RNA–Protein interactions for RNA: ENST00000503974.5

PDLIM5-207, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 2,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-207ENST00000503974 CNGA3Q16281 694 aa10.43□□□□□ -0.74
PDLIM5-207ENST00000503974 RNF187Q5TA31 235 aaPredicted RBP10.43□□□□□ -0.74
PDLIM5-207ENST00000503974 CCSAPQ6IQ19 270 aaPredicted RBP10.43□□□□□ -0.74
PDLIM5-207ENST00000503974 BPHLQ86WA6 291 aaPredicted RBP10.43□□□□□ -0.74
PDLIM5-207ENST00000503974 NSUN7Q8NE18 718 aaKnown RBP10.43□□□□□ -0.74
PDLIM5-207ENST00000503974 KIFC2Q96AC6 838 aa10.43□□□□□ -0.74
PDLIM5-207ENST00000503974 PNKPQ96T60 521 aa10.43□□□□□ -0.74
PDLIM5-207ENST00000503974 SH3GL2Q99962 352 aa10.43□□□□□ -0.74
PDLIM5-207ENST00000503974 LRRC27Q9C0I9 530 aa10.43□□□□□ -0.74
PDLIM5-207ENST00000503974 DMAP1Q9NPF5 467 aaPredicted RBP10.43□□□□□ -0.74
PDLIM5-207ENST00000503974 INIPQ9NRY2 104 aa10.43□□□□□ -0.74
PDLIM5-207ENST00000503974 HAUS2Q9NVX0 235 aa10.43□□□□□ -0.74
PDLIM5-207ENST00000503974 IMPACTQ9P2X3 320 aa10.43□□□□□ -0.74
PDLIM5-207ENST00000503974 RBPJLQ9UBG7 517 aa10.43□□□□□ -0.74
PDLIM5-207ENST00000503974 RABGAP1Q9Y3P9 1069 aa10.43□□□□□ -0.74
PDLIM5-207ENST00000503974 RBBP6Q7Z6E9 1792 aaKnown RBP10.43□□□□□ -0.74
PDLIM5-207ENST00000503974 TMEM110-MUSTN1A8MSY1 372 aa10.43□□□□□ -0.74
PDLIM5-207ENST00000503974 MAP3K13O43283 966 aa10.43□□□□□ -0.74
PDLIM5-207ENST00000503974 CLTAP09496 248 aa10.43□□□□□ -0.74
PDLIM5-207ENST00000503974 CCDC159P0C7I6 412 aa10.43□□□□□ -0.74
PDLIM5-207ENST00000503974 GSTM4Q03013 218 aa10.43□□□□□ -0.74
PDLIM5-207ENST00000503974 IKQ13123 557 aaPredicted RBP10.43□□□□□ -0.74
PDLIM5-207ENST00000503974 CRHR2Q13324 411 aa10.43□□□□□ -0.74
PDLIM5-207ENST00000503974 FAM110CQ1W6H9 321 aa10.43□□□□□ -0.74
PDLIM5-207ENST00000503974 C6orf89Q6UWU4 347 aa10.43□□□□□ -0.74
PDLIM5-207ENST00000503974 C17orf99Q6UX52 265 aa10.43□□□□□ -0.74
PDLIM5-207ENST00000503974 WDR75Q8IWA0 830 aaKnown RBP10.43□□□□□ -0.74
PDLIM5-207ENST00000503974 CMTR1Q8N1G2 835 aaKnown RBP10.43□□□□□ -0.74
PDLIM5-207ENST00000503974 TMCO5AQ8N6Q1 288 aa10.43□□□□□ -0.74
PDLIM5-207ENST00000503974 NECAB1Q8N987 351 aa10.43□□□□□ -0.74
PDLIM5-207ENST00000503974 UIMC1Q96RL1 719 aa10.43□□□□□ -0.74
PDLIM5-207ENST00000503974 LLPHQ9BRT6 129 aaKnown RBP10.43□□□□□ -0.74
PDLIM5-207ENST00000503974 TNMDQ9H2S6 317 aa10.43□□□□□ -0.74
PDLIM5-207ENST00000503974 ZFYVE28Q9HCC9 887 aa10.43□□□□□ -0.74
PDLIM5-207ENST00000503974 TXNRD2Q9NNW7 524 aa10.43□□□□□ -0.74
PDLIM5-207ENST00000503974 COMMD8Q9NX08 183 aa10.43□□□□□ -0.74
PDLIM5-207ENST00000503974 RNF186Q9NXI6 227 aa10.43□□□□□ -0.74
PDLIM5-207ENST00000503974 BTBD7Q9P203 1132 aa10.43□□□□□ -0.74
PDLIM5-207ENST00000503974 COMMD10Q9Y6G5 202 aa10.43□□□□□ -0.74
PDLIM5-207ENST00000503974 SLC30A1Q9Y6M5 507 aa10.43□□□□□ -0.74
PDLIM5-207ENST00000503974 ZBTB5O15062 677 aa10.42□□□□□ -0.74
PDLIM5-207ENST00000503974 PRPF3O43395 683 aaKnown RBP10.42□□□□□ -0.74
PDLIM5-207ENST00000503974 PFDN1O60925 122 aa10.42□□□□□ -0.74
PDLIM5-207ENST00000503974 SUPT3HO75486 399 aa10.42□□□□□ -0.74
PDLIM5-207ENST00000503974 ICAM1P05362 532 aa10.42□□□□□ -0.74
PDLIM5-207ENST00000503974 RIPK1Q13546 671 aa10.42□□□□□ -0.74
PDLIM5-207ENST00000503974 ITGA7Q13683 1181 aa10.42□□□□□ -0.74
PDLIM5-207ENST00000503974 TMEM132BQ14DG7 1078 aa10.42□□□□□ -0.74
PDLIM5-207ENST00000503974 SGSM1Q2NKQ1 1148 aa10.42□□□□□ -0.74
PDLIM5-207ENST00000503974 QRICH1Q2TAL8 776 aa10.42□□□□□ -0.74
PDLIM5-207ENST00000503974 AGAP9Q5VTM2 703 aa10.42□□□□□ -0.74
PDLIM5-207ENST00000503974 CCDC83Q8IWF9 413 aa10.42□□□□□ -0.74
PDLIM5-207ENST00000503974 KRI1Q8N9T8 703 aaKnown RBP10.42□□□□□ -0.74
PDLIM5-207ENST00000503974 ZNF653Q96CK0 615 aa10.42□□□□□ -0.74
PDLIM5-207ENST00000503974 MPP4Q96JB8 637 aa10.42□□□□□ -0.74
PDLIM5-207ENST00000503974 PIGSQ96S52 555 aa10.42□□□□□ -0.74
PDLIM5-207ENST00000503974 SRPK1Q96SB4 655 aaKnown RBP10.42□□□□□ -0.74
PDLIM5-207ENST00000503974 VCX3BQ9H321 246 aa10.42□□□□□ -0.74
PDLIM5-207ENST00000503974 C6orf203Q9P0P8 240 aaPredicted RBP10.42□□□□□ -0.74
PDLIM5-207ENST00000503974 BAZ2BQ9UIF8 2168 aaKnown RBP10.42□□□□□ -0.74
PDLIM5-207ENST00000503974 PNMA6FA0A0J9YX94 578 aa10.42□□□□□ -0.74
PDLIM5-207ENST00000503974 CPLX1O14810 134 aa10.42□□□□□ -0.74
PDLIM5-207ENST00000503974 PPP1R11O60927 126 aaPredicted RBP10.42□□□□□ -0.74
PDLIM5-207ENST00000503974 ZBED4O75132 1171 aa10.42□□□□□ -0.74
PDLIM5-207ENST00000503974 HSPA8P11142 646 aaKnown RBP10.42□□□□□ -0.74
PDLIM5-207ENST00000503974 PMS2P54278 862 aa10.42□□□□□ -0.74
PDLIM5-207ENST00000503974 ITIH3Q06033 890 aa10.42□□□□□ -0.74
PDLIM5-207ENST00000503974 INAQ16352 499 aa10.42□□□□□ -0.74
PDLIM5-207ENST00000503974 TRIM50Q86XT4 487 aa10.42□□□□□ -0.74
PDLIM5-207ENST00000503974 DYDC1Q8WWB3 177 aa10.42□□□□□ -0.74
PDLIM5-207ENST00000503974 ABHD8Q96I13 439 aa10.42□□□□□ -0.74
PDLIM5-207ENST00000503974 ZMAT2Q96NC0 199 aaKnown RBP10.42□□□□□ -0.74
PDLIM5-207ENST00000503974 BPIFA3Q9BQP9 254 aa10.42□□□□□ -0.74
PDLIM5-207ENST00000503974 RHBDL2Q9NX52 303 aa10.42□□□□□ -0.74
PDLIM5-207ENST00000503974 WBP1LQ9NX94 342 aa10.42□□□□□ -0.74
PDLIM5-207ENST00000503974 NOP53Q9NZM5 478 aaKnown RBP10.42□□□□□ -0.74
PDLIM5-207ENST00000503974 KIAA1468Q9P260 1216 aa10.42□□□□□ -0.74
PDLIM5-207ENST00000503974 CARD8Q9Y2G2 431 aa10.42□□□□□ -0.74
PDLIM5-207ENST00000503974 ZNF236Q9UL36 1845 aa10.41□□□□□ -0.74
PDLIM5-207ENST00000503974 hCG_1984214I3L0E3 225 aa10.41□□□□□ -0.74
PDLIM5-207ENST00000503974 SLC26A4O43511 780 aa10.41□□□□□ -0.74
PDLIM5-207ENST00000503974 MYBL1P10243 752 aa10.41□□□□□ -0.74
PDLIM5-207ENST00000503974 SCG2P13521 617 aa10.41□□□□□ -0.74
PDLIM5-207ENST00000503974 ZNF165P49910 485 aa10.41□□□□□ -0.74
PDLIM5-207ENST00000503974 ERVK-9P63128 1117 aa10.41□□□□□ -0.74
PDLIM5-207ENST00000503974 ERVK-24P63145 666 aa10.41□□□□□ -0.74
PDLIM5-207ENST00000503974 SKOR1P84550 965 aa10.41□□□□□ -0.74
PDLIM5-207ENST00000503974 SPDYCQ5MJ68 293 aa10.41□□□□□ -0.74
PDLIM5-207ENST00000503974 ZNF362Q5T0B9 420 aaPredicted RBP10.41□□□□□ -0.74
PDLIM5-207ENST00000503974 RBM43Q6ZSC3 357 aaKnown RBP10.41□□□□□ -0.74
PDLIM5-207ENST00000503974 RIOX2Q8IUF8 465 aa10.41□□□□□ -0.74
PDLIM5-207ENST00000503974 ZNF713Q8N859 430 aaPredicted RBP10.41□□□□□ -0.74
PDLIM5-207ENST00000503974 PHKBQ93100 1093 aa10.41□□□□□ -0.74
PDLIM5-207ENST00000503974 RRP36Q96EU6 259 aaKnown RBP10.41□□□□□ -0.74
PDLIM5-207ENST00000503974 TEX13BQ9BXU2 312 aa10.41□□□□□ -0.74
PDLIM5-207ENST00000503974 SPATC1LQ9H0A9 340 aa10.41□□□□□ -0.74
PDLIM5-207ENST00000503974 R3HDMLQ9H3Y0 253 aa10.41□□□□□ -0.74
PDLIM5-207ENST00000503974 RABEP2Q9H5N1 569 aa10.41□□□□□ -0.74
PDLIM5-207ENST00000503974 MGAMO43451 1857 aa10.4□□□□□ -0.74
PDLIM5-207ENST00000503974 SMCHD1A6NHR9 2005 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms