RNA–Protein interactions for RNA: ENST00000504951.6

GYPB-204, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-204ENST00000504951 DENND3A2RUS2 1198 aa6.89□□□□□ -1.31
GYPB-204ENST00000504951 KRBA1A5PL33 1030 aa6.89□□□□□ -1.31
GYPB-204ENST00000504951 ZNF213O14771 459 aa6.89□□□□□ -1.31
GYPB-204ENST00000504951 ACTN4O43707 911 aaKnown RBP6.89□□□□□ -1.31
GYPB-204ENST00000504951 TBC1D4O60343 1298 aa6.89□□□□□ -1.31
GYPB-204ENST00000504951 KINO60870 393 aaKnown RBP6.89□□□□□ -1.31
GYPB-204ENST00000504951 LILRB5O75023 590 aa6.89□□□□□ -1.31
GYPB-204ENST00000504951 LRP3O75074 770 aa6.89□□□□□ -1.31
GYPB-204ENST00000504951 ATP9AO75110 1047 aa6.89□□□□□ -1.31
GYPB-204ENST00000504951 CXCL14O95715 111 aa6.89□□□□□ -1.31
GYPB-204ENST00000504951 CTSAP10619 480 aa6.89□□□□□ -1.31
GYPB-204ENST00000504951 SRFP11831 508 aa6.89□□□□□ -1.31
GYPB-204ENST00000504951 CRYBB1P53674 252 aaPredicted RBP6.89□□□□□ -1.31
GYPB-204ENST00000504951 STARD6P59095 220 aa6.89□□□□□ -1.31
GYPB-204ENST00000504951 SEC23AQ15436 765 aa6.89□□□□□ -1.31
GYPB-204ENST00000504951 LETM2Q2VYF4 491 aa6.89□□□□□ -1.31
GYPB-204ENST00000504951 LLGL2Q6P1M3 1020 aa6.89□□□□□ -1.31
GYPB-204ENST00000504951 MTHFD1LQ6UB35 978 aa6.89□□□□□ -1.31
GYPB-204ENST00000504951 RSPO2Q6UXX9 243 aaPredicted RBP6.89□□□□□ -1.31
GYPB-204ENST00000504951 CCDC149Q6ZUS6 474 aa6.89□□□□□ -1.31
GYPB-204ENST00000504951 DDX53Q86TM3 631 aaKnown RBP6.89□□□□□ -1.31
GYPB-204ENST00000504951 KIAA0319LQ8IZA0 1049 aa6.89□□□□□ -1.31
GYPB-204ENST00000504951 MAML2Q8IZL2 1156 aaPredicted RBP6.89□□□□□ -1.31
GYPB-204ENST00000504951 STAG2Q8N3U4 1231 aa6.89□□□□□ -1.31
GYPB-204ENST00000504951 HDAC7Q8WUI4 952 aa6.89□□□□□ -1.31
GYPB-204ENST00000504951 SECISBP2LQ93073 1101 aaKnown RBP6.89□□□□□ -1.31
GYPB-204ENST00000504951 PCYT2Q99447 389 aa6.89□□□□□ -1.31
GYPB-204ENST00000504951 MAP3K14Q99558 947 aa6.89□□□□□ -1.31
GYPB-204ENST00000504951 DDX23Q9BUQ8 820 aaKnown RBP6.89□□□□□ -1.31
GYPB-204ENST00000504951 TRAIPQ9BWF2 469 aa6.89□□□□□ -1.31
GYPB-204ENST00000504951 FAM126AQ9BYI3 521 aaPredicted RBP6.89□□□□□ -1.31
GYPB-204ENST00000504951 ZBP1Q9H171 429 aa6.89□□□□□ -1.31
GYPB-204ENST00000504951 SFXN1Q9H9B4 322 aa6.89□□□□□ -1.31
GYPB-204ENST00000504951 RNF19AQ9NV58 838 aa6.89□□□□□ -1.31
GYPB-204ENST00000504951 DPP7Q9UHL4 492 aa6.89□□□□□ -1.31
GYPB-204ENST00000504951 FBXL21Q9UKT6 434 aa6.89□□□□□ -1.31
GYPB-204ENST00000504951 SIT1Q9Y3P8 196 aa6.89□□□□□ -1.31
GYPB-204ENST00000504951 NOC2LQ9Y3T9 749 aaKnown RBP6.89□□□□□ -1.31
GYPB-204ENST00000504951 TELO2Q9Y4R8 837 aa6.89□□□□□ -1.31
GYPB-204ENST00000504951 UBIAD1Q9Y5Z9 338 aa6.89□□□□□ -1.31
GYPB-204ENST00000504951 R4GN57 208 aa6.89□□□□□ -1.31
GYPB-204ENST00000504951 NFASCO94856 1347 aa6.89□□□□□ -1.31
GYPB-204ENST00000504951 NEDD4P46934 1319 aa6.89□□□□□ -1.31
GYPB-204ENST00000504951 COL1A2P08123 1366 aa6.89□□□□□ -1.31
GYPB-204ENST00000504951 DENND4AQ7Z401 1863 aa6.89□□□□□ -1.31
GYPB-204ENST00000504951 USP24Q9UPU5 2620 aa6.89□□□□□ -1.31
GYPB-204ENST00000504951 FRYLO94915 3013 aa6.88□□□□□ -1.31
GYPB-204ENST00000504951 A0A0U1RQF3 1178 aa6.88□□□□□ -1.31
GYPB-204ENST00000504951 MEIS2O14770 477 aa6.88□□□□□ -1.31
GYPB-204ENST00000504951 HBP1O60381 514 aa6.88□□□□□ -1.31
GYPB-204ENST00000504951 SORBS3O60504 671 aa6.88□□□□□ -1.31
GYPB-204ENST00000504951 FOXD2O60548 495 aaPredicted RBP6.88□□□□□ -1.31
GYPB-204ENST00000504951 LILRB3O75022 631 aa6.88□□□□□ -1.31
GYPB-204ENST00000504951 CSPG5O95196 566 aa6.88□□□□□ -1.31
GYPB-204ENST00000504951 ALDH7A1P49419 539 aaKnown RBP6.88□□□□□ -1.31
GYPB-204ENST00000504951 SHC2P98077 582 aa6.88□□□□□ -1.31
GYPB-204ENST00000504951 APOBRQ0VD83 1088 aa6.88□□□□□ -1.31
GYPB-204ENST00000504951 NFX1Q12986 1120 aaKnown RBP6.88□□□□□ -1.31
GYPB-204ENST00000504951 PLCB4Q15147 1175 aa6.88□□□□□ -1.31
GYPB-204ENST00000504951 RARS2Q5T160 578 aaKnown RBP6.88□□□□□ -1.31
GYPB-204ENST00000504951 FCHSD1Q86WN1 690 aa6.88□□□□□ -1.31
GYPB-204ENST00000504951 GPR65Q8IYL9 337 aa6.88□□□□□ -1.31
GYPB-204ENST00000504951 SLC44A3Q8N4M1 653 aa6.88□□□□□ -1.31
GYPB-204ENST00000504951 SHDQ96IW2 340 aa6.88□□□□□ -1.31
GYPB-204ENST00000504951 MRPL9Q9BYD2 267 aaKnown RBP6.88□□□□□ -1.31
GYPB-204ENST00000504951 KRT23Q9C075 422 aa6.88□□□□□ -1.31
GYPB-204ENST00000504951 LNPKQ9C0E8 428 aa6.88□□□□□ -1.31
GYPB-204ENST00000504951 FAM49AQ9H0Q0 323 aaPredicted RBP6.88□□□□□ -1.31
GYPB-204ENST00000504951 EPC1Q9H2F5 836 aa6.88□□□□□ -1.31
GYPB-204ENST00000504951 AZI2Q9H6S1 392 aa6.88□□□□□ -1.31
GYPB-204ENST00000504951 TMEM134Q9H6X4 195 aa6.88□□□□□ -1.31
GYPB-204ENST00000504951 CNNM2Q9H8M5 875 aa6.88□□□□□ -1.31
GYPB-204ENST00000504951 WDR6Q9NNW5 1121 aaKnown RBP6.88□□□□□ -1.31
GYPB-204ENST00000504951 JADE2Q9NQC1 790 aa6.88□□□□□ -1.31
GYPB-204ENST00000504951 RTEL1Q9NZ71 1219 aa6.88□□□□□ -1.31
GYPB-204ENST00000504951 CDH22Q9UJ99 828 aa6.88□□□□□ -1.31
GYPB-204ENST00000504951 ZFP37Q9Y6Q3 630 aaPredicted RBP6.88□□□□□ -1.31
GYPB-204ENST00000504951 PKD1L2Q7Z442 2459 aa6.88□□□□□ -1.31
GYPB-204ENST00000504951 ANHXE9PGG2 379 aa6.87□□□□□ -1.31
GYPB-204ENST00000504951 SLC30A4O14863 429 aa6.87□□□□□ -1.31
GYPB-204ENST00000504951 CYTH3O43739 400 aa6.87□□□□□ -1.31
GYPB-204ENST00000504951 DHX16O60231 1041 aaKnown RBP6.87□□□□□ -1.31
GYPB-204ENST00000504951 GPR32O75388 356 aa6.87□□□□□ -1.31
GYPB-204ENST00000504951 NR1I2O75469 434 aa6.87□□□□□ -1.31
GYPB-204ENST00000504951 ADH1BP00325 375 aa6.87□□□□□ -1.31
GYPB-204ENST00000504951 ARP10275 920 aa6.87□□□□□ -1.31
GYPB-204ENST00000504951 ITGB5P18084 799 aa6.87□□□□□ -1.31
GYPB-204ENST00000504951 SP100P23497 879 aaPredicted RBP6.87□□□□□ -1.31
GYPB-204ENST00000504951 KLRC1P26715 233 aa6.87□□□□□ -1.31
GYPB-204ENST00000504951 STAT5BP51692 787 aa6.87□□□□□ -1.31
GYPB-204ENST00000504951 TROAPQ12815 778 aa6.87□□□□□ -1.31
GYPB-204ENST00000504951 HDAC1Q13547 482 aaPredicted RBP6.87□□□□□ -1.31
GYPB-204ENST00000504951 GRM4Q14833 912 aa6.87□□□□□ -1.31
GYPB-204ENST00000504951 SLC35G1Q2M3R5 365 aa6.87□□□□□ -1.31
GYPB-204ENST00000504951 ZNF484Q5JVG2 852 aa6.87□□□□□ -1.31
GYPB-204ENST00000504951 IFIT1BQ5T764 474 aaKnown RBP6.87□□□□□ -1.31
GYPB-204ENST00000504951 CABP7Q86V35 215 aa6.87□□□□□ -1.31
GYPB-204ENST00000504951 ECHDC2Q86YB7 292 aa6.87□□□□□ -1.31
GYPB-204ENST00000504951 DCLK2Q8N568 766 aa6.87□□□□□ -1.31
GYPB-204ENST00000504951 TMEM40Q8WWA1 233 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms