RNA–Protein interactions for RNA: ENST00000509995.5

SNF8-207, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-207ENST00000509995 MTHFD1LQ6UB35 978 aa12.41□□□□□ -0.42
SNF8-207ENST00000509995 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.41□□□□□ -0.42
SNF8-207ENST00000509995 DGKHQ86XP1 1220 aa12.41□□□□□ -0.42
SNF8-207ENST00000509995 ECHDC2Q86YB7 292 aa12.41□□□□□ -0.42
SNF8-207ENST00000509995 RNF169Q8NCN4 708 aa12.41□□□□□ -0.42
SNF8-207ENST00000509995 HELQQ8TDG4 1101 aa12.41□□□□□ -0.42
SNF8-207ENST00000509995 BCL7CQ8WUZ0 217 aaPredicted RBP12.41□□□□□ -0.42
SNF8-207ENST00000509995 SMG7Q92540 1137 aaKnown RBP12.41□□□□□ -0.42
SNF8-207ENST00000509995 GATA6Q92908 595 aa12.41□□□□□ -0.42
SNF8-207ENST00000509995 TNPO1Q92973 898 aaKnown RBP12.41□□□□□ -0.42
SNF8-207ENST00000509995 IGSF21Q96ID5 467 aa12.41□□□□□ -0.42
SNF8-207ENST00000509995 RPP25Q9BUL9 199 aaKnown RBP12.41□□□□□ -0.42
SNF8-207ENST00000509995 LRRCC1Q9C099 1032 aa12.41□□□□□ -0.42
SNF8-207ENST00000509995 WASF3Q9UPY6 502 aa12.41□□□□□ -0.42
SNF8-207ENST00000509995 SPAG17Q6Q759 2223 aa12.41□□□□□ -0.42
SNF8-207ENST00000509995 UNC79Q9P2D8 2635 aa12.41□□□□□ -0.42
SNF8-207ENST00000509995 BAZ2BQ9UIF8 2168 aaKnown RBP12.4□□□□□ -0.42
SNF8-207ENST00000509995 F5P12259 2224 aa12.4□□□□□ -0.42
SNF8-207ENST00000509995 TRIM6-TRIM34B2RNG4 842 aa12.4□□□□□ -0.42
SNF8-207ENST00000509995 ZBTB5O15062 677 aa12.4□□□□□ -0.42
SNF8-207ENST00000509995 NCAM2O15394 837 aa12.4□□□□□ -0.42
SNF8-207ENST00000509995 SMARCA5O60264 1052 aaPredicted RBP12.4□□□□□ -0.42
SNF8-207ENST00000509995 ATP9AO75110 1047 aa12.4□□□□□ -0.42
SNF8-207ENST00000509995 PARP1P09874 1014 aaKnown RBP12.4□□□□□ -0.42
SNF8-207ENST00000509995 SIM2Q14190 667 aaPredicted RBP12.4□□□□□ -0.42
SNF8-207ENST00000509995 PSAPL1Q6NUJ1 521 aa12.4□□□□□ -0.42
SNF8-207ENST00000509995 FGF14Q92915 247 aa12.4□□□□□ -0.42
SNF8-207ENST00000509995 MTMR8Q96EF0 704 aa12.4□□□□□ -0.42
SNF8-207ENST00000509995 GPATCH3Q96I76 525 aa12.4□□□□□ -0.42
SNF8-207ENST00000509995 PCYT2Q99447 389 aa12.4□□□□□ -0.42
SNF8-207ENST00000509995 OSMRQ99650 979 aa12.4□□□□□ -0.42
SNF8-207ENST00000509995 ZKSCAN3Q9BRR0 538 aa12.4□□□□□ -0.42
SNF8-207ENST00000509995 LSM14BQ9BX40 385 aaKnown RBP12.4□□□□□ -0.42
SNF8-207ENST00000509995 VN1R3Q9BXE9 311 aa12.4□□□□□ -0.42
SNF8-207ENST00000509995 FAM217BQ9NTX9 383 aaPredicted RBP12.4□□□□□ -0.42
SNF8-207ENST00000509995 CARNS1A5YM72 827 aa12.39□□□□□ -0.43
SNF8-207ENST00000509995 RFPL2O75678 378 aa12.39□□□□□ -0.43
SNF8-207ENST00000509995 SPINK2P20155 84 aa12.39□□□□□ -0.43
SNF8-207ENST00000509995 PPP2R5DQ14738 602 aa12.39□□□□□ -0.43
SNF8-207ENST00000509995 ALX1Q15699 326 aa12.39□□□□□ -0.43
SNF8-207ENST00000509995 PCNX4Q63HM2 1172 aa12.39□□□□□ -0.43
SNF8-207ENST00000509995 ELMSAN1Q6PJG2 1045 aa12.39□□□□□ -0.43
SNF8-207ENST00000509995 NLRX1Q86UT6 975 aa12.39□□□□□ -0.43
SNF8-207ENST00000509995 ZNF707Q96C28 371 aaPredicted RBP12.39□□□□□ -0.43
SNF8-207ENST00000509995 KIF12Q96FN5 646 aa12.39□□□□□ -0.43
SNF8-207ENST00000509995 NELL2Q99435 816 aa12.39□□□□□ -0.43
SNF8-207ENST00000509995 KAT14Q9H8E8 782 aa12.39□□□□□ -0.43
SNF8-207ENST00000509995 PAPLNO95428 1278 aa12.38□□□□□ -0.43
SNF8-207ENST00000509995 PCP11498 1178 aaKnown RBP12.38□□□□□ -0.43
SNF8-207ENST00000509995 CRYBB1P53674 252 aaPredicted RBP12.38□□□□□ -0.43
SNF8-207ENST00000509995 PFKPQ01813 784 aa12.38□□□□□ -0.43
SNF8-207ENST00000509995 FOXC1Q12948 553 aa12.38□□□□□ -0.43
SNF8-207ENST00000509995 FZD5Q13467 585 aa12.38□□□□□ -0.43
SNF8-207ENST00000509995 SF3A2Q15428 464 aaKnown RBP12.38□□□□□ -0.43
SNF8-207ENST00000509995 KIZQ2M2Z5 673 aa12.38□□□□□ -0.43
SNF8-207ENST00000509995 STPG1Q5TH74 334 aa12.38□□□□□ -0.43
SNF8-207ENST00000509995 PARM1Q6UWI2 310 aa12.38□□□□□ -0.43
SNF8-207ENST00000509995 TPRG1Q6ZUI0 275 aa12.38□□□□□ -0.43
SNF8-207ENST00000509995 ZNF598Q86UK7 904 aaKnown RBP12.38□□□□□ -0.43
SNF8-207ENST00000509995 KIAA0319LQ8IZA0 1049 aa12.38□□□□□ -0.43
SNF8-207ENST00000509995 MIER1Q8N108 512 aa12.38□□□□□ -0.43
SNF8-207ENST00000509995 GPRASP2Q96D09 838 aa12.38□□□□□ -0.43
SNF8-207ENST00000509995 PPP1R16BQ96T49 567 aa12.38□□□□□ -0.43
SNF8-207ENST00000509995 AZI2Q9H6S1 392 aa12.38□□□□□ -0.43
SNF8-207ENST00000509995 RXFP3Q9NSD7 469 aa12.38□□□□□ -0.43
SNF8-207ENST00000509995 DPP7Q9UHL4 492 aa12.38□□□□□ -0.43
SNF8-207ENST00000509995 ZFP37Q9Y6Q3 630 aaPredicted RBP12.38□□□□□ -0.43
SNF8-207ENST00000509995 LILRB3O75022 631 aa12.37□□□□□ -0.43
SNF8-207ENST00000509995 FGAP02671 866 aa12.37□□□□□ -0.43
SNF8-207ENST00000509995 SSBP05455 408 aaKnown RBP eCLIP12.37□□□□□ -0.43
SNF8-207ENST00000509995 ZSCAN20P17040 1043 aaPredicted RBP12.37□□□□□ -0.43
SNF8-207ENST00000509995 KLRC1P26715 233 aa12.37□□□□□ -0.43
SNF8-207ENST00000509995 HAND2P61296 217 aa12.37□□□□□ -0.43
SNF8-207ENST00000509995 MAMSTRQ6ZN01 415 aa12.37□□□□□ -0.43
SNF8-207ENST00000509995 MFSD6Q6ZSS7 791 aa12.37□□□□□ -0.43
SNF8-207ENST00000509995 STAG2Q8N3U4 1231 aa12.37□□□□□ -0.43
SNF8-207ENST00000509995 C12orf50Q8NA57 414 aaPredicted RBP12.37□□□□□ -0.43
SNF8-207ENST00000509995 PHKBQ93100 1093 aa12.37□□□□□ -0.43
SNF8-207ENST00000509995 CDHR1Q96JP9 859 aa12.37□□□□□ -0.43
SNF8-207ENST00000509995 PIDD1Q9HB75 910 aa12.37□□□□□ -0.43
SNF8-207ENST00000509995 ZMYM6O95789 1325 aa12.37□□□□□ -0.43
SNF8-207ENST00000509995 NEDD4P46934 1319 aa12.37□□□□□ -0.43
SNF8-207ENST00000509995 GLUD1P00367 558 aa12.36□□□□□ -0.43
SNF8-207ENST00000509995 GALTP07902 379 aa12.36□□□□□ -0.43
SNF8-207ENST00000509995 ADCY1Q08828 1119 aa12.36□□□□□ -0.43
SNF8-207ENST00000509995 ZNF252P-AS1Q0IIN9 211 aa12.36□□□□□ -0.43
SNF8-207ENST00000509995 TRAF1Q13077 416 aa12.36□□□□□ -0.43
SNF8-207ENST00000509995 TBC1D10CQ8IV04 446 aa12.36□□□□□ -0.43
SNF8-207ENST00000509995 FAM160A2Q8N612 972 aaPredicted RBP12.36□□□□□ -0.43
SNF8-207ENST00000509995 ESR2Q92731 530 aa12.36□□□□□ -0.43
SNF8-207ENST00000509995 IER2Q9BTL4 223 aa12.36□□□□□ -0.43
SNF8-207ENST00000509995 CHRDQ9H2X0 955 aa12.36□□□□□ -0.43
SNF8-207ENST00000509995 MRPL17Q9NRX2 175 aaKnown RBP12.36□□□□□ -0.43
SNF8-207ENST00000509995 PKD2L1Q9P0L9 805 aa12.36□□□□□ -0.43
SNF8-207ENST00000509995 ANKFY1Q9P2R3 1169 aa12.36□□□□□ -0.43
SNF8-207ENST00000509995 STK39Q9UEW8 545 aa12.36□□□□□ -0.43
SNF8-207ENST00000509995 A0A0U1RQF3 1178 aa12.35□□□□□ -0.43
SNF8-207ENST00000509995 CYSRT1A8MQ03 144 aa12.35□□□□□ -0.43
SNF8-207ENST00000509995 HRO43593 1189 aa12.35□□□□□ -0.43
SNF8-207ENST00000509995 GPR32O75388 356 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms