB3P05106 788 aa4.39□□□□□ -1.71
CDH18-211ENST00000511423 MMP10P09238 476 aa4.39□□□□□ -1.71
CDH18-211ENST00000511423 NKX3-2P78367 333 aa4.39□□□□□ -1.71
CDH18-211ENST00000511423 IFRD2Q12894 506 aaPredicted RBP4.39□□□□□ -1.71
CDH18-211ENST00000511423 FAM209AQ5JX71 171 aa4.39□□□□□ -1.71
CDH18-211ENST00000511423 PKN3Q6P5Z2 889 aa4.39□□□□□ -1.71
CDH18-211ENST00000511423 TTLL7Q6ZT98 887 aa4.39□□□□□ -1.71
CDH18-211ENST00000511423 FERMT3Q86UX7 667 aa4.39□□□□□ -1.71
CDH18-211ENST00000511423 IFNL3Q8IZI9 196 aa4.39□□□□□ -1.71
CDH18-211ENST00000511423 DTX3Q8N9I9 347 aa4.39□□□□□ -1.71
CDH18-211ENST00000511423 TXNDC5Q8NBS9 432 aaKnown RBP4.39□□□□□ -1.71
CDH18-211ENST00000511423 CHAMP1Q96JM3 812 aa4.39□□□□□ -1.71
CDH18-211ENST00000511423 TRIM55Q9BYV6 548 aa4.39□□□□□ -1.71
CDH18-211ENST00000511423 IPPKQ9H8X2 491 aa4.39□□□□□ -1.71
CDH18-211ENST00000511423 CNOT11Q9UKZ1 510 aaKnown RBP4.39□□□□□ -1.71
CDH18-211ENST00000511423 TRAF6Q9Y4K3 522 aa4.39□□□□□ -1.71
CDH18-211ENST00000511423 POLR3AO14802 1390 aaPredicted RBP4.39□□□□□ -1.71
CDH18-211ENST00000511423 CENPFP49454 3210 aa4.38□□□□□ -1.71
CDH18-211ENST00000511423 ACOT7O00154 380 aa4.38□□□□□ -1.71
CDH18-211ENST00000511423 ARVCFO00192 962 aa4.38□□□□□ -1.71
CDH18-211ENST00000511423 DDX3XO00571 662 aaKnown RBP eCLIP4.38□□□□□ -1.71
CDH18-211ENST00000511423 SOD2P04179 222 aa4.38□□□□□ -1.71
CDH18-211ENST00000511423 CELA3BP08861 270 aa4.38□□□□□ -1.71
CDH18-211ENST00000511423 COL6A2P12110 1019 aa4.38□□□□□ -1.71
CDH18-211ENST00000511423 FAHP16930 419 aa4.38□□□□□ -1.71
CDH18-211ENST00000511423 ATP2B1P20020 1258 aa4.38□□□□□ -1.71
CDH18-211ENST00000511423 CNR2P34972 360 aa4.38□□□□□ -1.71
CDH18-211ENST00000511423 GJA9P57773 515 aa4.38□□□□□ -1.71
CDH18-211ENST00000511423 ANAPC15P60006 121 aa4.38□□□□□ -1.71
CDH18-211ENST00000511423 TUSC3Q13454 348 aa4.38□□□□□ -1.71
CDH18-211ENST00000511423 LONRF2Q1L5Z9 754 aa4.38□□□□□ -1.71
CDH18-211ENST00000511423 RGL3Q3MIN7 710 aa4.38□□□□□ -1.71
CDH18-211ENST00000511423 CTU1Q7Z7A3 348 aaKnown RBP4.38□□□□□ -1.71
CDH18-211ENST00000511423 SCUBE1Q8IWY4 988 aa4.38□□□□□ -1.71
CDH18-211ENST00000511423 ZSWIM3Q96MP5 696 aa4.38□□□□□ -1.71
CDH18-211ENST00000511423 KRTAP4-5Q9BYR2 181 aa4.38□□□□□ -1.71
CDH18-211ENST00000511423 SNTG2Q9NY99 539 aa4.38□□□□□ -1.71
CDH18-211ENST00000511423 PFDN2Q9UHV9 154 aa4.38□□□□□ -1.71
CDH18-211ENST00000511423 NUP155O75694 1391 aa4.38□□□□□ -1.71
CDH18-211ENST00000511423 PIK3C2GO75747 1445 aa4.38□□□□□ -1.71
CDH18-211ENST00000511423 CPSF1Q10570 1443 aaKnown RBP4.38□□□□□ -1.71
CDH18-211ENST00000511423 CACNA1BQ00975 2339 aa4.37□□□□□ -1.71
CDH18-211ENST00000511423 TRBV23-1A0A0A0MS06 115 aa4.37□□□□□ -1.71
CDH18-211ENST00000511423 C9orf118A6NHY6 69 aa4.37□□□□□ -1.71
CDH18-211ENST00000511423 KRIT1O00522 736 aa4.37□□□□□ -1.71
CDH18-211ENST00000511423 MAFGO15525 162 aa4.37□□□□□ -1.71
CDH18-211ENST00000511423 B4GALT3O60512 393 aa4.37□□□□□ -1.71
CDH18-211ENST00000511423 KLHL18O94889 574 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms