RNA–Protein interactions for RNA: ENST00000510626.5

HTT-208, Transcript of huntingtin, humanhuman

TSL 1 (best)

Gene HTT, Length 14,438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-208ENST00000510626 CDY1Q9Y6F8 540 aa8.9□□□□□ -0.98
HTT-208ENST00000510626 C4orf22Q6V702 233 aa8.9□□□□□ -0.98
HTT-208ENST00000510626 RSPH1Q8WYR4 309 aa8.9□□□□□ -0.98
HTT-208ENST00000510626 ETAA1Q9NY74 926 aa8.9□□□□□ -0.98
HTT-208ENST00000510626 ZBED1O96006 694 aa8.9□□□□□ -0.98
HTT-208ENST00000510626 PDHA1P08559 390 aa8.9□□□□□ -0.98
HTT-208ENST00000510626 TUBA3CQ13748 450 aa8.9□□□□□ -0.98
HTT-208ENST00000510626 COL23A1Q86Y22 540 aaPredicted RBP8.9□□□□□ -0.98
HTT-208ENST00000510626 KCND2Q9NZV8 630 aa8.9□□□□□ -0.98
HTT-208ENST00000510626 FAM25AB3EWG3 89 aa8.9□□□□□ -0.99
HTT-208ENST00000510626 FAM25CB3EWG5 89 aa8.9□□□□□ -0.99
HTT-208ENST00000510626 FAM25GB3EWG6 89 aa8.9□□□□□ -0.99
HTT-208ENST00000510626 KRT6AP02538 564 aa8.9□□□□□ -0.99
HTT-208ENST00000510626 KRT6BP04259 564 aa8.9□□□□□ -0.99
HTT-208ENST00000510626 KCNA3P22001 575 aa8.9□□□□□ -0.99
HTT-208ENST00000510626 ARFIP2P53365 341 aa8.9□□□□□ -0.99
HTT-208ENST00000510626 ATP6V1E2Q96A05 226 aa8.9□□□□□ -0.99
HTT-208ENST00000510626 FAR2Q96K12 515 aa8.9□□□□□ -0.99
HTT-208ENST00000510626 RSL24D1Q9UHA3 163 aaKnown RBP8.9□□□□□ -0.99
HTT-208ENST00000510626 SORCS3Q9UPU3 1222 aa8.9□□□□□ -0.99
HTT-208ENST00000510626 SPATA4Q8NEY3 305 aa8.9□□□□□ -0.99
HTT-208ENST00000510626 TSC22D4Q9Y3Q8 395 aa8.9□□□□□ -0.99
HTT-208ENST00000510626 UFL1O94874 794 aa8.9□□□□□ -0.99
HTT-208ENST00000510626 SLCO1A2P46721 670 aa8.9□□□□□ -0.99
HTT-208ENST00000510626 MIS18BP1Q6P0N0 1132 aa8.9□□□□□ -0.99
HTT-208ENST00000510626 ZNF555Q8NEP9 628 aa8.9□□□□□ -0.99
HTT-208ENST00000510626 AHCYL1O43865 530 aa8.9□□□□□ -0.99
HTT-208ENST00000510626 ITPRIPL1Q6GPH6 555 aa8.9□□□□□ -0.99
HTT-208ENST00000510626 VCPKMTQ9H867 229 aa8.9□□□□□ -0.99
HTT-208ENST00000510626 ST7Q9NRC1 585 aa8.9□□□□□ -0.99
HTT-208ENST00000510626 ZFATQ9P243 1243 aa8.9□□□□□ -0.99
HTT-208ENST00000510626 FAM173BQ6P4H8 233 aa8.89□□□□□ -0.99
HTT-208ENST00000510626 KIAA2013Q8IYS2 634 aa8.89□□□□□ -0.99
HTT-208ENST00000510626 MYH6P13533 1939 aa8.89□□□□□ -0.99
HTT-208ENST00000510626 ALX1Q15699 326 aa8.89□□□□□ -0.99
HTT-208ENST00000510626 ZFP1Q6P2D0 407 aa8.89□□□□□ -0.99
HTT-208ENST00000510626 PALD1Q9ULE6 856 aa8.89□□□□□ -0.99
HTT-208ENST00000510626 WDR17Q8IZU2 1322 aa8.89□□□□□ -0.99
HTT-208ENST00000510626 BTBD18B2RXH4 712 aa8.89□□□□□ -0.99
HTT-208ENST00000510626 HSPA4LO95757 839 aa8.89□□□□□ -0.99
HTT-208ENST00000510626 DLATP10515 647 aaKnown RBP8.89□□□□□ -0.99
HTT-208ENST00000510626 GHRP10912 638 aa8.89□□□□□ -0.99
HTT-208ENST00000510626 AP3M2P53677 418 aa8.89□□□□□ -0.99
HTT-208ENST00000510626 NSL1Q96IY1 281 aa8.89□□□□□ -0.99
HTT-208ENST00000510626 UBE2TQ9NPD8 197 aaPredicted RBP8.89□□□□□ -0.99
HTT-208ENST00000510626 ANXA1P04083 346 aa8.89□□□□□ -0.99
HTT-208ENST00000510626 PSMC1P62191 440 aaKnown RBP8.89□□□□□ -0.99
HTT-208ENST00000510626 GUCY1A3Q02108 690 aa8.89□□□□□ -0.99
HTT-208ENST00000510626 SNX12Q9UMY4 172 aa8.89□□□□□ -0.99
HTT-208ENST00000510626 ATP11BQ9Y2G3 1177 aa8.89□□□□□ -0.99
HTT-208ENST00000510626 XKR9Q5GH70 373 aa8.89□□□□□ -0.99
HTT-208ENST00000510626 IKBIPQ70UQ0 350 aa8.89□□□□□ -0.99
HTT-208ENST00000510626 TRMT1LQ7Z2T5 733 aaKnown RBP8.89□□□□□ -0.99
HTT-208ENST00000510626 CDC42BPAQ5VT25 1732 aa8.89□□□□□ -0.99
HTT-208ENST00000510626 ABCA9Q8IUA7 1624 aa8.89□□□□□ -0.99
HTT-208ENST00000510626 TCP11X1B4DZS4 312 aa8.89□□□□□ -0.99
HTT-208ENST00000510626 RAB14P61106 215 aa8.89□□□□□ -0.99
HTT-208ENST00000510626 PICALMQ13492 652 aa8.89□□□□□ -0.99
HTT-208ENST00000510626 JDP2Q8WYK2 163 aa8.89□□□□□ -0.99
HTT-208ENST00000510626 TSPAN17Q96FV3 270 aa8.89□□□□□ -0.99
HTT-208ENST00000510626 HNRNPDLO14979 420 aaKnown RBP8.89□□□□□ -0.99
HTT-208ENST00000510626 ZBTB24O43167 697 aaPredicted RBP8.89□□□□□ -0.99
HTT-208ENST00000510626 HNRNPH1P31943 449 aaKnown RBP8.89□□□□□ -0.99
HTT-208ENST00000510626 HIF1AQ16665 826 aa8.89□□□□□ -0.99
HTT-208ENST00000510626 FAM9CQ8IZT9 166 aa8.89□□□□□ -0.99
HTT-208ENST00000510626 RWDD3Q9Y3V2 267 aa8.89□□□□□ -0.99
HTT-208ENST00000510626 PNMA8CA0A1B0GUJ8 204 aa8.89□□□□□ -0.99
HTT-208ENST00000510626 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.89□□□□□ -0.99
HTT-208ENST00000510626 KBTBD12Q3ZCT8 623 aa8.89□□□□□ -0.99
HTT-208ENST00000510626 DHX40Q8IX18 779 aaKnown RBP8.89□□□□□ -0.99
HTT-208ENST00000510626 KIAA1024Q9UPX6 916 aa8.89□□□□□ -0.99
HTT-208ENST00000510626 PRDM15P57071 1507 aaPredicted RBP8.89□□□□□ -0.99
HTT-208ENST00000510626 LPXNO60711 386 aa8.89□□□□□ -0.99
HTT-208ENST00000510626 NCAPG2Q86XI2 1143 aa8.89□□□□□ -0.99
HTT-208ENST00000510626 GUF1Q8N442 669 aaKnown RBP8.89□□□□□ -0.99
HTT-208ENST00000510626 PSMC3IPQ9P2W1 217 aaPredicted RBP8.89□□□□□ -0.99
HTT-208ENST00000510626 MYO5CQ9NQX4 1742 aa8.89□□□□□ -0.99
HTT-208ENST00000510626 A0A1W2PQJ5 194 aa8.89□□□□□ -0.99
HTT-208ENST00000510626 CCDC15Q0P6D6 951 aa8.89□□□□□ -0.99
HTT-208ENST00000510626 CASP10Q92851 521 aa8.89□□□□□ -0.99
HTT-208ENST00000510626 MRPS26Q9BYN8 205 aaKnown RBP8.89□□□□□ -0.99
HTT-208ENST00000510626 NUMA1Q14980 2115 aa8.89□□□□□ -0.99
HTT-208ENST00000510626 CFAP69A5D8W1 941 aa8.88□□□□□ -0.99
HTT-208ENST00000510626 CDC27P30260 824 aa8.88□□□□□ -0.99
HTT-208ENST00000510626 STAG2Q8N3U4 1231 aa8.88□□□□□ -0.99
HTT-208ENST00000510626 CYFIP2Q96F07 1278 aa8.88□□□□□ -0.99
HTT-208ENST00000510626 RANBP17Q9H2T7 1088 aaKnown RBP8.88□□□□□ -0.99
HTT-208ENST00000510626 UVRAGQ9P2Y5 699 aa8.88□□□□□ -0.99
HTT-208ENST00000510626 ZBTB21Q9ULJ3 1066 aa8.88□□□□□ -0.99
HTT-208ENST00000510626 ATICP31939 592 aa8.88□□□□□ -0.99
HTT-208ENST00000510626 TIMM10P62072 90 aa8.88□□□□□ -0.99
HTT-208ENST00000510626 UGP2Q16851 508 aa8.88□□□□□ -0.99
HTT-208ENST00000510626 PATL1Q86TB9 770 aaKnown RBP8.88□□□□□ -0.99
HTT-208ENST00000510626 NDUFAF2Q8N183 169 aa8.88□□□□□ -0.99
HTT-208ENST00000510626 PCDHA1Q9Y5I3 950 aa8.88□□□□□ -0.99
HTT-208ENST00000510626 KIAA0556O60303 1618 aa8.88□□□□□ -0.99
HTT-208ENST00000510626 CES2O00748 559 aa8.88□□□□□ -0.99
HTT-208ENST00000510626 ARHGEF16Q5VV41 709 aa8.88□□□□□ -0.99
HTT-208ENST00000510626 FRMD5Q7Z6J6 570 aa8.88□□□□□ -0.99
HTT-208ENST00000510626 SEC16BQ96JE7 1060 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms