RNA–Protein interactions for RNA: ENST00000509009.5

PDPN-208, Transcript of podoplanin, humanhuman

TSL 4 BASIC

Gene PDPN, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-208ENST00000509009 EYA4O95677 639 aa14.02□□□□□ -0.17
PDPN-208ENST00000509009 PLCB3Q01970 1234 aa14.02□□□□□ -0.17
PDPN-208ENST00000509009 SMAD4Q13485 552 aaKnown RBP14.02□□□□□ -0.17
PDPN-208ENST00000509009 CLLU1OSQ5K130 101 aa14.02□□□□□ -0.17
PDPN-208ENST00000509009 PLA2G4FQ68DD2 849 aa14.02□□□□□ -0.17
PDPN-208ENST00000509009 PDE12Q6L8Q7 609 aaKnown RBP14.02□□□□□ -0.17
PDPN-208ENST00000509009 KCNT2Q6UVM3 1135 aa14.02□□□□□ -0.17
PDPN-208ENST00000509009 ZNF410Q86VK4 478 aa14.02□□□□□ -0.17
PDPN-208ENST00000509009 RHPN2Q8IUC4 686 aa14.02□□□□□ -0.17
PDPN-208ENST00000509009 KSR1Q8IVT5 923 aa14.02□□□□□ -0.17
PDPN-208ENST00000509009 RNF169Q8NCN4 708 aa14.02□□□□□ -0.17
PDPN-208ENST00000509009 TNFRSF25Q93038 417 aa14.02□□□□□ -0.17
PDPN-208ENST00000509009 NAP1L4Q99733 375 aaKnown RBP14.02□□□□□ -0.17
PDPN-208ENST00000509009 CYP26B1Q9NR63 512 aa14.02□□□□□ -0.17
PDPN-208ENST00000509009 TLR9Q9NR96 1032 aa14.02□□□□□ -0.17
PDPN-208ENST00000509009 DACT1Q9NYF0 836 aa14.02□□□□□ -0.17
PDPN-208ENST00000509009 WRAP73Q9P2S5 460 aaPredicted RBP14.02□□□□□ -0.17
PDPN-208ENST00000509009 LZTS1Q9Y250 596 aa14.02□□□□□ -0.17
PDPN-208ENST00000509009 C5orf42Q9H799 3197 aa14.02□□□□□ -0.17
PDPN-208ENST00000509009 FNDC1Q4ZHG4 1894 aaPredicted RBP14.01□□□□□ -0.17
PDPN-208ENST00000509009 FAM86C2PA6NEL3 165 aa14.01□□□□□ -0.17
PDPN-208ENST00000509009 MARCH6O60337 910 aa14.01□□□□□ -0.17
PDPN-208ENST00000509009 DKC1O60832 514 aaKnown RBP eCLIP14.01□□□□□ -0.17
PDPN-208ENST00000509009 GLP2RO95838 553 aa14.01□□□□□ -0.17
PDPN-208ENST00000509009 ALADP13716 330 aa14.01□□□□□ -0.17
PDPN-208ENST00000509009 ATF7P17544 494 aaPredicted RBP14.01□□□□□ -0.17
PDPN-208ENST00000509009 NDUFV1P49821 464 aa14.01□□□□□ -0.17
PDPN-208ENST00000509009 NEK4P51957 841 aa14.01□□□□□ -0.17
PDPN-208ENST00000509009 COASYQ13057 564 aa14.01□□□□□ -0.17
PDPN-208ENST00000509009 NR5A1Q13285 461 aa14.01□□□□□ -0.17
PDPN-208ENST00000509009 C4orf19Q8IY42 314 aa14.01□□□□□ -0.17
PDPN-208ENST00000509009 ABI1Q8IZP0 508 aa14.01□□□□□ -0.17
PDPN-208ENST00000509009 MRPS27Q92552 414 aaKnown RBP14.01□□□□□ -0.17
PDPN-208ENST00000509009 GTF3C6Q969F1 213 aa14.01□□□□□ -0.17
PDPN-208ENST00000509009 ZNF558Q96NG5 402 aa14.01□□□□□ -0.17
PDPN-208ENST00000509009 JPH2Q9BR39 696 aaPredicted RBP14.01□□□□□ -0.17
PDPN-208ENST00000509009 TRAIPQ9BWF2 469 aa14.01□□□□□ -0.17
PDPN-208ENST00000509009 INO80BQ9C086 356 aaPredicted RBP14.01□□□□□ -0.17
PDPN-208ENST00000509009 RGL1Q9NZL6 768 aa14.01□□□□□ -0.17
PDPN-208ENST00000509009 PUF60Q9UHX1 559 aaKnown RBP14.01□□□□□ -0.17
PDPN-208ENST00000509009 ATG2AQ2TAZ0 1938 aa14□□□□□ -0.17
PDPN-208ENST00000509009 ZBTB39O15060 712 aa14□□□□□ -0.17
PDPN-208ENST00000509009 BAG4O95429 457 aaKnown RBP14□□□□□ -0.17
PDPN-208ENST00000509009 SEC24BO95487 1268 aa14□□□□□ -0.17
PDPN-208ENST00000509009 KRT2P35908 639 aa14□□□□□ -0.17
PDPN-208ENST00000509009 PBX3P40426 434 aa14□□□□□ -0.17
PDPN-208ENST00000509009 PHKA2P46019 1235 aa14□□□□□ -0.17
PDPN-208ENST00000509009 SPIRE1Q08AE8 756 aa14□□□□□ -0.17
PDPN-208ENST00000509009 DUSP6Q16828 381 aa14□□□□□ -0.17
PDPN-208ENST00000509009 POTEDQ86YR6 584 aa14□□□□□ -0.17
PDPN-208ENST00000509009 EXOC8Q8IYI6 725 aa14□□□□□ -0.17
PDPN-208ENST00000509009 NSUN7Q8NE18 718 aaKnown RBP14□□□□□ -0.17
PDPN-208ENST00000509009 HELQQ8TDG4 1101 aa14□□□□□ -0.17
PDPN-208ENST00000509009 PRPF31Q8WWY3 499 aaKnown RBP14□□□□□ -0.17
PDPN-208ENST00000509009 DYDC2Q96IM9 177 aa14□□□□□ -0.17
PDPN-208ENST00000509009 CEP170P1Q96L14 293 aa14□□□□□ -0.17
PDPN-208ENST00000509009 DHX33Q9H6R0 707 aaKnown RBP14□□□□□ -0.17
PDPN-208ENST00000509009 IFT122Q9HBG6 1241 aa14□□□□□ -0.17
PDPN-208ENST00000509009 SPG21Q9NZD8 308 aa14□□□□□ -0.17
PDPN-208ENST00000509009 PPME1Q9Y570 386 aa14□□□□□ -0.17
PDPN-208ENST00000509009 TRIOO75962 3097 aa14□□□□□ -0.17
PDPN-208ENST00000509009 KIAA1671Q9BY89 1806 aa13.99□□□□□ -0.17
PDPN-208ENST00000509009 BTBD18B2RXH4 712 aa13.99□□□□□ -0.17
PDPN-208ENST00000509009 DCXO43602 365 aa13.99□□□□□ -0.17
PDPN-208ENST00000509009 ZNF623O75123 536 aa13.99□□□□□ -0.17
PDPN-208ENST00000509009 SLITRK3O94933 977 aa13.99□□□□□ -0.17
PDPN-208ENST00000509009 SFPQP23246 707 aaKnown RBP eCLIP13.99□□□□□ -0.17
PDPN-208ENST00000509009 RBM10P98175 930 aaKnown RBP13.99□□□□□ -0.17
PDPN-208ENST00000509009 KRT17Q04695 432 aa13.99□□□□□ -0.17
PDPN-208ENST00000509009 CTTNQ14247 550 aaKnown RBP13.99□□□□□ -0.17
PDPN-208ENST00000509009 OTUD6AQ7L8S5 288 aa13.99□□□□□ -0.17
PDPN-208ENST00000509009 CATSPER4Q7RTX7 472 aa13.99□□□□□ -0.17
PDPN-208ENST00000509009 SLFN12Q8IYM2 578 aa13.99□□□□□ -0.17
PDPN-208ENST00000509009 LRRC43Q8N309 656 aa13.99□□□□□ -0.17
PDPN-208ENST00000509009 SMRP1Q8NCR6 262 aa13.99□□□□□ -0.17
PDPN-208ENST00000509009 VN1R2Q8NFZ6 395 aa13.99□□□□□ -0.17
PDPN-208ENST00000509009 SLC7A3Q8WY07 619 aa13.99□□□□□ -0.17
PDPN-208ENST00000509009 TMEM143Q96AN5 459 aa13.99□□□□□ -0.17
PDPN-208ENST00000509009 NLRP4Q96MN2 994 aa13.99□□□□□ -0.17
PDPN-208ENST00000509009 CDCA3Q99618 268 aaPredicted RBP13.99□□□□□ -0.17
PDPN-208ENST00000509009 ZSWIM4Q9H7M6 989 aa13.99□□□□□ -0.17
PDPN-208ENST00000509009 NGRNQ9NPE2 291 aaKnown RBP13.99□□□□□ -0.17
PDPN-208ENST00000509009 BARX2Q9UMQ3 279 aaPredicted RBP13.99□□□□□ -0.17
PDPN-208ENST00000509009 COL4A3BPQ9Y5P4 624 aa13.99□□□□□ -0.17
PDPN-208ENST00000509009 JAK2O60674 1132 aa13.98□□□□□ -0.17
PDPN-208ENST00000509009 EIF5BO60841 1220 aaKnown RBP13.98□□□□□ -0.17
PDPN-208ENST00000509009 SRGAP2CP0DJJ0 459 aa13.98□□□□□ -0.17
PDPN-208ENST00000509009 SKIP12755 728 aa13.98□□□□□ -0.17
PDPN-208ENST00000509009 YWHABP31946 246 aaKnown RBP13.98□□□□□ -0.17
PDPN-208ENST00000509009 PPM1AP35813 382 aa13.98□□□□□ -0.17
PDPN-208ENST00000509009 RFC5P40937 340 aa13.98□□□□□ -0.17
PDPN-208ENST00000509009 LAMTOR4Q0VGL1 99 aa13.98□□□□□ -0.17
PDPN-208ENST00000509009 KCNC3Q14003 757 aa13.98□□□□□ -0.17
PDPN-208ENST00000509009 XKR9Q5GH70 373 aa13.98□□□□□ -0.17
PDPN-208ENST00000509009 PLPP4Q5VZY2 271 aa13.98□□□□□ -0.17
PDPN-208ENST00000509009 TWF2Q6IBS0 349 aaKnown RBP13.98□□□□□ -0.17
PDPN-208ENST00000509009 NCAPH2Q6IBW4 605 aa13.98□□□□□ -0.17
PDPN-208ENST00000509009 TMEM184AQ6ZMB5 413 aa13.98□□□□□ -0.17
PDPN-208ENST00000509009 TPH2Q8IWU9 490 aa13.98□□□□□ -0.17
PDPN-208ENST00000509009 SLC39A11Q8N1S5 342 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms