RNA–Protein interactions for RNA: ENST00000508474.5

UBE2D3-224, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 4,819 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-224ENST00000508474 DEFA1P59665 94 aa7.79□□□□□ -1.16
UBE2D3-224ENST00000508474 DEFA3P59666 94 aa7.79□□□□□ -1.16
UBE2D3-224ENST00000508474 DDR1Q08345 913 aa7.79□□□□□ -1.16
UBE2D3-224ENST00000508474 MORF4L2Q15014 288 aa7.79□□□□□ -1.16
UBE2D3-224ENST00000508474 TRIP10Q15642 601 aa7.79□□□□□ -1.16
UBE2D3-224ENST00000508474 TMEM259Q4ZIN3 620 aa7.79□□□□□ -1.16
UBE2D3-224ENST00000508474 FAM102BQ5T8I3 360 aa7.79□□□□□ -1.16
UBE2D3-224ENST00000508474 C16orf89Q6UX73 402 aa7.79□□□□□ -1.16
UBE2D3-224ENST00000508474 BTNL9Q6UXG8 535 aa7.79□□□□□ -1.16
UBE2D3-224ENST00000508474 TBCKQ8TEA7 893 aa7.79□□□□□ -1.16
UBE2D3-224ENST00000508474 CCDC127Q96BQ5 260 aa7.79□□□□□ -1.16
UBE2D3-224ENST00000508474 PAWRQ96IZ0 340 aaKnown RBP7.79□□□□□ -1.16
UBE2D3-224ENST00000508474 TRAPPC9Q96Q05 1148 aa7.79□□□□□ -1.16
UBE2D3-224ENST00000508474 SH3GL2Q99962 352 aa7.79□□□□□ -1.16
UBE2D3-224ENST00000508474 SIKE1Q9BRV8 207 aa7.79□□□□□ -1.16
UBE2D3-224ENST00000508474 OSBPL8Q9BZF1 889 aa7.79□□□□□ -1.16
UBE2D3-224ENST00000508474 SMYD2Q9NRG4 433 aa7.79□□□□□ -1.16
UBE2D3-224ENST00000508474 BLOC1S6Q9UL45 172 aa7.79□□□□□ -1.16
UBE2D3-224ENST00000508474 RSPH10B2B2RC85 870 aa7.79□□□□□ -1.16
UBE2D3-224ENST00000508474 SASH1O94885 1247 aa7.79□□□□□ -1.16
UBE2D3-224ENST00000508474 GCP02774 474 aa7.79□□□□□ -1.16
UBE2D3-224ENST00000508474 GYPCP04921 128 aa7.79□□□□□ -1.16
UBE2D3-224ENST00000508474 RSPH10BP0C881 870 aa7.79□□□□□ -1.16
UBE2D3-224ENST00000508474 MYBL1P10243 752 aa7.79□□□□□ -1.16
UBE2D3-224ENST00000508474 SAT1P21673 171 aa7.79□□□□□ -1.16
UBE2D3-224ENST00000508474 ROR2Q01974 943 aaKnown RBP7.79□□□□□ -1.16
UBE2D3-224ENST00000508474 FMR1Q06787 632 aaKnown RBP eCLIP7.79□□□□□ -1.161e-7■□□□□ 9.5
UBE2D3-224ENST00000508474 INAQ16352 499 aa7.79□□□□□ -1.16
UBE2D3-224ENST00000508474 TRIM16LQ309B1 348 aa7.79□□□□□ -1.16
UBE2D3-224ENST00000508474 TAF1BQ53T94 588 aaPredicted RBP7.79□□□□□ -1.16
UBE2D3-224ENST00000508474 ARHGAP27Q6ZUM4 889 aa7.79□□□□□ -1.16
UBE2D3-224ENST00000508474 L3MBTL1Q9Y468 752 aa7.79□□□□□ -1.16
UBE2D3-224ENST00000508474 LIN7AO14910 233 aaPredicted RBP7.78□□□□□ -1.16
UBE2D3-224ENST00000508474 MED7O43513 233 aa7.78□□□□□ -1.16
UBE2D3-224ENST00000508474 ENO1P06733 434 aaKnown RBP7.78□□□□□ -1.16
UBE2D3-224ENST00000508474 DLATP10515 647 aaKnown RBP7.78□□□□□ -1.16
UBE2D3-224ENST00000508474 PECAM1P16284 738 aaPredicted RBP7.78□□□□□ -1.16
UBE2D3-224ENST00000508474 RFC4P35249 363 aa7.78□□□□□ -1.16
UBE2D3-224ENST00000508474 KCNH2Q12809 1159 aa7.78□□□□□ -1.16
UBE2D3-224ENST00000508474 KRR1Q13601 381 aaKnown RBP7.78□□□□□ -1.16
UBE2D3-224ENST00000508474 EFTUD2Q15029 972 aaKnown RBP eCLIP7.78□□□□□ -1.166e-8■■■■■ 34.9
UBE2D3-224ENST00000508474 R3HDM1Q15032 1099 aaKnown RBP7.78□□□□□ -1.16
UBE2D3-224ENST00000508474 LRRC24Q50LG9 513 aa7.78□□□□□ -1.16
UBE2D3-224ENST00000508474 IZUMO3Q5VZ72 239 aa7.78□□□□□ -1.16
UBE2D3-224ENST00000508474 CYFIP1Q7L576 1253 aa7.78□□□□□ -1.16
UBE2D3-224ENST00000508474 MB21D2Q8IYB1 491 aaPredicted RBP7.78□□□□□ -1.16
UBE2D3-224ENST00000508474 KCTD6Q8NC69 237 aa7.78□□□□□ -1.16
UBE2D3-224ENST00000508474 RBBP8NLQ8NC74 664 aaPredicted RBP7.78□□□□□ -1.16
UBE2D3-224ENST00000508474 ATL2Q8NHH9 583 aa7.78□□□□□ -1.16
UBE2D3-224ENST00000508474 MTRQ99707 1265 aa7.78□□□□□ -1.16
UBE2D3-224ENST00000508474 UBN1Q9NPG3 1134 aa7.78□□□□□ -1.16
UBE2D3-224ENST00000508474 FBXO2Q9UK22 296 aaPredicted RBP7.78□□□□□ -1.16
UBE2D3-224ENST00000508474 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.78□□□□□ -1.16
UBE2D3-224ENST00000508474 SAMD9LQ8IVG5 1584 aa7.78□□□□□ -1.16
UBE2D3-224ENST00000508474 PLEKHG3A1L390 1219 aa7.78□□□□□ -1.16
UBE2D3-224ENST00000508474 DDX39AO00148 427 aaKnown RBP7.78□□□□□ -1.16
UBE2D3-224ENST00000508474 OCRLQ01968 901 aa7.78□□□□□ -1.16
UBE2D3-224ENST00000508474 PABPC4Q13310 644 aaKnown RBP eCLIP7.78□□□□□ -1.161e-7■■■□□ 18.6
UBE2D3-224ENST00000508474 RCN1Q15293 331 aa7.78□□□□□ -1.16
UBE2D3-224ENST00000508474 CCDC80Q76M96 950 aa7.78□□□□□ -1.16
UBE2D3-224ENST00000508474 SYN2Q92777 582 aaPredicted RBP7.78□□□□□ -1.16
UBE2D3-224ENST00000508474 ARL8AQ96BM9 186 aa7.78□□□□□ -1.16
UBE2D3-224ENST00000508474 MAGEB18Q96M61 343 aa7.78□□□□□ -1.16
UBE2D3-224ENST00000508474 BRIP1Q9BX63 1249 aa7.78□□□□□ -1.16
UBE2D3-224ENST00000508474 AIPL1Q9NZN9 384 aa7.78□□□□□ -1.16
UBE2D3-224ENST00000508474 HESX1Q9UBX0 185 aa7.78□□□□□ -1.16
UBE2D3-224ENST00000508474 CNOT8Q9UFF9 292 aaKnown RBP7.78□□□□□ -1.16
UBE2D3-224ENST00000508474 CHEK2O96017 543 aa7.78□□□□□ -1.16
UBE2D3-224ENST00000508474 CASP2P42575 452 aa7.78□□□□□ -1.16
UBE2D3-224ENST00000508474 CACNA2D1P54289 1103 aa7.78□□□□□ -1.16
UBE2D3-224ENST00000508474 EIF6P56537 245 aaKnown RBP7.78□□□□□ -1.16
UBE2D3-224ENST00000508474 KRT17Q04695 432 aa7.78□□□□□ -1.16
UBE2D3-224ENST00000508474 GRIN1Q05586 938 aa7.78□□□□□ -1.16
UBE2D3-224ENST00000508474 RASGRF1Q13972 1273 aa7.78□□□□□ -1.16
UBE2D3-224ENST00000508474 INPP5AQ14642 412 aa7.78□□□□□ -1.16
UBE2D3-224ENST00000508474 NAB2Q15742 525 aa7.78□□□□□ -1.16
UBE2D3-224ENST00000508474 TBC1D9BQ66K14 1250 aa7.78□□□□□ -1.16
UBE2D3-224ENST00000508474 FUKQ8N0W3 1084 aa7.78□□□□□ -1.16
UBE2D3-224ENST00000508474 OR2W6PQ8NHA6 318 aa7.78□□□□□ -1.16
UBE2D3-224ENST00000508474 ZNF564Q8TBZ8 553 aaPredicted RBP7.78□□□□□ -1.16
UBE2D3-224ENST00000508474 SDR42E1Q8WUS8 393 aa7.78□□□□□ -1.16
UBE2D3-224ENST00000508474 FAF2Q96CS3 445 aa7.78□□□□□ -1.16
UBE2D3-224ENST00000508474 NACC1Q96RE7 527 aa7.78□□□□□ -1.16
UBE2D3-224ENST00000508474 UIMC1Q96RL1 719 aa7.78□□□□□ -1.16
UBE2D3-224ENST00000508474 ZC3H12CQ9C0D7 883 aaKnown RBP7.78□□□□□ -1.16
UBE2D3-224ENST00000508474 SEPT10Q9P0V9 454 aa7.78□□□□□ -1.16
UBE2D3-224ENST00000508474 DDX20Q9UHI6 824 aaKnown RBP7.78□□□□□ -1.16
UBE2D3-224ENST00000508474 BCORL1Q5H9F3 1711 aa7.78□□□□□ -1.16
UBE2D3-224ENST00000508474 B2RBV5 119 aa7.78□□□□□ -1.16
UBE2D3-224ENST00000508474 SASH3O75995 380 aa7.78□□□□□ -1.16
UBE2D3-224ENST00000508474 CFBP00751 764 aa7.78□□□□□ -1.16
UBE2D3-224ENST00000508474 CDC25AP30304 524 aa7.78□□□□□ -1.16
UBE2D3-224ENST00000508474 SERPINB8P50452 374 aa7.78□□□□□ -1.16
UBE2D3-224ENST00000508474 DPYDQ12882 1025 aa7.78□□□□□ -1.16
UBE2D3-224ENST00000508474 PDIA2Q13087 525 aaKnown RBP7.78□□□□□ -1.16
UBE2D3-224ENST00000508474 TRIM60Q495X7 471 aa7.78□□□□□ -1.16
UBE2D3-224ENST00000508474 GPATCH4Q5T3I0 446 aaKnown RBP7.78□□□□□ -1.16
UBE2D3-224ENST00000508474 ADCK1Q86TW2 530 aa7.78□□□□□ -1.16
UBE2D3-224ENST00000508474 HORMAD1Q86X24 394 aa7.78□□□□□ -1.16
UBE2D3-224ENST00000508474 TGFBRAP1Q8WUH2 860 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms