RNA–Protein interactions for RNA: ENST00000511423.5

CDH18-211, Transcript of cadherin 18, humanhuman

TSL 4

Gene CDH18, Length 562 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH18-211ENST00000511423 AEBP2Q6ZN18 517 aaPredicted RBP18.54■□□□□ 0.56
CDH18-211ENST00000511423 CHIC1Q5VXU3 224 aa17.83■□□□□ 0.44
CDH18-211ENST00000511423 PHF23Q9BUL5 403 aaPredicted RBP15.72■□□□□ 0.11
CDH18-211ENST00000511423 SENP3Q9H4L4 574 aaPredicted RBP15.63■□□□□ 0.09
CDH18-211ENST00000511423 FOXD1Q16676 465 aa14.61□□□□□ -0.07
CDH18-211ENST00000511423 PLPPR3Q6T4P5 718 aa14.31□□□□□ -0.12
CDH18-211ENST00000511423 PPP6R1Q9UPN7 881 aa13.93□□□□□ -0.18
CDH18-211ENST00000511423 ADRA2BP18089 450 aa13.83□□□□□ -0.2
CDH18-211ENST00000511423 PIAS4Q8N2W9 510 aaPredicted RBP13.62□□□□□ -0.23
CDH18-211ENST00000511423 MSH5O43196 834 aa13.47□□□□□ -0.25
CDH18-211ENST00000511423 POTEDQ86YR6 584 aa12.72□□□□□ -0.37
CDH18-211ENST00000511423 MAPK8IP2Q13387 824 aaPredicted RBP12.64□□□□□ -0.39
CDH18-211ENST00000511423 PPP4R3CPQ6ZMV5 832 aa12.6□□□□□ -0.39
CDH18-211ENST00000511423 SCAF1Q9H7N4 1312 aaKnown RBP12.53□□□□□ -0.4
CDH18-211ENST00000511423 DMRT2Q9Y5R5 561 aa12.5□□□□□ -0.41
CDH18-211ENST00000511423 CNKSR2Q8WXI2 1034 aa12.28□□□□□ -0.44
CDH18-211ENST00000511423 HOXD11P31277 338 aaPredicted RBP12.18□□□□□ -0.46
CDH18-211ENST00000511423 RNF216Q9NWF9 866 aaPredicted RBP12.12□□□□□ -0.47
CDH18-211ENST00000511423 NCBP3Q53F19 620 aaKnown RBP12.11□□□□□ -0.47
CDH18-211ENST00000511423 KCNA4P22459 653 aa12.09□□□□□ -0.47
CDH18-211ENST00000511423 NPM3O75607 178 aaKnown RBP12.07□□□□□ -0.48
CDH18-211ENST00000511423 DNAJC5BQ9UF47 199 aa11.86□□□□□ -0.51
CDH18-211ENST00000511423 DCAF8L1A6NGE4 600 aa11.79□□□□□ -0.52
CDH18-211ENST00000511423 RNF39Q9H2S5 420 aa11.6□□□□□ -0.55
CDH18-211ENST00000511423 SLC4A2P04920 1241 aa11.5□□□□□ -0.57
CDH18-211ENST00000511423 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.45□□□□□ -0.58
CDH18-211ENST00000511423 SLC4A1APQ9BWU0 796 aaKnown RBP11.4□□□□□ -0.58
CDH18-211ENST00000511423 C1QBPQ07021 282 aaKnown RBP11.39□□□□□ -0.59
CDH18-211ENST00000511423 U3KPZ7 1027 aaPredicted RBP11.38□□□□□ -0.59
CDH18-211ENST00000511423 CACNB1Q02641 598 aaPredicted RBP11.33□□□□□ -0.6
CDH18-211ENST00000511423 ZBTB22O15209 634 aa11.2□□□□□ -0.62
CDH18-211ENST00000511423 FOXD4L1Q9NU39 408 aa11.16□□□□□ -0.62
CDH18-211ENST00000511423 SPINK5Q9NQ38 1064 aaPredicted RBP11.11□□□□□ -0.63
CDH18-211ENST00000511423 MYCNP04198 464 aaPredicted RBP11.09□□□□□ -0.63
CDH18-211ENST00000511423 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.02□□□□□ -0.65
CDH18-211ENST00000511423 HNRNPUL2Q1KMD3 747 aaKnown RBP11.02□□□□□ -0.65
CDH18-211ENST00000511423 SAMD1Q6SPF0 538 aaPredicted RBP11.01□□□□□ -0.65
CDH18-211ENST00000511423 CAPN15O75808 1086 aa10.96□□□□□ -0.65
CDH18-211ENST00000511423 DSG3P32926 999 aa10.95□□□□□ -0.66
CDH18-211ENST00000511423 APLP2Q06481 763 aa10.92□□□□□ -0.66
CDH18-211ENST00000511423 ATF5Q9Y2D1 282 aaPredicted RBP10.91□□□□□ -0.66
CDH18-211ENST00000511423 CSRNP3Q8WYN3 585 aa10.9□□□□□ -0.66
CDH18-211ENST00000511423 ZNF219Q9P2Y4 722 aaPredicted RBP10.87□□□□□ -0.67
CDH18-211ENST00000511423 TRHP20396 242 aaPredicted RBP10.86□□□□□ -0.67
CDH18-211ENST00000511423 EHMT2Q96KQ7 1210 aa10.8□□□□□ -0.68
CDH18-211ENST00000511423 ATXN8OSP0DMR3 200 aa10.79□□□□□ -0.68
CDH18-211ENST00000511423 ABCB7O75027 752 aa10.77□□□□□ -0.69
CDH18-211ENST00000511423 POLA2Q14181 598 aa10.68□□□□□ -0.7
CDH18-211ENST00000511423 MKRN4PQ13434 485 aaPredicted RBP10.44□□□□□ -0.74
CDH18-211ENST00000511423 ZBTB12Q9Y330 459 aaPredicted RBP10.44□□□□□ -0.74
CDH18-211ENST00000511423 OSCARQ8IYS5 282 aa10.36□□□□□ -0.75
CDH18-211ENST00000511423 RBM42Q9BTD8 480 aaKnown RBP10.33□□□□□ -0.76
CDH18-211ENST00000511423 FBLN2P98095 1184 aa10.28□□□□□ -0.76
CDH18-211ENST00000511423 AKT1S1Q96B36 256 aa10.21□□□□□ -0.77
CDH18-211ENST00000511423 SPDYE2BA6NHP3 402 aa10.2□□□□□ -0.78
CDH18-211ENST00000511423 SPDYE6P0CI01 402 aa10.2□□□□□ -0.78
CDH18-211ENST00000511423 SPDYE2Q495Y8 402 aa10.2□□□□□ -0.78
CDH18-211ENST00000511423 SSUH2Q9Y2M2 353 aa10.18□□□□□ -0.78
CDH18-211ENST00000511423 REM2Q8IYK8 340 aaPredicted RBP10.13□□□□□ -0.79
CDH18-211ENST00000511423 ZNF692Q9BU19 519 aaPredicted RBP10.08□□□□□ -0.8
CDH18-211ENST00000511423 CHRDL2Q6WN34 429 aa10.04□□□□□ -0.8
CDH18-211ENST00000511423 PITPNM1O00562 1244 aa10.03□□□□□ -0.8
CDH18-211ENST00000511423 POTEHQ6S545 545 aa9.99□□□□□ -0.81
CDH18-211ENST00000511423 SPDYE4A6NLX3 237 aa9.97□□□□□ -0.81
CDH18-211ENST00000511423 PABPN1Q86U42 306 aaKnown RBP eCLIP9.97□□□□□ -0.81
CDH18-211ENST00000511423 PROM2Q8N271 834 aa9.94□□□□□ -0.82
CDH18-211ENST00000511423 FXR2P51116 673 aaKnown RBP eCLIP9.92□□□□□ -0.82
CDH18-211ENST00000511423 SPDYE1Q8NFV5 336 aaPredicted RBP9.91□□□□□ -0.82
CDH18-211ENST00000511423 PIP4P2Q8N4L2 257 aa9.9□□□□□ -0.82
CDH18-211ENST00000511423 CLEC11AQ9Y240 323 aa9.83□□□□□ -0.84
CDH18-211ENST00000511423 FKBP8Q14318 412 aa9.77□□□□□ -0.85
CDH18-211ENST00000511423 PRR29P0C7W0 189 aa9.73□□□□□ -0.85
CDH18-211ENST00000511423 PRKAR2AP13861 404 aaKnown RBP9.73□□□□□ -0.85
CDH18-211ENST00000511423 STAG3Q9UJ98 1225 aa9.71□□□□□ -0.86
CDH18-211ENST00000511423 CHADLQ6NUI6 762 aa9.7□□□□□ -0.86
CDH18-211ENST00000511423 CREBZFQ9NS37 354 aa9.68□□□□□ -0.86
CDH18-211ENST00000511423 MNX1P50219 401 aaPredicted RBP9.61□□□□□ -0.87
CDH18-211ENST00000511423 EVX2Q03828 476 aa9.6□□□□□ -0.87
CDH18-211ENST00000511423 C19orf67A6NJJ6 358 aa9.59□□□□□ -0.87
CDH18-211ENST00000511423 FARP1Q9Y4F1 1045 aaPredicted RBP9.59□□□□□ -0.87
CDH18-211ENST00000511423 HAX1O00165 279 aa9.53□□□□□ -0.88
CDH18-211ENST00000511423 SP7Q8TDD2 431 aaPredicted RBP9.5□□□□□ -0.89
CDH18-211ENST00000511423 CD44P16070 742 aaKnown RBP9.43□□□□□ -0.9
CDH18-211ENST00000511423 FBXO3Q9UK99 471 aa9.43□□□□□ -0.9
CDH18-211ENST00000511423 MIER1Q8N108 512 aa9.41□□□□□ -0.9
CDH18-211ENST00000511423 NPM1P06748 294 aaKnown RBP eCLIP9.38□□□□□ -0.91
CDH18-211ENST00000511423 VASPP50552 380 aaPredicted RBP9.38□□□□□ -0.91
CDH18-211ENST00000511423 PLCD3Q8N3E9 789 aa9.36□□□□□ -0.91
CDH18-211ENST00000511423 ZNF579Q8NAF0 562 aaKnown RBP9.36□□□□□ -0.91
CDH18-211ENST00000511423 NUBP1P53384 320 aa9.35□□□□□ -0.91
CDH18-211ENST00000511423 GABBR2O75899 941 aa9.34□□□□□ -0.91
CDH18-211ENST00000511423 RASEFQ8IZ41 740 aa9.33□□□□□ -0.92
CDH18-211ENST00000511423 ZRANB1Q9UGI0 708 aa9.32□□□□□ -0.92
CDH18-211ENST00000511423 PLEKHG5O94827 1062 aa9.29□□□□□ -0.92
CDH18-211ENST00000511423 IFNLR1Q8IU57 520 aaPredicted RBP9.29□□□□□ -0.92
CDH18-211ENST00000511423 CCDC61Q9Y6R9 512 aa9.29□□□□□ -0.92
CDH18-211ENST00000511423 PHF12Q96QT6 1004 aa9.27□□□□□ -0.93
CDH18-211ENST00000511423 ZBTB47Q9UFB7 747 aaPredicted RBP9.27□□□□□ -0.93
CDH18-211ENST00000511423 TSPYL2Q9H2G4 693 aaPredicted RBP9.24□□□□□ -0.93
CDH18-211ENST00000511423 POTEIP0CG38 1075 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms