RNA–Protein interactions for RNA: ENST00000509388.5

RNF4-213, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-213ENST00000509388 PARVGQ9HBI0 331 aa16.41■□□□□ 0.22
RNF4-213ENST00000509388 A0A087WZ62 844 aa16.4■□□□□ 0.22
RNF4-213ENST00000509388 LRRIQ4A6NIV6 560 aa16.4■□□□□ 0.22
RNF4-213ENST00000509388 GTPBP6O43824 516 aaPredicted RBP16.4■□□□□ 0.22
RNF4-213ENST00000509388 PLS3P13797 630 aa16.4■□□□□ 0.22
RNF4-213ENST00000509388 SYN1P17600 705 aa16.4■□□□□ 0.22
RNF4-213ENST00000509388 PHKA2P46019 1235 aa16.4■□□□□ 0.22
RNF4-213ENST00000509388 RGS19P49795 217 aa16.4■□□□□ 0.22
RNF4-213ENST00000509388 CRYBB1P53674 252 aaPredicted RBP16.4■□□□□ 0.22
RNF4-213ENST00000509388 PEX3P56589 373 aa16.4■□□□□ 0.22
RNF4-213ENST00000509388 ODR4Q5SWX8 454 aa16.4■□□□□ 0.22
RNF4-213ENST00000509388 ZBTB8OSQ8IWT0 167 aa16.4■□□□□ 0.22
RNF4-213ENST00000509388 OSMRQ99650 979 aa16.4■□□□□ 0.22
RNF4-213ENST00000509388 LBHD1Q9BQE6 289 aaPredicted RBP16.4■□□□□ 0.22
RNF4-213ENST00000509388 FDXACB1Q9BRP7 624 aaPredicted RBP16.4■□□□□ 0.22
RNF4-213ENST00000509388 PANK4Q9NVE7 773 aa16.4■□□□□ 0.22
RNF4-213ENST00000509388 ZMYND8Q9ULU4 1186 aaPredicted RBP16.4■□□□□ 0.22
RNF4-213ENST00000509388 UMODL1Q5DID0 1318 aa16.4■□□□□ 0.22
RNF4-213ENST00000509388 GPR32O75388 356 aa16.39■□□□□ 0.21
RNF4-213ENST00000509388 CHRNA1P02708 482 aa16.39■□□□□ 0.21
RNF4-213ENST00000509388 GAP43P17677 238 aa16.39■□□□□ 0.21
RNF4-213ENST00000509388 NAMPTP43490 491 aa16.39■□□□□ 0.21
RNF4-213ENST00000509388 CUL4BQ13620 913 aa16.39■□□□□ 0.21
RNF4-213ENST00000509388 POSTNQ15063 836 aa16.39■□□□□ 0.21
RNF4-213ENST00000509388 HERC4Q5GLZ8 1057 aaPredicted RBP16.39■□□□□ 0.21
RNF4-213ENST00000509388 FAM26DQ5JW98 314 aa16.39■□□□□ 0.21
RNF4-213ENST00000509388 C2orf40Q9H1Z8 148 aa16.39■□□□□ 0.21
RNF4-213ENST00000509388 KMT5AQ9NQR1 393 aa16.39■□□□□ 0.21
RNF4-213ENST00000509388 BRCA2P51587 3418 aa16.39■□□□□ 0.21
RNF4-213ENST00000509388 KAT6AQ92794 2004 aa16.38■□□□□ 0.21
RNF4-213ENST00000509388 H0YCG3 227 aa16.38■□□□□ 0.21
RNF4-213ENST00000509388 INO80B-WBP1J3KQ70 363 aa16.38■□□□□ 0.21
RNF4-213ENST00000509388 TRAK2O60296 914 aa16.38■□□□□ 0.21
RNF4-213ENST00000509388 RPS6KA5O75582 802 aa16.38■□□□□ 0.21
RNF4-213ENST00000509388 SMC2O95347 1197 aa16.38■□□□□ 0.21
RNF4-213ENST00000509388 EIF4BP23588 611 aaKnown RBP16.38■□□□□ 0.21
RNF4-213ENST00000509388 CASP1P29466 404 aa16.38■□□□□ 0.21
RNF4-213ENST00000509388 RFC2P35250 354 aa16.38■□□□□ 0.21
RNF4-213ENST00000509388 NPTX2P47972 431 aa16.38■□□□□ 0.21
RNF4-213ENST00000509388 POU5F1BQ06416 359 aa16.38■□□□□ 0.21
RNF4-213ENST00000509388 MGAT3Q09327 533 aa16.38■□□□□ 0.21
RNF4-213ENST00000509388 MAPK7Q13164 816 aa16.38■□□□□ 0.21
RNF4-213ENST00000509388 CAPSQ13938 189 aa16.38■□□□□ 0.21
RNF4-213ENST00000509388 MFSD5Q6N075 450 aa16.38■□□□□ 0.21
RNF4-213ENST00000509388 UNC13DQ70J99 1090 aa16.38■□□□□ 0.21
RNF4-213ENST00000509388 SRGAP1Q7Z6B7 1085 aa16.38■□□□□ 0.21
RNF4-213ENST00000509388 FAM178BQ8IXR5 827 aa16.38■□□□□ 0.21
RNF4-213ENST00000509388 ELOA2Q8IYF1 753 aaPredicted RBP16.38■□□□□ 0.21
RNF4-213ENST00000509388 DAW1Q8N136 415 aa16.38■□□□□ 0.21
RNF4-213ENST00000509388 USP38Q8NB14 1042 aa16.38■□□□□ 0.21
RNF4-213ENST00000509388 SLC17A8Q8NDX2 589 aa16.38■□□□□ 0.21
RNF4-213ENST00000509388 DNAJC19Q96DA6 116 aa16.38■□□□□ 0.21
RNF4-213ENST00000509388 SCLYQ96I15 445 aa16.38■□□□□ 0.21
RNF4-213ENST00000509388 ADAMTS10Q9H324 1103 aa16.38■□□□□ 0.21
RNF4-213ENST00000509388 CDHR5Q9HBB8 845 aa16.38■□□□□ 0.21
RNF4-213ENST00000509388 SEL1LQ9UBV2 794 aa16.38■□□□□ 0.21
RNF4-213ENST00000509388 PVALEFA0A1B0GWK0 134 aa16.37■□□□□ 0.21
RNF4-213ENST00000509388 GPR182O15218 404 aa16.37■□□□□ 0.21
RNF4-213ENST00000509388 GHRP10912 638 aa16.37■□□□□ 0.21
RNF4-213ENST00000509388 DARSP14868 501 aaKnown RBP16.37■□□□□ 0.21
RNF4-213ENST00000509388 SFPQP23246 707 aaKnown RBP eCLIP16.37■□□□□ 0.21
RNF4-213ENST00000509388 ZNF131P52739 623 aa16.37■□□□□ 0.21
RNF4-213ENST00000509388 EFNA5P52803 228 aa16.37■□□□□ 0.21
RNF4-213ENST00000509388 PTENP60484 403 aa16.37■□□□□ 0.21
RNF4-213ENST00000509388 MLLT1Q03111 559 aaPredicted RBP16.37■□□□□ 0.21
RNF4-213ENST00000509388 NCBP1Q09161 790 aaKnown RBP16.37■□□□□ 0.21
RNF4-213ENST00000509388 NFX1Q12986 1120 aaKnown RBP16.37■□□□□ 0.21
RNF4-213ENST00000509388 FBXO47Q5MNV8 452 aa16.37■□□□□ 0.21
RNF4-213ENST00000509388 CNNM4Q6P4Q7 775 aa16.37■□□□□ 0.21
RNF4-213ENST00000509388 DEFB128Q7Z7B8 93 aa16.37■□□□□ 0.21
RNF4-213ENST00000509388 RPUSD2Q8IZ73 545 aaKnown RBP16.37■□□□□ 0.21
RNF4-213ENST00000509388 SPIRE2Q8WWL2 714 aa16.37■□□□□ 0.21
RNF4-213ENST00000509388 BSNDQ8WZ55 320 aa16.37■□□□□ 0.21
RNF4-213ENST00000509388 BADQ92934 168 aa16.37■□□□□ 0.21
RNF4-213ENST00000509388 WNT8AQ9H1J5 351 aa16.37■□□□□ 0.21
RNF4-213ENST00000509388 MRPL44Q9H9J2 332 aaKnown RBP16.37■□□□□ 0.21
RNF4-213ENST00000509388 SQORQ9Y6N5 450 aa16.37■□□□□ 0.21
RNF4-213ENST00000509388 PHLPP2Q6ZVD8 1323 aa16.37■□□□□ 0.21
RNF4-213ENST00000509388 K7ENM7 598 aa16.36■□□□□ 0.21
RNF4-213ENST00000509388 K7ERI5 159 aa16.36■□□□□ 0.21
RNF4-213ENST00000509388 SLC16A4O15374 487 aa16.36■□□□□ 0.21
RNF4-213ENST00000509388 RPN1P04843 607 aaKnown RBP16.36■□□□□ 0.21
RNF4-213ENST00000509388 PRR29P0C7W0 189 aa16.36■□□□□ 0.21
RNF4-213ENST00000509388 ITGB8P26012 769 aa16.36■□□□□ 0.21
RNF4-213ENST00000509388 FPGSQ05932 587 aa16.36■□□□□ 0.21
RNF4-213ENST00000509388 PAK2Q13177 524 aa16.36■□□□□ 0.21
RNF4-213ENST00000509388 PPIGQ13427 754 aaKnown RBP eCLIP16.36■□□□□ 0.214e-10■■□□□ 12.4
RNF4-213ENST00000509388 PNOCQ13519 176 aa16.36■□□□□ 0.21
RNF4-213ENST00000509388 CAMK4Q16566 473 aa16.36■□□□□ 0.21
RNF4-213ENST00000509388 TRAF7Q6Q0C0 670 aa16.36■□□□□ 0.21
RNF4-213ENST00000509388 TSHZ1Q6ZSZ6 1077 aa16.36■□□□□ 0.21
RNF4-213ENST00000509388 STXBP4Q6ZWJ1 553 aa16.36■□□□□ 0.21
RNF4-213ENST00000509388 CATSPER4Q7RTX7 472 aa16.36■□□□□ 0.21
RNF4-213ENST00000509388 SFR1Q86XK3 245 aa16.36■□□□□ 0.21
RNF4-213ENST00000509388 GPT2Q8TD30 523 aa16.36■□□□□ 0.21
RNF4-213ENST00000509388 SEPT8Q92599 483 aa16.36■□□□□ 0.21
RNF4-213ENST00000509388 SMARCE1Q969G3 411 aa16.36■□□□□ 0.21
RNF4-213ENST00000509388 NTPCRQ9BSD7 190 aaKnown RBP16.36■□□□□ 0.21
RNF4-213ENST00000509388 KIFC3Q9BVG8 833 aa16.36■□□□□ 0.21
RNF4-213ENST00000509388 NFKBIZQ9BYH8 718 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms