RNA–Protein interactions for RNA: ENST00000509857.5

TRAPPC11-206, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-206ENST00000509857 ESPNLQ6ZVH7 1005 aa9.34□□□□□ -0.91
TRAPPC11-206ENST00000509857 BMP8AQ7Z5Y6 402 aa9.34□□□□□ -0.91
TRAPPC11-206ENST00000509857 CLRN3Q8NCR9 226 aa9.34□□□□□ -0.91
TRAPPC11-206ENST00000509857 ADAM7Q9H2U9 754 aa9.34□□□□□ -0.91
TRAPPC11-206ENST00000509857 DENND2AQ9ULE3 1009 aa9.34□□□□□ -0.91
TRAPPC11-206ENST00000509857 ZDHHC9Q9Y397 364 aa9.34□□□□□ -0.91
TRAPPC11-206ENST00000509857 SLC4A7Q9Y6M7 1214 aa9.34□□□□□ -0.91
TRAPPC11-206ENST00000509857 MAPKBP1O60336 1514 aa9.34□□□□□ -0.91
TRAPPC11-206ENST00000509857 ROCK1Q13464 1354 aa9.34□□□□□ -0.91
TRAPPC11-206ENST00000509857 ABCA8O94911 1581 aa9.33□□□□□ -0.92
TRAPPC11-206ENST00000509857 KDM1AO60341 852 aa9.33□□□□□ -0.92
TRAPPC11-206ENST00000509857 DGKDQ16760 1214 aa9.33□□□□□ -0.92
TRAPPC11-206ENST00000509857 LHFPL2Q6ZUX7 228 aa9.33□□□□□ -0.92
TRAPPC11-206ENST00000509857 LARP4Q71RC2 724 aaKnown RBP eCLIP9.33□□□□□ -0.92
TRAPPC11-206ENST00000509857 GPR155Q7Z3F1 870 aa9.33□□□□□ -0.92
TRAPPC11-206ENST00000509857 CXorf67Q86X51 503 aaPredicted RBP9.33□□□□□ -0.92
TRAPPC11-206ENST00000509857 C20orf173Q96LM9 149 aa9.33□□□□□ -0.92
TRAPPC11-206ENST00000509857 WNT8AQ9H1J5 351 aa9.33□□□□□ -0.92
TRAPPC11-206ENST00000509857 MCM8Q9UJA3 840 aa9.33□□□□□ -0.92
TRAPPC11-206ENST00000509857 CDC42EP3Q9UKI2 254 aa9.33□□□□□ -0.92
TRAPPC11-206ENST00000509857 INVSQ9Y283 1065 aa9.33□□□□□ -0.92
TRAPPC11-206ENST00000509857 GCC2Q8IWJ2 1684 aa9.32□□□□□ -0.92
TRAPPC11-206ENST00000509857 ITSN2Q9NZM3 1697 aa9.32□□□□□ -0.92
TRAPPC11-206ENST00000509857 NAIPQ13075 1403 aa9.32□□□□□ -0.92
TRAPPC11-206ENST00000509857 CDK13Q14004 1512 aaKnown RBP9.32□□□□□ -0.92
TRAPPC11-206ENST00000509857 A0A0A6YYJ9 748 aa9.32□□□□□ -0.92
TRAPPC11-206ENST00000509857 LCHNA4D1U4 455 aa9.32□□□□□ -0.92
TRAPPC11-206ENST00000509857 AMPD3Q01432 767 aa9.32□□□□□ -0.92
TRAPPC11-206ENST00000509857 SURF1Q15526 300 aa9.32□□□□□ -0.92
TRAPPC11-206ENST00000509857 ZBTB41Q5SVQ8 909 aa9.32□□□□□ -0.92
TRAPPC11-206ENST00000509857 RNF219Q5W0B1 726 aaPredicted RBP9.32□□□□□ -0.92
TRAPPC11-206ENST00000509857 UNQ6494/PRO21346Q6UXR6 183 aa9.32□□□□□ -0.92
TRAPPC11-206ENST00000509857 SPATS2Q86XZ4 545 aaKnown RBP9.32□□□□□ -0.92
TRAPPC11-206ENST00000509857 WDR66Q8TBY9 1149 aa9.32□□□□□ -0.92
TRAPPC11-206ENST00000509857 ATP8A1Q9Y2Q0 1164 aa9.32□□□□□ -0.92
TRAPPC11-206ENST00000509857 PTPN22Q9Y2R2 807 aa9.32□□□□□ -0.92
TRAPPC11-206ENST00000509857 VWA7Q9Y334 891 aa9.32□□□□□ -0.92
TRAPPC11-206ENST00000509857 SHROOM2Q13796 1616 aa9.31□□□□□ -0.92
TRAPPC11-206ENST00000509857 MAFGO15525 162 aa9.31□□□□□ -0.92
TRAPPC11-206ENST00000509857 EPHB4P54760 987 aa9.31□□□□□ -0.92
TRAPPC11-206ENST00000509857 ZMAT1Q5H9K5 638 aa9.31□□□□□ -0.92
TRAPPC11-206ENST00000509857 HDGFL2Q7Z4V5 671 aaPredicted RBP9.31□□□□□ -0.92
TRAPPC11-206ENST00000509857 DDX42Q86XP3 938 aaKnown RBP eCLIP9.31□□□□□ -0.92
TRAPPC11-206ENST00000509857 MTG2Q9H4K7 406 aa9.31□□□□□ -0.92
TRAPPC11-206ENST00000509857 SAE1Q9UBE0 346 aaPredicted RBP9.31□□□□□ -0.92
TRAPPC11-206ENST00000509857 NOC2LQ9Y3T9 749 aaKnown RBP9.31□□□□□ -0.92
TRAPPC11-206ENST00000509857 PRICKLE3O43900 615 aaPredicted RBP9.3□□□□□ -0.92
TRAPPC11-206ENST00000509857 OPHN1O60890 802 aa9.3□□□□□ -0.92
TRAPPC11-206ENST00000509857 RAB11FIP3O75154 756 aa9.3□□□□□ -0.92
TRAPPC11-206ENST00000509857 APOL3O95236 402 aa9.3□□□□□ -0.92
TRAPPC11-206ENST00000509857 PFKMP08237 780 aa9.3□□□□□ -0.92
TRAPPC11-206ENST00000509857 MANFP55145 182 aaKnown RBP9.3□□□□□ -0.92
TRAPPC11-206ENST00000509857 ANTXR2P58335 489 aa9.3□□□□□ -0.92
TRAPPC11-206ENST00000509857 TMPRSS15P98073 1019 aa9.3□□□□□ -0.92
TRAPPC11-206ENST00000509857 FAPQ12884 760 aa9.3□□□□□ -0.92
TRAPPC11-206ENST00000509857 NFYCQ13952 458 aa9.3□□□□□ -0.92
TRAPPC11-206ENST00000509857 AGBL4Q5VU57 503 aa9.3□□□□□ -0.92
TRAPPC11-206ENST00000509857 ATL2Q8NHH9 583 aa9.3□□□□□ -0.92
TRAPPC11-206ENST00000509857 TOPORSQ9NS56 1045 aaPredicted RBP9.3□□□□□ -0.92
TRAPPC11-206ENST00000509857 PPP2R3BQ9Y5P8 575 aa9.3□□□□□ -0.92
TRAPPC11-206ENST00000509857 LAMTOR5O43504 91 aa9.29□□□□□ -0.92
TRAPPC11-206ENST00000509857 CNOT4O95628 575 aaKnown RBP9.29□□□□□ -0.92
TRAPPC11-206ENST00000509857 PLATP00750 562 aa9.29□□□□□ -0.92
TRAPPC11-206ENST00000509857 STAT5BP51692 787 aa9.29□□□□□ -0.92
TRAPPC11-206ENST00000509857 PCOLCEQ15113 449 aa9.29□□□□□ -0.92
TRAPPC11-206ENST00000509857 UBXN11Q5T124 520 aa9.29□□□□□ -0.92
TRAPPC11-206ENST00000509857 RTKN2Q8IZC4 609 aa9.29□□□□□ -0.92
TRAPPC11-206ENST00000509857 NKD2Q969F2 451 aaPredicted RBP9.29□□□□□ -0.92
TRAPPC11-206ENST00000509857 FERMT2Q96AC1 680 aa9.29□□□□□ -0.92
TRAPPC11-206ENST00000509857 KRTAP9-9Q9BYP9 154 aa9.29□□□□□ -0.92
TRAPPC11-206ENST00000509857 KRTAP9-4Q9BYQ2 154 aa9.29□□□□□ -0.92
TRAPPC11-206ENST00000509857 BRINP2Q9C0B6 783 aa9.29□□□□□ -0.92
TRAPPC11-206ENST00000509857 KIAA1683Q9H0B3 1180 aa9.29□□□□□ -0.92
TRAPPC11-206ENST00000509857 POLR3BQ9NW08 1133 aaPredicted RBP9.29□□□□□ -0.92
TRAPPC11-206ENST00000509857 COL4A3BPQ9Y5P4 624 aa9.29□□□□□ -0.92
TRAPPC11-206ENST00000509857 DNMT1P26358 1616 aaKnown RBP9.29□□□□□ -0.92
TRAPPC11-206ENST00000509857 PTPRKQ15262 1439 aa9.29□□□□□ -0.92
TRAPPC11-206ENST00000509857 ST20-MTHFSA0A0A6YYL1 179 aa9.28□□□□□ -0.92
TRAPPC11-206ENST00000509857 BTBD11A6QL63 1104 aa9.28□□□□□ -0.92
TRAPPC11-206ENST00000509857 B4GALT4O60513 344 aa9.28□□□□□ -0.92
TRAPPC11-206ENST00000509857 MRE11P49959 708 aa9.28□□□□□ -0.92
TRAPPC11-206ENST00000509857 SESN2P58004 480 aaPredicted RBP9.28□□□□□ -0.92
TRAPPC11-206ENST00000509857 PPP2CBP62714 309 aa9.28□□□□□ -0.92
TRAPPC11-206ENST00000509857 PPP2CAP67775 309 aa9.28□□□□□ -0.92
TRAPPC11-206ENST00000509857 NFIXQ14938 502 aa9.28□□□□□ -0.92
TRAPPC11-206ENST00000509857 PDCD1Q15116 288 aa9.28□□□□□ -0.92
TRAPPC11-206ENST00000509857 TBC1D10BQ4KMP7 808 aaPredicted RBP9.28□□□□□ -0.92
TRAPPC11-206ENST00000509857 IQSEC1Q6DN90 963 aa9.28□□□□□ -0.92
TRAPPC11-206ENST00000509857 FERMT3Q86UX7 667 aa9.28□□□□□ -0.92
TRAPPC11-206ENST00000509857 OR10A2Q9H208 303 aa9.28□□□□□ -0.92
TRAPPC11-206ENST00000509857 SEC61A2Q9H9S3 476 aa9.28□□□□□ -0.92
TRAPPC11-206ENST00000509857 TMPRSS11EQ9UL52 423 aa9.28□□□□□ -0.92
TRAPPC11-206ENST00000509857 MYPNQ86TC9 1320 aa9.28□□□□□ -0.92
TRAPPC11-206ENST00000509857 PRSS38A1L453 326 aa9.27□□□□□ -0.93
TRAPPC11-206ENST00000509857 K7ESF4 209 aa9.27□□□□□ -0.93
TRAPPC11-206ENST00000509857 MEOX1P50221 254 aa9.27□□□□□ -0.93
TRAPPC11-206ENST00000509857 RRADP55042 308 aa9.27□□□□□ -0.93
TRAPPC11-206ENST00000509857 KLHDC10Q6PID8 442 aa9.27□□□□□ -0.93
TRAPPC11-206ENST00000509857 ARHGEF18Q6ZSZ5 1173 aa9.27□□□□□ -0.93
TRAPPC11-206ENST00000509857 NECAB2Q7Z6G3 386 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms