RNA–Protein interactions for RNA: ENST00000507273.5

RACK1-216, Transcript of receptor for activated C kinase 1, humanhuman

TSL 2

Gene RACK1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACK1-216ENST00000507273 PLVAPQ9BX97 442 aa9.34□□□□□ -0.91
RACK1-216ENST00000507273 GCOM2Q9BZD3 368 aaPredicted RBP9.34□□□□□ -0.91
RACK1-216ENST00000507273 CWH43Q9H720 699 aa9.34□□□□□ -0.91
RACK1-216ENST00000507273 MINDY3Q9H8M7 445 aa9.34□□□□□ -0.91
RACK1-216ENST00000507273 ANKEF1Q9NU02 776 aa9.34□□□□□ -0.91
RACK1-216ENST00000507273 TMEM161AQ9NX61 479 aa9.34□□□□□ -0.91
RACK1-216ENST00000507273 RWDD3Q9Y3V2 267 aa9.34□□□□□ -0.91
RACK1-216ENST00000507273 RBM19Q9Y4C8 960 aaKnown RBP9.34□□□□□ -0.91
RACK1-216ENST00000507273 PCDHB7Q9Y5E2 793 aa9.34□□□□□ -0.91
RACK1-216ENST00000507273 PCDHB6Q9Y5E3 794 aa9.34□□□□□ -0.91
RACK1-216ENST00000507273 COL4A3BPQ9Y5P4 624 aa9.34□□□□□ -0.91
RACK1-216ENST00000507273 A0A0U1RQF3 1178 aa9.33□□□□□ -0.92
RACK1-216ENST00000507273 TBKBP1A7MCY6 615 aa9.33□□□□□ -0.92
RACK1-216ENST00000507273 ITGB1P05556 798 aa9.33□□□□□ -0.92
RACK1-216ENST00000507273 OR52Z1P0C646 297 aa9.33□□□□□ -0.92
RACK1-216ENST00000507273 BMP1P13497 986 aa9.33□□□□□ -0.92
RACK1-216ENST00000507273 IBSPP21815 317 aaPredicted RBP9.33□□□□□ -0.92
RACK1-216ENST00000507273 GJB2P29033 226 aa9.33□□□□□ -0.92
RACK1-216ENST00000507273 HOXA11P31270 313 aaPredicted RBP9.33□□□□□ -0.92
RACK1-216ENST00000507273 ARL2P36404 184 aa9.33□□□□□ -0.92
RACK1-216ENST00000507273 RFC5P40937 340 aa9.33□□□□□ -0.92
RACK1-216ENST00000507273 TECP42680 631 aa9.33□□□□□ -0.92
RACK1-216ENST00000507273 MCM2P49736 904 aa9.33□□□□□ -0.92
RACK1-216ENST00000507273 DNM2P50570 870 aa9.33□□□□□ -0.92
RACK1-216ENST00000507273 KCNQ1P51787 676 aa9.33□□□□□ -0.92
RACK1-216ENST00000507273 POLGP54098 1239 aaPredicted RBP9.33□□□□□ -0.92
RACK1-216ENST00000507273 MRPS5P82675 430 aaKnown RBP9.33□□□□□ -0.92
RACK1-216ENST00000507273 LAMTOR4Q0VGL1 99 aa9.33□□□□□ -0.92
RACK1-216ENST00000507273 CLLU1OSQ5K130 101 aa9.33□□□□□ -0.92
RACK1-216ENST00000507273 OTUD6AQ7L8S5 288 aa9.33□□□□□ -0.92
RACK1-216ENST00000507273 FERMT3Q86UX7 667 aa9.33□□□□□ -0.92
RACK1-216ENST00000507273 SPPL3Q8TCT6 385 aa9.33□□□□□ -0.92
RACK1-216ENST00000507273 ASAP3Q8TDY4 903 aa9.33□□□□□ -0.92
RACK1-216ENST00000507273 PIGOQ8TEQ8 1089 aa9.33□□□□□ -0.92
RACK1-216ENST00000507273 SLC7A3Q8WY07 619 aa9.33□□□□□ -0.92
RACK1-216ENST00000507273 P2RX5Q93086 422 aa9.33□□□□□ -0.92
RACK1-216ENST00000507273 JPH2Q9BR39 696 aaPredicted RBP9.33□□□□□ -0.92
RACK1-216ENST00000507273 POLR3CQ9BUI4 534 aaPredicted RBP9.33□□□□□ -0.92
RACK1-216ENST00000507273 TRAIPQ9BWF2 469 aa9.33□□□□□ -0.92
RACK1-216ENST00000507273 ATP6V0A4Q9HBG4 840 aa9.33□□□□□ -0.92
RACK1-216ENST00000507273 ALG13Q9NP73 1137 aaKnown RBP9.33□□□□□ -0.92
RACK1-216ENST00000507273 LRFN2Q9ULH4 789 aa9.33□□□□□ -0.92
RACK1-216ENST00000507273 PLAGL2Q9UPG8 496 aa9.33□□□□□ -0.92
RACK1-216ENST00000507273 NCOR1O75376 2440 aa9.32□□□□□ -0.92
RACK1-216ENST00000507273 C5orf42Q9H799 3197 aa9.32□□□□□ -0.92
RACK1-216ENST00000507273 MEIS3P2A8K0S8 358 aa9.32□□□□□ -0.92
RACK1-216ENST00000507273 GAS2O43903 313 aaKnown RBP9.32□□□□□ -0.92
RACK1-216ENST00000507273 DGAT1O75907 488 aa9.32□□□□□ -0.92
RACK1-216ENST00000507273 XRCC6P12956 609 aaKnown RBP eCLIP9.32□□□□□ -0.92
RACK1-216ENST00000507273 GLRA2P23416 452 aa9.32□□□□□ -0.92
RACK1-216ENST00000507273 IRS1P35568 1242 aa9.32□□□□□ -0.92
RACK1-216ENST00000507273 PHKA2P46019 1235 aa9.32□□□□□ -0.92
RACK1-216ENST00000507273 FXR2P51116 673 aaKnown RBP eCLIP9.32□□□□□ -0.92
RACK1-216ENST00000507273 CUL4AQ13619 759 aa9.32□□□□□ -0.92
RACK1-216ENST00000507273 SKIV2LQ15477 1246 aaKnown RBP9.32□□□□□ -0.92
RACK1-216ENST00000507273 PTPROQ16827 1216 aa9.32□□□□□ -0.92
RACK1-216ENST00000507273 TIGD5Q53EQ6 642 aa9.32□□□□□ -0.92
RACK1-216ENST00000507273 TCEAL5Q5H9L2 206 aa9.32□□□□□ -0.92
RACK1-216ENST00000507273 UBXN11Q5T124 520 aa9.32□□□□□ -0.92
RACK1-216ENST00000507273 POTEGQ6S5H5 508 aa9.32□□□□□ -0.92
RACK1-216ENST00000507273 IFNLR1Q8IU57 520 aaPredicted RBP9.32□□□□□ -0.92
RACK1-216ENST00000507273 IGSF22Q8N9C0 903 aa9.32□□□□□ -0.92
RACK1-216ENST00000507273 KLHL23Q8NBE8 558 aa9.32□□□□□ -0.92
RACK1-216ENST00000507273 PSPC1Q8WXF1 523 aaKnown RBP9.32□□□□□ -0.92
RACK1-216ENST00000507273 HLA-CQ95604 372 aa9.32□□□□□ -0.92
RACK1-216ENST00000507273 SCLT1Q96NL6 688 aa9.32□□□□□ -0.92
RACK1-216ENST00000507273 MTRQ99707 1265 aa9.32□□□□□ -0.92
RACK1-216ENST00000507273 C11orf84Q9BUA3 381 aaPredicted RBP9.32□□□□□ -0.92
RACK1-216ENST00000507273 TMEM117Q9H0C3 514 aa9.32□□□□□ -0.92
RACK1-216ENST00000507273 LMAN2LQ9H0V9 348 aa9.32□□□□□ -0.92
RACK1-216ENST00000507273 TUFT1Q9NNX1 390 aa9.32□□□□□ -0.92
RACK1-216ENST00000507273 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.32□□□□□ -0.92
RACK1-216ENST00000507273 CHST12Q9NRB3 414 aa9.32□□□□□ -0.92
RACK1-216ENST00000507273 AGPAT5Q9NUQ2 364 aa9.32□□□□□ -0.92
RACK1-216ENST00000507273 TYW1Q9NV66 732 aaKnown RBP9.32□□□□□ -0.92
RACK1-216ENST00000507273 COG5Q9UP83 839 aa9.32□□□□□ -0.92
RACK1-216ENST00000507273 TDRD15B5MCY1 1934 aaKnown RBP9.32□□□□□ -0.92
RACK1-216ENST00000507273 MYH15Q9Y2K3 1946 aa9.32□□□□□ -0.92
RACK1-216ENST00000507273 MYH11P35749 1972 aa9.32□□□□□ -0.92
RACK1-216ENST00000507273 EOMESO95936 686 aa9.31□□□□□ -0.92
RACK1-216ENST00000507273 SRGAP2CP0DJJ0 459 aa9.31□□□□□ -0.92
RACK1-216ENST00000507273 ZSCAN20P17040 1043 aaPredicted RBP9.31□□□□□ -0.92
RACK1-216ENST00000507273 SFPQP23246 707 aaKnown RBP eCLIP9.31□□□□□ -0.92
RACK1-216ENST00000507273 RPA1P27694 616 aa9.31□□□□□ -0.92
RACK1-216ENST00000507273 LTBRP36941 435 aa9.31□□□□□ -0.92
RACK1-216ENST00000507273 PTENP60484 403 aa9.31□□□□□ -0.92
RACK1-216ENST00000507273 POU5F1BQ06416 359 aa9.31□□□□□ -0.92
RACK1-216ENST00000507273 HYAL1Q12794 435 aa9.31□□□□□ -0.92
RACK1-216ENST00000507273 PTGDRQ13258 359 aa9.31□□□□□ -0.92
RACK1-216ENST00000507273 CAPSQ13938 189 aa9.31□□□□□ -0.92
RACK1-216ENST00000507273 AMHR2Q16671 573 aa9.31□□□□□ -0.92
RACK1-216ENST00000507273 CTC1Q2NKJ3 1217 aa9.31□□□□□ -0.92
RACK1-216ENST00000507273 NAALADL2Q58DX5 795 aa9.31□□□□□ -0.92
RACK1-216ENST00000507273 CATSPER4Q7RTX7 472 aa9.31□□□□□ -0.92
RACK1-216ENST00000507273 SRGAP1Q7Z6B7 1085 aa9.31□□□□□ -0.92
RACK1-216ENST00000507273 EXOC8Q8IYI6 725 aa9.31□□□□□ -0.92
RACK1-216ENST00000507273 COLGALT1Q8NBJ5 622 aa9.31□□□□□ -0.92
RACK1-216ENST00000507273 RNF149Q8NC42 400 aa9.31□□□□□ -0.92
RACK1-216ENST00000507273 POF1BQ8WVV4 589 aa9.31□□□□□ -0.92
RACK1-216ENST00000507273 TCP11Q8WWU5 503 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms